Mercurial > repos > iracooke > package_peptideshaker_0_38

changeset 0:958037b48c33 draft default tip

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planemo upload commit 0e976aeeed9d516e0ad4735dc847b1f2eba3532b
author iracooke
date Sun, 31 May 2015 09:05:27 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Sun May 31 09:05:27 2015 -0400
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="peptide_shaker" version="0.38">
+    <install version="1.0">
+        <actions>
+            <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/0.38.2/PeptideShaker-0.38.2.zip</action>
+            <action type="move_directory_files">
+                <source_directory>.</source_directory>
+                <destination_directory>$INSTALL_DIR/</destination_directory>
+            </action>
+            <action type="set_environment">
+                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-0.38.2.jar</environment_variable>
+            </action>
+        </actions>
+    </install>
+    <readme>
+        Install Galaxy package application for PeptideShaker 0.38
+        http://peptide-shaker.googlecode.com 
+    </readme>
+  </package>
+</tool_dependency>