Mercurial > repos > iracooke > proteomics_datatypes

diff datatypes_conf.xml @ 0:c10a62c886b8

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author iracooke
date Sun, 06 Jan 2013 19:07:22 -0500
parents
children 09b89b345de2
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/datatypes_conf.xml	Sun Jan 06 19:07:22 2013 -0500
@@ -0,0 +1,48 @@
+<?xml version="1.0"?>
+<datatypes>
+  <datatype_files>
+    <datatype_file name="proteomics.py"/>
+  </datatype_files>		
+  <registration display_path="display_applications">	
+    <datatype extension="pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" display_in_upload="true">
+      <display file="proteomics/PepXml.xml" />
+    </datatype>
+    <datatype extension="raw_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true">
+      <display file="proteomics/PepXml.xml" />
+    </datatype>
+    <datatype extension="peptideprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true">
+      <display file="proteomics/PepXml.xml" />
+    </datatype>
+    <datatype extension="interprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true">
+      <display file="proteomics/PepXml.xml" />
+    </datatype>
+    <datatype extension="protxml" type="galaxy.datatypes.proteomics:ProtXML" display_in_upload="true" >
+      <display file="proteomics/ProtXml.xml"/>
+    </datatype>
+    <datatype extension="mascotdat" type="galaxy.datatypes.proteomics:MascotDat" display_in_upload="false" />
+    <datatype extension="mzml" type="galaxy.datatypes.proteomics:MzML" mimetype="application/xml" display_in_upload="true">
+      <display file="proteomics/mzML.xml"/>
+    </datatype>
+    <datatype extension="mgf" type="galaxy.datatypes.proteomics:Mgf" display_in_upload="true" />		
+    <datatype extension="xls" type="galaxy.datatypes.proteomics:Xls" display_in_upload="true" />
+    <datatype extension="mzxml" type="galaxy.datatypes.proteomics:MzXML" mimetype="application/xml" display_in_upload="true" />
+    <datatype extension="mzq" type="galaxy.datatypes.proteomics:MzQuantML" mimetype="application/xml" display_in_upload="true" />
+    <datatype extension="mzid" type="galaxy.datatypes.proteomics:MzIdentML" mimetype="application/xml" display_in_upload="true" />
+    <datatype extension="traML" type="galaxy.datatypes.proteomics:TraML" mimetype="application/xml" display_in_upload="true" />
+    <datatype extension="raw" type="galaxy.datatypes.proteomics:RAW" display_in_upload="true" />
+    <datatype extension="msp" type="galaxy.datatypes.proteomics:Msp" display_in_upload="true" />
+    <datatype extension="ms2" type="galaxy.datatypes.proteomics:Ms2" display_in_upload="true" />
+    <datatype extension="hlf" type="galaxy.datatypes.proteomics:XHunterAslFormat" display_in_upload="true" />
+  </registration>
+  <sniffers>
+    <sniffer type="galaxy.datatypes.proteomics:MzML"/>        
+    <sniffer type="galaxy.datatypes.proteomics:PepXml"/>
+    <sniffer type="galaxy.datatypes.proteomics:Mgf"/>
+    <sniffer type="galaxy.datatypes.proteomics:ProtXML"/>
+    <sniffer type="galaxy.datatypes.proteomics:MzXML"/>
+    <sniffer type="galaxy.datatypes.proteomics:TraML"/>
+    <sniffer type="galaxy.datatypes.proteomics:MzIdentML"/>
+    <sniffer type="galaxy.datatypes.proteomics:MzQuantML"/>
+    <sniffer type="galaxy.datatypes.proteomics:Xls"/>
+  </sniffers>
+</datatypes>