protk_proteogenomics: test-data/augustus

annotate test-data/augustus_sample.gff @ 3:86fd1757f102 draft default tip

planemo upload for repository https://github.com/iracooke/protk-galaxytools/blob/master/protk-proteogenomics/.shed.yml commit 864b3f087fff3a7cb18b2c0dd61442c2495e5b98

author	iracooke
date	Mon, 21 Dec 2015 23:43:55 -0500
parents	28067ed4ea0e
children

rev	line source
0 28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	1 ##gff-version 3
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	2 # This output was generated with AUGUSTUS (version 2.5.5).
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	3 # AUGUSTUS is a gene prediction tool for eukaryotes written by Mario Stanke (mario.stanke@uni-greifswald.de)
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	4 # and Oliver Keller (keller@cs.uni-goettingen.de).
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	5 # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	6 # Using native and syntenically mapped cDNA alignments to improve de novo gene finding
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	7 # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	8 # No extrinsic information on sequences given.
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	9 # Initialising the parameters ...
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	10 # venturia_inaequalis version. Use default transition matrix.
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	11 # Looks like /home/virtualdan/winshare/vp/final_vp_assembly/Pirina.100.fasta is in fasta format.
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	12 # We have hints for 0 sequences and for 0 of the sequences in the input set.
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	13 #
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	14 # ----- prediction on sequence number 1 (length = 532736, name = scaffold14) -----
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	15 #
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	16 # Predicted genes for sequence number 1 on both strands
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	17 # start gene g1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	18 scaffold14 AUGUSTUS gene 2517 3803 . - . ID=g1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	19 scaffold14 AUGUSTUS transcript 2517 3803 0.92 - . ID=g1.t1;Parent=g1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	20 scaffold14 AUGUSTUS stop_codon 2517 2519 . - 0 Parent=g1.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	21 scaffold14 AUGUSTUS CDS 2517 3803 0.92 - 0 ID=g1.t1.cds;Parent=g1.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	22 scaffold14 AUGUSTUS start_codon 3801 3803 . - 0 Parent=g1.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	23 # coding sequence = [atggcagggctagcagcaggcattgttggtgtcgtgtcagctggtaccaaagtcgccatcgtcctttcgcagtatggca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	24 # atgaagtgggagcagctggccaagaagcgcgaatgatcgcgtcggaaatccgaggatcatgcacagttctcacgaccctccactcgacattgaaacat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	25 # gtccagacatcgccgtactacgcgaattgcgctgaactgatcagcgatatgaccgatgcgagtctggagatgtatacggaaatcatggaggtcgtcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	26 # gggattgtcggcaatgacgagcgacagcaagatgaatttgaggaagcggctgctgtggacctttcaaaagccgaagatcgttatgttgagaacggcac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	27 # tggaggcctatagatcgaatttggctcttatgcttggaacgttggatatggctgagaaggcctcgcgaagctacgttgctttgactgaggagattgtg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	28 # caggaagatgaaatggactgcgcaaagcttcaagacctacaactggaacaacaaatgtctctgcttaaggttcaagagttggacccggaaagtatcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	29 # gcttccgcctagcccaacgggcgcagggcggggattttgggggtcgtcaaataaagaatctgcatttccagtcgaggagggttatgtcagtgccctga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	30 # gagaagagattgcgactctcaagaggagccgaactgtctacctgacagaccccgaaaaggtgcgcgatcgagtagctcgacagagcaatcgtttgtcc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	31 # caactcctcgtccaggatcagaggagaatttcgcgaagatggtctcaatccctgccagagagacgtatgagcatgtacagcgacttggcagcagagag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	32 # gtcacggtcgcctacgagtacgcctggcagctcatcagcctccccgagcgaatccagcgatgatctatccagcgattatgcccaggtgaacgaaccca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	33 # tggttagagacttttatgcttggatgtctgcgcaaactggcgttcagcggagcattgtgcttcgacagctgcaagcgcggtttggtgatgggcgaggg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	34 # acaactgtccgcaagcccgtcaacggtgttggaatccatccaggagcaagcgaggacacactatgcgccgatgtctccaagcttgaattggagaagga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	35 # tgcagttgcagcagagacctacgagagacaggctgagccagctcctgtggttggagccagtaaggaaaagaagagctcgttcttgaagaggtcaatgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	36 # ggttgaaaagacgaacgccgtcagcgtcgtga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	37 # protein sequence = [MAGLAAGIVGVVSAGTKVAIVLSQYGNEVGAAGQEARMIASEIRGSCTVLTTLHSTLKHVQTSPYYANCAELISDMTD
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	38 # ASLEMYTEIMEVVEGLSAMTSDSKMNLRKRLLWTFQKPKIVMLRTALEAYRSNLALMLGTLDMAEKASRSYVALTEEIVQEDEMDCAKLQDLQLEQQM
