Mercurial > repos > iracooke > package_omssa_2_1_9

annotate tool_dependencies.xml @ 1:37b03930c6a2 draft default tip

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planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit b'864b3f087fff3a7cb18b2c0dd61442c2495e5b98\n'-dirty
author iracooke
date Fri, 22 Dec 2017 21:04:43 -0500
parents 986d3f456c59
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986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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1 <?xml version="1.0"?>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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2 <tool_dependency>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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3 <package name="omssa" version="2.1.9">
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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4 <install version="1.0">
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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5 <actions>
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37b03930c6a2 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit b'864b3f087fff3a7cb18b2c0dd61442c2495e5b98\n'-dirty
iracooke
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6 <action type="download_by_url">https://s3.amazonaws.com/galaxy-protk/omssa_2.1.9.tar.gz</action>
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986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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7 <action language="cheetah" type="template_command">
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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8 sh install.sh $env.INSTALL_DIR
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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9 </action>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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10 <action type="set_environment">
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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12 <environment_variable action="set_to" name="PROTK_OMSSA_ROOT">$INSTALL_DIR</environment_variable>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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13 </action>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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14 </actions>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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15 </install>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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16 <readme>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
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17 Downloads prebuilt binaries of the OMSSA search engine from NCBI
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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18 </readme>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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19 </package>
986d3f456c59 planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/packages/package_omssa_2_1_9 commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
iracooke
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20 </tool_dependency>