|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
9
|
3 <package name="galaxy_protk" version="1.2.2">
|
|
|
4 <repository toolshed="http://toolshed.g2.bx.psu.edu" name="galaxy_protk" owner="iracooke" changeset_revision="c25df71f7b68" prior_installation_required="True"/>
|
|
|
5 </package>
|
|
8
|
6 <package name="msgfplus" version="20130227">
|
|
0
|
7 <install version="1.0">
|
|
|
8 <actions>
|
|
|
9 <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
|
|
9
|
10 <action type="shell_command">sh install_msgfplus.sh $INSTALL_DIR 1.2.2</action>
|
|
0
|
11 <action type="move_file">
|
|
8
|
12 <source>install_msgfplus.sh</source>
|
|
0
|
13 <destination>$INSTALL_DIR</destination>
|
|
|
14 </action>
|
|
|
15 <action type="set_environment">
|
|
8
|
16 <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
|
|
|
17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
|
|
0
|
18 </action>
|
|
|
19 </actions>
|
|
|
20 </install>
|
|
|
21 <readme>
|
|
8
|
22 Installs MSGF+ via the protk installer
|
|
0
|
23 </readme>
|
|
|
24 </package>
|
|
|
25
|
|
9
|
26 </tool_dependency>
|