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	39 # SLLKVQELDPESIELPPSPTGAGRGFWGSSNKESAFPVEEGYVSALREEIATLKRSRTVYLTDPEKVRDRVARQSNRLSQLLVQDQRRISRRWSQSLP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	40 # ERRMSMYSDLAAERSRSPTSTPGSSSASPSESSDDLSSDYAQVNEPMVRDFYAWMSAQTGVQRSIVLRQLQARFGDGRGTTVRKPVNGVGIHPGASED
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	41 # TLCADVSKLELEKDAVAAETYERQAEPAPVVGASKEKKSSFLKRSMGLKRRTPSAS]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	42 # end gene g1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	43 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	44 # start gene g2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	45 scaffold14 AUGUSTUS gene 6798 7541 . - . ID=g2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	46 scaffold14 AUGUSTUS transcript 6798 7541 0.56 - . ID=g2.t1;Parent=g2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	47 scaffold14 AUGUSTUS stop_codon 6798 6800 . - 0 Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	48 scaffold14 AUGUSTUS intron 6936 6986 1 - . Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	49 scaffold14 AUGUSTUS intron 7068 7117 1 - . Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	50 scaffold14 AUGUSTUS intron 7275 7401 0.63 - . Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	51 scaffold14 AUGUSTUS CDS 6798 6935 0.97 - 0 ID=g2.t1.cds;Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	52 scaffold14 AUGUSTUS CDS 6987 7067 1 - 0 ID=g2.t1.cds;Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	53 scaffold14 AUGUSTUS CDS 7118 7274 1 - 1 ID=g2.t1.cds;Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	54 scaffold14 AUGUSTUS CDS 7402 7541 0.59 - 0 ID=g2.t1.cds;Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	55 scaffold14 AUGUSTUS start_codon 7539 7541 . - 0 Parent=g2.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	56 # coding sequence = [atgcctaccagattatccaacacccgcaagcaccgcggtcacgtctctgccggtcacggtcgtgtcggcaagcagtatg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	57 # tcacacccctcagcaaccctctcctcgacgttgaacggatcttccaattttcgccattgcaccgcaagcatcccggtggtcgtggtctcgctggtggt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	58 # cagcaccaccacaggaccaacatggataaataccatccaggttacttcggaaaggtcggtatgcgatacttccacaagcaaggcaaccacttctggaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	59 # gccaaccatcaacttggacaagctttggtccctcgttcctctcgagcagcgcgaaaagtacatctccaacaagaagtccgacacagctccagttctcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	60 # acctcctctccttcggttactcaaaggtcctcggaaagggtcgtctcccagaaatcccactcgtcgtccgcgcccgatacttctccgcagaagccgaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	61 # aagaagatcaaggaagctggcggagtcgtccagttggtcggttag]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	62 # protein sequence = [MPTRLSNTRKHRGHVSAGHGRVGKQYVTPLSNPLLDVERIFQFSPLHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKV
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	63 # GMRYFHKQGNHFWKPTINLDKLWSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	64 scaffold14 AUGUSTUS transcript 6798 7541 0.32 - . ID=g2.t2;Parent=g2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	65 scaffold14 AUGUSTUS stop_codon 6798 6800 . - 0 Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	66 scaffold14 AUGUSTUS intron 6936 6986 1 - . Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	67 scaffold14 AUGUSTUS intron 7068 7117 1 - . Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	68 scaffold14 AUGUSTUS intron 7275 7467 0.37 - . Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	69 scaffold14 AUGUSTUS CDS 6798 6935 0.97 - 0 ID=g2.t2.cds;Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	70 scaffold14 AUGUSTUS CDS 6987 7067 1 - 0 ID=g2.t2.cds;Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	71 scaffold14 AUGUSTUS CDS 7118 7274 1 - 1 ID=g2.t2.cds;Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	72 scaffold14 AUGUSTUS CDS 7468 7541 0.33 - 0 ID=g2.t2.cds;Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	73 scaffold14 AUGUSTUS start_codon 7539 7541 . - 0 Parent=g2.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	74 # coding sequence = [atgcctaccagattatccaacacccgcaagcaccgcggtcacgtctctgccggtcacggtcgtgtcggcaagcaccgca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	75 # agcatcccggtggtcgtggtctcgctggtggtcagcaccaccacaggaccaacatggataaataccatccaggttacttcggaaaggtcggtatgcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	76 # tacttccacaagcaaggcaaccacttctggaagccaaccatcaacttggacaagctttggtccctcgttcctctcgagcagcgcgaaaagtacatctc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	77 # caacaagaagtccgacacagctccagttctcgacctcctctccttcggttactcaaaggtcctcggaaagggtcgtctcccagaaatcccactcgtcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	78 # tccgcgcccgatacttctccgcagaagccgaaaagaagatcaaggaagctggcggagtcgtccagttggtcggttag]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	79 # protein sequence = [MPTRLSNTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGNHFWKPTINLDKL
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	80 # WSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	81 # end gene g2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	82 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	83 # start gene g3
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	84 scaffold14 AUGUSTUS gene 8211 8576 0.98 + . ID=g3
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	85 scaffold14 AUGUSTUS transcript 8211 8576 0.98 + . ID=g3.t1;Parent=g3
