Mercurial > repos > iracooke > msgfplus

diff msgfplus_search.xml @ 7:b3f2bd49029c

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Uploaded
author iracooke
date Tue, 05 Mar 2013 00:20:42 -0500
parents 366e62d86881
children 4f6cbe948065
line wrap: on
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--- a/msgfplus_search.xml	Mon Mar 04 21:44:52 2013 -0500
+++ b/msgfplus_search.xml	Tue Mar 05 00:20:42 2013 -0500
@@ -1,7 +1,7 @@
-<tool id="proteomics_search_msgfplus_1" name="MSGF+ MSMS Search" version="1.0.0">
+<tool id="proteomics_search_msgfplus_1" name="MSGF+ MSMS Search" version="1.0.1">
 
 	<requirements>
-    	<requirement type="package" version="1.1.9">galaxy_protk</requirement>
+    	<requirement type="package" version="1.2.0">galaxy_protk</requirement>
     	<requirement type="package" version="20130227">msgfplus</requirement>
     	<requirement type="package" version="3_0_4388">proteowizard</requirement>
    	</requirements>
@@ -11,8 +11,8 @@
 
 	<command>
 		#if $database.source_select=="built_in":
-		rvm 1.9.3@protk-1.1.9 do msgfplus_search.rb --galaxy -d $database.dbkey
-		#else #rvm 1.9.3@protk-1.1.9 do msgfplus_search.rb -d $database.fasta_file
+		rvm 1.9.3@protk-1.2.0 do msgfplus_search.rb --galaxy -d $database.dbkey
+		#else #rvm 1.9.3@protk-1.2.0 do msgfplus_search.rb --galaxy -d $database.fasta_file
 		#end if
 
 		--var-mods='