Mercurial > repos > iracooke > proteomics_datatypes
comparison display_applications/proteomics/mzML.xml @ 9:6ca516faacfc draft
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| author | iracooke |
|---|---|
| date | Thu, 05 Jun 2014 18:08:35 -0400 |
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| 8:58469754fd82 | 9:6ca516faacfc |
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| 1 <display id="proteomics_mzml" version="1.0.2" name="view mzML data"> | |
| 2 <dynamic_links from_file="tool-data/protk_display_site.txt" skip_startswith="#" id="0" name="0"> | |
| 3 <!-- Define parameters by column from file --> | |
| 4 <dynamic_param name="site_id" value="0"/> | |
| 5 <dynamic_param name="site_url" value="1"/> | |
| 6 <!-- We define url and params as normal, but values defined in dynamic_param are available by specified name --> | |
| 7 <url target_frame="galaxy_main">${site_url}/init_local?file=${encoded_filename.qp}&type=mzml</url> | |
| 8 <param type="data" name="raw_file" viewable="False" format="mzml"/> | |
| 9 <param type="data" dataset="raw_file" name="mzml_file" format="mzml" viewable="False" /> | |
| 10 <param type="template" name="encoded_filename" strip="True" > | |
| 11 #import binascii | |
| 12 ${binascii.hexlify( $mzml_file.file_name )} | |
| 13 </param> | |
| 14 <param type="template" name="galaxy_url" strip="True" > | |
| 15 ${BASE_URL.split(":")[1][2:]} | |
| 16 </param> | |
| 17 </dynamic_links> | |
| 18 </display> |