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	86 scaffold14 AUGUSTUS start_codon 8211 8213 . + 0 Parent=g3.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	87 scaffold14 AUGUSTUS CDS 8211 8576 0.98 + 0 ID=g3.t1.cds;Parent=g3.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	88 scaffold14 AUGUSTUS stop_codon 8574 8576 . + 0 Parent=g3.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	89 # coding sequence = [atgtcaaaacaactctccacaaaggaagtttccacacacaaatcagtcgaagagggtctctggatcataatcgacaacg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	90 # aagtctacgacgtcacaaaattcatcgaagaacaccccggcggtccaaagatcctaaagcgcgtcggtgggaaagatgccagcaagcaattctggaag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	91 # gcaagcaatcccatccccttacaaccatctcaccaaaaacatccactctcacaccctctaccatcatctgttcttataggtgcacgtgtgctaacctt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	92 # atccgcgtcacagtaccacagcgacaacgtcctaaaaaaatacaaacctaaactcatgatcggaagcgtcaaagaagacgccaagttatag]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	93 # protein sequence = [MSKQLSTKEVSTHKSVEEGLWIIIDNEVYDVTKFIEEHPGGPKILKRVGGKDASKQFWKASNPIPLQPSHQKHPLSHP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	94 # LPSSVLIGARVLTLSASQYHSDNVLKKYKPKLMIGSVKEDAKL]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	95 # end gene g3
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	96 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	97 # start gene g4
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	98 scaffold14 AUGUSTUS gene 9661 12081 . - . ID=g4
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	99 scaffold14 AUGUSTUS transcript 9661 12081 0.96 - . ID=g4.t1;Parent=g4
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	100 scaffold14 AUGUSTUS stop_codon 9661 9663 . - 0 Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	101 scaffold14 AUGUSTUS intron 10248 10299 0.97 - . Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	102 scaffold14 AUGUSTUS intron 10533 10666 0.99 - . Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	103 scaffold14 AUGUSTUS CDS 9661 10247 0.97 - 2 ID=g4.t1.cds;Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	104 scaffold14 AUGUSTUS CDS 10300 10532 0.98 - 1 ID=g4.t1.cds;Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	105 scaffold14 AUGUSTUS CDS 10667 12081 0.98 - 0 ID=g4.t1.cds;Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	106 scaffold14 AUGUSTUS start_codon 12079 12081 . - 0 Parent=g4.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	107 # coding sequence = [atggagacctatcaaggcaaggtccagacgccgcaggacgccatcatccttttcgaagcatgtcgactaggcctcacac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	108 # cgcgtgtgcagaggagactatcggagaaggagaggcaacagatcaaatctggctcggtattcgtgtgggatgaacgcgaagctggcatgaggaggtgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	109 # actgacgggaaatcatggagcgcaagtcgcgtatctggtagctttctcacctatcgcgaaatggaaggaaagagaggagggactggcctgcctgcagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	110 # cgctacaccacctgctctcaggaagtcaagcagtggaacgagaagctccgccaactcgaacaatggcggttcagaggacgacgaggaaggaccagacg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	111 # ggtacaagtacaaggccgacggactcatgaaacagtctttcagtatcaccacctcagacggccgacatcttcacctcatcagctacttcgcaagaaat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	112 # cctgcacatccattaaaacaaccatccacggatccgcaactgcgcaatattgttccgcaaaaaggcatgtaccccgaggctacagtcaatgaagccac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	113 # gaacataccccctgtcactcgaggacctatgggggggacatcgccgcatcctcctgcgcatccgcctccacagatgtacgtcgcagcctatccatttc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	114 # caccgcctccaggataccaagcaggaccaatgcatcatcactaccctccacaaggctggccgccaagcccgggacatctaggccctggaggagtacca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	115 # cctggagcattttattatcctgctcctcctccgggatatgtttatccgaattcaccatacgcgccatccccatatccgtatggccaccctcctccgca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	116 # cgcgcaggagagaggtccacctccgccgcctcaatcaagtctgccccctctgagtggcccgatacatccctctgctgggcaatgggcccctccagctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	117 # cgcgtacatcctcggccacgtatgcgcaaagcaggcctcctacatccttgcaagagagctacagccgctcggcagcagaacagagacaagaagagaca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	118 # tcgcgcgctcctggtccgcagctagcacccgtagttgccttccagaacaaacctccgactccaccagagagcaggaatggcgcgacaccgcctgcgaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	119 # gagctacccaaccgaccctctaccaacccgcgaaactaatactactactggacctacaaagacctttcccagtatcaaagcattgattaacggcgatg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	120 # tgataacatcgagacgagaagaggaccggacacgcactcgatctcgcagtcgaagcccgctaggaagcagaatccgcgatgttcccagtgcgatggca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	121 # gccggaggccgagagagagaccgtagcgatttgaagaggttggatgcccaacttctcaaatcttctggtctcgagtcttcagatggcaacgggaagct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	122 # tgcacaaaaccaccctggtgcacacagcaagccaatttcgagaagtatcgatgttattgcaaaagtcatccccggtcatgttcttgccacgatgcctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	123 # aaaatatcgaacttgaacctcaagacttcggaagatggccactacaatcgggtaacggacggtatacggagatacagccaaccccaacaagttccgaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	124 # gatgggcaaaagctgcaacttcagacgatgcccgacgataacttcgggcgggttatggaacctagcctgaaggaagttcttgatggcatgactggaag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	