annotate tool-data/mascot_databases.loc.sample @ 3:255b5b6ec617
draft default tip
Better defaults for omssa
| author |
Ira Cooke <iracooke@gmail.com> |
| date |
Mon, 23 Jul 2012 14:48:31 +1000 |
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a929e27eb203 |
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1 #This file lists the names of protein databases installed on Mascot
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2 #
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3 #In order to use interprophet to combine results from different search engines
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4 #it is important that all searches are performed on the same database
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5 #you should therefore ensure that each database installed on mascot has an equivalent
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6 #database installed in the Protk databases directory (databases used by omssa and x!tandem)
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7 #the mascot_to_pepxml tool will ask for this database when performing the conversion.
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8 #
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9 # Entries should follow the be structured as follows
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10 # Display_name dbkey dbNameOnMascot dbkey
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11 #
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12 Swissprot spall_ SPAll spall_
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13 Swissprot Human sphuman_ SPHuman sphuman_ |
