Mercurial > repos > iracooke > protk_msgfplus
comparison README @ 1:528bcbb94199
Improved README
| author | iracooke |
|---|---|
| date | Mon, 04 Mar 2013 20:06:45 -0500 |
| parents | 6be01b5359b8 |
| children | 0d21fdb9c999 |
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| 0:6be01b5359b8 | 1:528bcbb94199 |
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| 1 This package is an installer for the MSGF+ search tool. | 1 This package is an installer for the MSGF+ search tool. |
| 2 | 2 |
| 3 MSGF+ is developed at the Centre for Computational Mass Spectrometry at UCSD. | 3 System Requirements. Ensure that you have the following packages installed on your system |
| 4 It is described as follows; | 4 - unzip |
| 5 - java runtime 6 or higher | |
| 5 | 6 |
| 6 Summary | |
| 7 MS-GF+ is a new MS/MS database search tool that is sensitive (it identifies more peptides than other database search tools and as many peptides as spectral library search tools) and universal (works well for diverse types of spectra, different configurations of MS instruments and different experimental protocols). | |
| 8 | |
| 9 MS-GF+ supports the HUPO PSI standard input (mzML) and output (mzIdentML). | |
| 10 | |
| 11 | |
| 12 Full documentation for MSGF+ can be found at these urls | |
| 13 | |
| 14 https://bix-lab.ucsd.edu/pages/viewpage.action?pageId=13533355 | |
| 15 http://proteomics.ucsd.edu/Software/MSGFPlus.html#documentation |