125 # acagcgaggtctgggccagctcgggcaaatgcgtcttactactcaagatgtcaatagcaaacgatttgatctgtaccaagctctcaaatacgctacac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	126 # catcatccaccatcactcggattttgaatgaattgaagactggtgtcctgccctcagaaaagttgctgcgagaaacgaatatcggcgtggaagttgac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	127 # gggctgcgctggttgacaaaaatcccagttatcgcaaagctcagcaccgagatcgtcaatgaatggcgcactgttatagagtctggtcctcgtcctca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	128 # tccctcaaacgatgagatctttgggccttactggcggcttagcaacaatttttacgtttctaatcatggcagcgagagcccgtttcccagactatcac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	129 # ttggaaacgagaagcttggtcttggttccctgaacgacaacaagaatctcggaacagaaaatggaatgatacccaagaccaaggaggataggttataa]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	130 # protein sequence = [METYQGKVQTPQDAIILFEACRLGLTPRVQRRLSEKERQQIKSGSVFVWDEREAGMRRWTDGKSWSASRVSGSFLTYR
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	131 # EMEGKRGGTGLPAGATPPALRKSSSGTRSSANSNNGGSEDDEEGPDGYKYKADGLMKQSFSITTSDGRHLHLISYFARNPAHPLKQPSTDPQLRNIVP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	132 # QKGMYPEATVNEATNIPPVTRGPMGGTSPHPPAHPPPQMYVAAYPFPPPPGYQAGPMHHHYPPQGWPPSPGHLGPGGVPPGAFYYPAPPPGYVYPNSP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	133 # YAPSPYPYGHPPPHAQERGPPPPPQSSLPPLSGPIHPSAGQWAPPAARTSSATYAQSRPPTSLQESYSRSAAEQRQEETSRAPGPQLAPVVAFQNKPP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	134 # TPPESRNGATPPAKSYPTDPLPTRETNTTTGPTKTFPSIKALINGDVITSRREEDRTRTRSRSRSPLGSRIRDVPSAMAAGGRERDRSDLKRLDAQLL
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	135 # KSSGLESSDGNGKLAQNHPGAHSKPISRSIDVIAKVIPGHVLATMPENIELEPQDFGRWPLQSGNGRYTEIQPTPTSSEDGQKLQLQTMPDDNFGRVM
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	136 # EPSLKEVLDGMTGRQRGLGQLGQMRLTTQDVNSKRFDLYQALKYATPSSTITRILNELKTGVLPSEKLLRETNIGVEVDGLRWLTKIPVIAKLSTEIV
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	137 # NEWRTVIESGPRPHPSNDEIFGPYWRLSNNFYVSNHGSESPFPRLSLGNEKLGLGSLNDNKNLGTENGMIPKTKEDRL]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	138 # end gene g4
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	139 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	140 # start gene g5
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	141 scaffold14 AUGUSTUS gene 11112 11486 0.43 + . ID=g5
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	142 scaffold14 AUGUSTUS transcript 11112 11486 0.43 + . ID=g5.t1;Parent=g5
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	143 scaffold14 AUGUSTUS start_codon 11112 11114 . + 0 Parent=g5.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	144 scaffold14 AUGUSTUS CDS 11112 11486 0.43 + 0 ID=g5.t1.cds;Parent=g5.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	145 scaffold14 AUGUSTUS stop_codon 11484 11486 . + 0 Parent=g5.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	146 # coding sequence = [atgtacgcgcagctggaggggcccattgcccagcagagggatgtatcgggccactcagagggggcagacttgattgagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	147 # cggcggaggtggacctctctcctgcgcgtgcggaggagggtggccatacggatatggggatggcgcgtatggtgaattcggataaacatatcccggag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	148 # gaggagcaggataataaaatgctccaggtggtactcctccagggcctagatgtcccgggcttggcggccagccttgtggagggtagtgatgatgcatt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	149 # ggtcctgcttggtatcctggaggcggtggaaatggataggctgcgacgtacatctgtggaggcggatgcgcaggaggatgcggcgatgtcccccccat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	150 # ag]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	151 # protein sequence = [MYAQLEGPIAQQRDVSGHSEGADLIEAAEVDLSPARAEEGGHTDMGMARMVNSDKHIPEEEQDNKMLQVVLLQGLDVP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	152 # GLAASLVEGSDDALVLLGILEAVEMDRLRRTSVEADAQEDAAMSPP]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	153 # end gene g5
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	154 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	155 # start gene g6
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	156 scaffold14 AUGUSTUS gene 22383 25038 0.97 + . ID=g6
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	157 scaffold14 AUGUSTUS transcript 22383 25038 0.97 + . ID=g6.t1;Parent=g6
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	158 scaffold14 AUGUSTUS start_codon 22383 22385 . + 0 Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	159 scaffold14 AUGUSTUS intron 22637 22690 1 + . Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	160 scaffold14 AUGUSTUS intron 22778 22830 1 + . Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	161 scaffold14 AUGUSTUS intron 24145 24194 1 + . Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	162 scaffold14 AUGUSTUS CDS 22383 22636 0.97 + 0 ID=g6.t1.cds;Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	163 scaffold14 AUGUSTUS CDS 22691 22777 1 + 1 ID=g6.t1.cds;Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	164 scaffold14 AUGUSTUS CDS 22831 24144 1 + 1 ID=g6.t1.cds;Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	165 scaffold14 AUGUSTUS CDS 24195 25038 1 + 1 ID=g6.t1.cds;Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	166 scaffold14 AUGUSTUS stop_codon 25036 25038 . + 0 Parent=g6.