Mercurial > repos > iracooke > protk_msgfplus

diff tool_dependencies.xml @ 7:a8ae51506967

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Updated dependency info
author iracooke
date Mon, 04 Mar 2013 23:59:59 -0500
parents 6be01b5359b8
children 21c7f6a61d61
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Mar 04 21:43:23 2013 -0500
+++ b/tool_dependencies.xml	Mon Mar 04 23:59:59 2013 -0500
@@ -1,22 +1,22 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="msgfplus" version="20130227">
+    <package name="blast" version="2.2.27">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
-                <action type="shell_command">sh install_msgfplus.sh $INSTALL_DIR 1.1.9</action>
+                <action type="shell_command">sh install_blast.sh $INSTALL_DIR 1.2.0</action>
                 <action type="move_file">
-                    <source>install_msgfplus.sh</source>
+                    <source>install_blast.sh</source>
                     <destination>$INSTALL_DIR</destination>
                 </action>
                 <action type="set_environment">
-                    <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PROTK_BLAST_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                 </action>
             </actions>
         </install>
         <readme>
-            Installs MSGF+ via the protk installer
+            Installs BLAST via the protk installer
         </readme>
     </package>