view display_applications/proteomics/ProtGff.xml @ 7:b82d4034e0f8 draft

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author bgruening
date Tue, 11 Feb 2014 17:51:48 -0500
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<display id="proteomics_gff" version="1.0.0" name="view gff in">
        <dynamic_links from_file="tool-data/proteogenomics_display_site.txt" skip_startswith="#" id="0" name="0">
        <!-- Define parameters by column from file -->
        <dynamic_param name="site_id" value="0"/>
        <dynamic_param name="site_url" value="1"/>
        <!-- We define url and params as normal, but values defined in dynamic_param are available by specified name -->
        <url target_frame="galaxy_main">${site_url}/init_local?file=${encoded_filename.qp}&amp;type=protgff</url>
        <param type="data" name="prot_file" viewable="False" format="protgff"/>
        <param type="data" dataset="prot_file" name="protgff_file" format="protgff" viewable="False" />
        <param type="template" name="encoded_filename" strip="True" >
            #import binascii
            ${binascii.hexlify( $protgff_file.file_name )}
        </param>
        <param type="template" name="galaxy_url" strip="True" >
                ${BASE_URL.split(":")[1][2:]}
        </param>
    </dynamic_links>
</display>