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	167 # coding sequence = [atgttgatcaggtcaaatccctccttgcattaccccattacaatcacgaagctcctggcgaaaccggatcagtccgtcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	168 # acaggttcgctccgcttttctcctacacttataagactaccgtcactgaaggcaataagtatggcgatgagccaattcagttccagaaggacttcccc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	169 # gccgagtttcagtccgagcttgagggtaccctacgcgtttggaagataaagcccggcgatgttctgtacgaatctggaattcaactagtcgacattga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	170 # cgagccatgcactcacgatactgtttttggtggcctatgtgcgaattgtggccaagaaatggacaaactagataactatctaaccaccgagagagcct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	171 # cccaacgcgccaccgtttttgcctcccacggaaacacagctctcctagtcagcaagaaggaagcaggtcggatcaatgaagaggctaaaagacgtctc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	172 # ttacagggtcgcaagctttcactagttgtggatctggatcaaaccatcattcacgccactgtcgatccaactgtggctgaatggcagcaggaccccgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	173 # caacccaaactacgaggccgtaaagggggtgagacaattccagctggtagatgatggacctggaggtcgtggttgtaattactacatcaaattgcgac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	174 # ccggtctggaagagtttctggaagatatcgcgaagaagtacgaacttcacatctacaccatgggaaccagggcatacgcgcaaaagatcgctgagatt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	175 # gttgacccacaaaggagattttttggtgacaggatactcagcagagacgaaagtggaagcttgacgaacaagactttgcagcgcatatttcccgtcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	176 # cacagacatggttgtcattattgacgatcgtggagatgtttggcaatggagtcccaacttaatcaaagtcactccctacgacttcttcgtcggaattg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	177 # gtgacatcaattctagctttttgccgaagaagaccgacagcatttccaaaaggactaggacacccccacccccaccgcctccagccgaaataccagag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	178 # gacaaggagactaatgatagctttgaagaagcggagtcccccaccaacggtctagcaattgacacgaccgttatactggaagactccgatgcgccgac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	179 # cttggagacacagcttgtagctatggcaggaggagacgacccctccatcatagaagagaaaagtaatacacaggcggagacattagcggcgcaagtca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	180 # cagatcgccctttgatgaagaagcaggaaatgctagacaagcttgatgaagaggaggaagccaaagaaaacagtgaagaggagcgacctgtggaaacc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	181 # acacccgataccaaacaacgccacaatcttctacacgatgatgatgacgaattgcgacatcttcaggccaatctggagagcatccaccgactgtttta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	182 # tgaagaatacgaccagaatatcatagcaagtccgccgaggctttctcagcttcggggcgagagatcagcgaaaaagactccggtcgacaaccttgagc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	183 # tcgtgccggacgtcaaagatatcatgccacggatgaaattggatgttttgaaacatgtggtcatatgcttcacgggggtcattcctcaaggcttaaac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	184 # catgaaacatctgacattggcatgtgggcacgatcttttggagccagggtgtcaccaaatttgacaaagtcgaccacgcatgttgttgcccacaaaga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	185 # tcgacgaacaagtaaagttcgacaggcggcaaggcatccgaacatcaaaatcgtcgcaaccagctggctactcgaatgctttgtgcagtgggttgcgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	186 # ctcctgagggaccgcatacgatcaaagtggagagcgacgagcatgatgctcatgactcgctgccattcgaggagctagaagaggcttcgatgttaact
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	187 # ccatcagaagacggaggcgcggacgatgctgtcttgccttcggaagtggaggaagcggacgaagaacccaattccccagtcttggacatactagaaaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	188 # cgtcgaatggggtgatctagaagatgaaatgaaagacttctacgactcggaggacgaaactgaagctgaagataccgatgaaggccatgacgaaggca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	189 # tggagtcagatgcaagcgggaaaagtggacgcagctcacgaagcacctcgtcacgaaaagctaaacgcaagcgaaggacggaatcggttaacggcgac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	190 # tatgaagaagcgggcgaaagcacatcggcgttgcagaagcgacggaaaatggcggcagagcgtactacaggacttgccaacgtggagacgttggagaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	191 # tccaagtgggctacccagccccgacacgacaggaccagaggaggaagcaggagagaaggacaaaggcttatcgaatggcgcagaaggcgatgtgagcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	192 # atgacattgatgaattcgagaaagacatgatggcaatgttcgacaaggacagtgatgccgaggattag]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	193 # protein sequence = [MLIRSNPSLHYPITITKLLAKPDQSVDRFAPLFSYTYKTTVTEGNKYGDEPIQFQKDFPAEFQSELEGTLRVWKIKPG
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	194 # DVLYESGIQLVDIDEPCTHDTVFGGLCANCGQEMDKLDNYLTTERASQRATVFASHGNTALLVSKKEAGRINEEAKRRLLQGRKLSLVVDLDQTIIHA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	195 # TVDPTVAEWQQDPANPNYEAVKGVRQFQLVDDGPGGRGCNYYIKLRPGLEEFLEDIAKKYELHIYTMGTRAYAQKIAEIVDPQRRFFGDRILSRDESG
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	196 # SLTNKTLQRIFPVDTDMVVIIDDRGDVWQWSPNLIKVTPYDFFVGIGDINSSFLPKKTDSISKRTRTPPPPPPPAEIPEDKETNDSFEEAESPTNGLA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	197 # IDTTVILEDSDAPTLETQLVAMAGGDDPSIIEEKSNTQAETLAAQVTDRPLMKKQEMLDKLDEEEEAKENSEEERPVETTPDTKQRHNLLHDDDDELR
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	198 # HLQANLESIHRLFYEEYDQNIIASPPRLSQLRGERSAKKTPVDNLELVPDVKDIMPRMKLDVLKHVVICFTGVIPQGLNHETSDIGMWARSFGARVSP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	199 # NLTKSTTHVVAHKDRRTSKVRQAARHPNIKIVATSWLLECFVQWVAAPEGPHTIKVESDEHDAHDSLPFEELEEASMLTPSEDGGADDAVLPSEVEEA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	200 # DEEPNSPVLDILENVEWGDLEDEMKDFYDSEDETEAEDTDEGHDEGMESDASGKSGRSSRSTSSRKAKRKRRTESVNGDYEEAGESTSALQKRRKMAA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	201 # ERTTGLANVETLENPSGLPSPDTTGPEEEAGEKDKGLSNGAEGDVSDDIDEFEKDMMAMFDKDSDAED]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	202 # end gene g6
