Mercurial > repos > iracooke > protk_msgfplus

comparison tool_dependencies.xml @ 2:0d21fdb9c999

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Uploaded
author iracooke
date Mon, 04 Mar 2013 20:48:04 -0500
parents 6be01b5359b8
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1:528bcbb94199 2:0d21fdb9c999
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="msgfplus" version="20130227"> 3
4 <install version="1.0"> 4 <package name="galaxy_protk" version="1.1.9">
5 <actions> 5 <repository toolshed="http://toolshed.g2.bx.psu.edu" name="galaxy_protk" owner="iracooke" changeset_revision="51f7c347c955"/>
6 <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
7 <action type="shell_command">sh install_msgfplus.sh $INSTALL_DIR 1.1.9</action>
8 <action type="move_file">
9 <source>install_msgfplus.sh</source>
10 <destination>$INSTALL_DIR</destination>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 Installs MSGF+ via the protk installer
20 </readme>
21 </package> 6 </package>
22 7
8 <package name="proteowizard" version="3_0_4388">
9 <repository toolshed="http://toolshed.g2.bx.psu.edu" name="protk_proteowizard" owner="iracooke" changeset_revision="6ead3520e93a"/>
10 </package>
11
12 <package name="msgfplus" version="20130227">
13 <repository toolshed="http://toolshed.g2.bx.psu.edu" name="protk_msgfplus" owner="iracooke" changeset_revision="528bcbb94199"/>
14 </package>
15
16
23 </tool_dependency> 17 </tool_dependency>