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	203 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	204 # start gene g7
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	205 scaffold14 AUGUSTUS gene 25584 27469 0.98 + . ID=g7
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	206 scaffold14 AUGUSTUS transcript 25584 27469 0.98 + . ID=g7.t1;Parent=g7
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	207 scaffold14 AUGUSTUS start_codon 25584 25586 . + 0 Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	208 scaffold14 AUGUSTUS intron 25737 25813 0.99 + . Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	209 scaffold14 AUGUSTUS intron 26987 27043 1 + . Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	210 scaffold14 AUGUSTUS CDS 25584 25736 0.98 + 0 ID=g7.t1.cds;Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	211 scaffold14 AUGUSTUS CDS 25814 26986 1 + 0 ID=g7.t1.cds;Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	212 scaffold14 AUGUSTUS CDS 27044 27469 1 + 0 ID=g7.t1.cds;Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	213 scaffold14 AUGUSTUS stop_codon 27467 27469 . + 0 Parent=g7.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	214 # coding sequence = [atgaccacagacaaccccgaggctaagatggtggaagtggctcagccaacgaagatggccgtcgtgccagtcgagaagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	215 # aggttccgaaacgtccttccaagttgcgcttcatggacctctcggtcgacatcaagacattgattgtcagccatgtccatcggccaaccgaactcaag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	216 # aatctctgcctcacctgctcgcagatgcacaagattaccgtccggaaactgtatcacgaagtcacgctagaggtcggttcgtctaccgatgccaaact
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	217 # cacctccttcatcaatccccgcaatatcggcctccctcacattcggaagctcgacctatacctggctgaggttgccgacaagtgcaaccagctacaac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	218 # aggctcactttgccatacggatgatactagagttccttccagaaaacatactcgagaaattctcatggcatccttggtcgcctttcctggccgacaat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	219 # ttggttctactgtacaagaagcagcgacggatggagtggttagaaggcatagctctggataggaatgttctacccgagttggaaaagcaatccgactt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	220 # tgaccagatattcacaaggacgcggcggctaggactatatccggattcgcgagatgtgctcaatttctgcgccaatctgatcaagcggacaaaaaagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	221 # tcgagaagattacgctgcatgctagtttcgatgaggactcagatcggactccaattcctagccgggagctgaatgactccagcacagatcttggtttg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	222 # ataactaggaccatgttcggccatatggagccattcgagaaatgcacacctctgtcgttgaaggatcttacactgcaaaagatcaatctccgttatgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	223 # cgccaattcgtattgcaaattcattgatttccgcgtcatgaaggcgctccgtatatttgggtgtccgggtgccgactccctctttgccgagctatcaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	224 # aatcgcataagttaccagagcgcttggagactctcgaattcaagcacgatgataaccaagaaaacgacgcattgaatgctttggacggcttcttgaaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	225 # ctggtttctggcatcaaagtgctcaccatggatatctgctatgcaaagcaattaccgagcgcagatggaatcattcggcattctcgaacgttgaggga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	226 # attgaatgtgcacggctctcgtggagacggagaggaagaggaacttatcattgactttgacgatttcgagaagatatgcaagtcttgctcgtcaattg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	227 # aacagctgtcaatggcgttcccgacgaccagtctgatccgaccgatttcagactcatttcaagcattcgagaacgcgttgggagatctcgcgaacctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	228 # attactctcaacataacgacctggcctacgaacacaccgtctacctcccgcctcccacgtaaaacctacgaaatcctcctccaatccctcgcaaactc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	229 # gggtttcgaacactcgatccaccacgcatcctcgcgcacccctcctcggtcctcgaaactcgccgtcatcgctttcggttcctctgatcgcgtatacg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	230 # atcgcgaagactccaagaaccagattatatttgtgaagggtaggcagactgatcctttcggaggggaaaagccattggcggtgcaggtcggttggtgt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	231 # ctaaggaagtttgtggagccgaggagtgatgtgcttgatttctcgttggcgaggagttgtagaccgcctactagggaaccgccggcgagtgaggatag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	232 # tgagtaa]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	233 # protein sequence = [MTTDNPEAKMVEVAQPTKMAVVPVEKEVPKRPSKLRFMDLSVDIKTLIVSHVHRPTELKNLCLTCSQMHKITVRKLYH
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	234 # EVTLEVGSSTDAKLTSFINPRNIGLPHIRKLDLYLAEVADKCNQLQQAHFAIRMILEFLPENILEKFSWHPWSPFLADNLVLLYKKQRRMEWLEGIAL
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	235 # DRNVLPELEKQSDFDQIFTRTRRLGLYPDSRDVLNFCANLIKRTKKVEKITLHASFDEDSDRTPIPSRELNDSSTDLGLITRTMFGHMEPFEKCTPLS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	236 # LKDLTLQKINLRYAANSYCKFIDFRVMKALRIFGCPGADSLFAELSKSHKLPERLETLEFKHDDNQENDALNALDGFLKLVSGIKVLTMDICYAKQLP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	237 # SADGIIRHSRTLRELNVHGSRGDGEEEELIIDFDDFEKICKSCSSIEQLSMAFPTTSLIRPISDSFQAFENALGDLANLITLNITTWPTNTPSTSRLP
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	238 # RKTYEILLQSLANSGFEHSIHHASSRTPPRSSKLAVIAFGSSDRVYDREDSKNQIIFVKGRQTDPFGGEKPLAVQVGWCLRKFVEPRSDVLDFSLARS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	239 # CRPPTREPPASEDSE]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	240 # end gene g7
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	241 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	242 # start gene g8
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	243 scaffold14 AUGUSTUS gene 29180 30106 . - . ID=g8
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	244 scaffold14 AUGUSTUS transcript 29180 30106 0.76 - . ID=g8.t1;Parent=g8
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	245 scaffold14 AUGUSTUS stop_codon 29180 29182 . - 0 Parent=g8.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	246 scaffold14 AUGUSTUS CDS 29180 30106 0.76 - 0 ID=g8.t1.cds;Parent=g8.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	247 scaffold14 AUGUSTUS start_codon 30104 30106 . - 0 Parent=g8.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	248 # coding sequence = [atgttccgagctcgcgacagtctgcgcaagctacgtagccagggtcttccatcaaccaaaatttggctccctactccta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	249 # gaagccagagacttctagcatccttcgccaaatctcgcaataccttcccatggcattacgctgtccctgcagccatgggcgcggctgtgttctcgttt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	250 # gtctttatcgcccaaagtcagaaaggttcactgccgtatccaggaggttgctgttctcgggatcggaagcctctactcgtatcatattacacagataa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	251 # accctgcactcttagggatgtgacagatattgcaggtctcatggctgcgatgtgggtatccgagcgcataaacgaacaatcatcatcgaaggatgcac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	252 # tcactgtcaaggacgaccttcttttcgatattgctagtcgcttggctttgctcagaaatggcggagtcgagggaagttctctaggaaagacagaatgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	253 # cttcaaatgtttgccgagtcggaatcgaatcgcttgaaagactcaccgtttggtcgagagagttgcgatctcagcctgatgagtggggacgccaaaac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	254 # tgcctgggttgctgacagcattgggtacttcatcttttctgaccgcatggatgagccacatccgttatcaaagctggacgactggatagaccacttaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	255 # tcgatcggggttcctttgtggaatcgaagttcatgactgtcttgaatgatgtagagagagtaatcatgattgagatgtacaaggaggctcgaaaggca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	256 # tatcaaaatgcagaaactcgcaaggaaatggaagctatgggacttccagttgcgtctgctcaagatatgatgctgatagatgcgatgatgcatgttta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	257 # tcggcgactcagcggagatagggttctcaaggacgtgggacacgaagatgatgttggtcattga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	258 # protein sequence = [MFRARDSLRKLRSQGLPSTKIWLPTPRSQRLLASFAKSRNTFPWHYAVPAAMGAAVFSFVFIAQSQKGSLPYPGGCCS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	259 # RDRKPLLVSYYTDKPCTLRDVTDIAGLMAAMWVSERINEQSSSKDALTVKDDLLFDIASRLALLRNGGVEGSSLGKTECLQMFAESESNRLKDSPFGR
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	260 # ESCDLSLMSGDAKTAWVADSIGYFIFSDRMDEPHPLSKLDDWIDHLIDRGSFVESKFMTVLNDVERVIMIEMYKEARKAYQNAETRKEMEAMGLPVAS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	261 # AQDMMLIDAMMHVYRRLSGDRVLKDVGHEDDVGH]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	262 # end gene g8
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	263 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	264 # start gene g9
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	265 scaffold14 AUGUSTUS gene 30672 31824 1 + . ID=g9
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	266 scaffold14 AUGUSTUS transcript 30672 31824 1 + . ID=g9.t1;Parent=g9
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	267 scaffold14 AUGUSTUS start_codon 30672 30674 . + 0 Parent=g9.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	268 scaffold14 AUGUSTUS intron 31248 31299 1 + . Parent=g9.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	269 scaffold14 AUGUSTUS CDS 30672 31247 1 + 0 ID=g9.t1.cds;Parent=g9.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	270 scaffold14 AUGUSTUS CDS 31300 31824 1 + 0 ID=g9.t1.cds;Parent=g9.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	271 scaffold14 AUGUSTUS stop_codon 31822 31824 . + 0 Parent=g9.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	272 # coding sequence = [atgccaatcgaaaacatccaaaacccatccgcaaaacactggaactgcacaaacaccctcaacccctccatcctcccct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	273 # tccaccaatctctccccgactacgccataaccccgctcacccccctagaagctctagcagaagacctaggtataggccacatctacgtcaaagacgaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	274 # ggcacgcgtttcggtctgcccgccttcaaaatcctaggcgcctcatgggcggtttaccgagccatcgcggctcaattgggtaaaccgacgacaacatc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	275 # actggatgatttatgcaatgctgccgaggggaggggaattcgaatcgtcacgacatcagagggaaactggggtcgagcggttgctcgaatggggaggt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	276 # atcttggggttgcggttacggtttatgtccctcggtatatggatgaagcgacacgggggaagatttcaagggaaggcgctgaggttatcctacataaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	277 # ggcgaatacgacgattgtctatttacttgtcgacacgtctccgaggaaacgggggctcttcttgttttggatacgagttttgatgggtacacggagat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	278 # accgcagtgggtgacggatgggtactcttctatgcttgaagaagtggattcgcaactccgggctgcgattgacagaccggcgacccatgcgattgctt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	279 # ctgttggtgtggggtcgtgggctcatgccgtggtggctcattataaatccaaagatccgactgcagctgttgcgactgttgagcctaagacggcgaat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	280 # tgtcttgctacctctctcgacgccggcaagattatttcagtcaagactgacgtcaccattatgaacggcatgaattgcggaactgtgtctgacattgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	281 # atggccgtatctgagagatggtgtcgatgcaagtgttaccgtcagtgagatgcaggcacacgaagccgttctgtatctgagagcgcatggcgtgaatg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	282 # ctggaccttgtggagcggcaccactcgccgcattgagggagttgaagaagttgaactggcttgggcttgggtcggatagcgtcgtggtactttattgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	283 # acagaggccgcaagagcgtataaggagcctaccagcgagtaa]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	284 # protein sequence = [MPIENIQNPSAKHWNCTNTLNPSILPFHQSLPDYAITPLTPLEALAEDLGIGHIYVKDEGTRFGLPAFKILGASWAVY
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	285 # RAIAAQLGKPTTTSLDDLCNAAEGRGIRIVTTSEGNWGRAVARMGRYLGVAVTVYVPRYMDEATRGKISREGAEVILHKGEYDDCLFTCRHVSEETGA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	286 # LLVLDTSFDGYTEIPQWVTDGYSSMLEEVDSQLRAAIDRPATHAIASVGVGSWAHAVVAHYKSKDPTAAVATVEPKTANCLATSLDAGKIISVKTDVT
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	287 # IMNGMNCGTVSDIAWPYLRDGVDASVTVSEMQAHEAVLYLRAHGVNAGPCGAAPLAALRELKKLNWLGLGSDSVVVLYCTEAARAYKEPTSE]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	288 # end gene g9
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	289 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	290 # start gene g10
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	291 scaffold14 AUGUSTUS gene 31923 33129 . - . ID=g10
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	292 scaffold14 AUGUSTUS transcript 31923 33129 0.76 - . ID=g10.t1;Parent=g10
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	293 scaffold14 AUGUSTUS stop_codon 31923 31925 . - 0 Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	294 scaffold14 AUGUSTUS intron 32358 32419 1 - . Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	295 scaffold14 AUGUSTUS intron 32848 32915 0.99 - . Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	296 scaffold14 AUGUSTUS CDS 31923 32357 1 - 0 ID=g10.t1.cds;Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	297 scaffold14 AUGUSTUS CDS 32420 32847 0.94 - 2 ID=g10.t1.cds;Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	298 scaffold14 AUGUSTUS CDS 32916 33129 0.82 - 0 ID=g10.t1.cds;Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	299 scaffold14 AUGUSTUS start_codon 33127 33129 . - 0 Parent=g10.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	300 # coding sequence = [atgtctcaccatgagtcgtacgactcgcacaagatgccaaatatgcatgtgcaacagggtcccgatatggccatgaccg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	301 # atgctttgcgtaaacaccttacgcgccacattctatcaccgggacctgtcacgcagcgacggttggattttgagcatgcacgaccgacgtggctgagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	302 # gagatgtttgcagaagccactggtgtctttttctacgtatatcccgggatcgcagcaacagcagctttcatcttgcaaaaagagagccctgctttggg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	303 # atccgttttcacgatagggctggcttatggtataggcgtttcccttgggattatttgttgcgcaggtacatcggggggacatttcaatccatccatca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	304 # ccatctgcttcgccatttggcaaggatttccgtggagaaaggtgccctactacattttcgcgcagatagctggcgccttcttcgccggcttgattctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	305 # tacgggcagtaccatcagcaaatcgaggtttatagattgggactggagaagttggggatgcctgaggtttttatggggagtccggccagtatttttac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	306 # gtcatatccgctggggagtcagacgaatcaggcatggttggttttgattgagttttttgttgatgcgtttcttggcttcgccatctgggccgtcctcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	307 # atccatctaatcccttcatctcagctggcatcgcaccattcgtcatcggtctcgcctacagtctcatgatatggggttttgcaagcgtaaccatcagt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	308 # accaatcttgcccgagatctaggcgggcgccttgtagccatgttgttttacggttccgatgccttcacgtacatgtcatattggtggattggcatctt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	309 # catcaatatacctgccacgatttttgcgacgtgcttttacgagttggtgtttcgggatagtttggataagattgcgcttggacatgcgcagcatgagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	310 # atggagtggatgggattgcgagacatttgagtcagacggggttgatggatccgtatccagaggagagctcgttgaggaggaaggagtatgcgagtcag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	311 # tcttcgaggatatcttga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	312 # protein sequence = [MSHHESYDSHKMPNMHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	313 # TAAFILQKESPALGSVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLG
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	314 # MPEVFMGSPASIFTSYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	315 # DAFTYMSYWWIGIFINIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	316 scaffold14 AUGUSTUS transcript 31923 33087 0.11 - . ID=g10.t2;Parent=g10
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	317 scaffold14 AUGUSTUS stop_codon 31923 31925 . - 0 Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	318 scaffold14 AUGUSTUS intron 32358 32419 1 - . Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	319 scaffold14 AUGUSTUS intron 32848 32915 0.99 - . Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	320 scaffold14 AUGUSTUS CDS 31923 32357 1 - 0 ID=g10.t2.cds;Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	321 scaffold14 AUGUSTUS CDS 32420 32847 0.94 - 2 ID=g10.t2.cds;Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	322 scaffold14 AUGUSTUS CDS 32916 33087 0.11 - 0 ID=g10.t2.cds;Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	323 scaffold14 AUGUSTUS start_codon 33085 33087 . - 0 Parent=g10.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	324 # coding sequence = [atgcatgtgcaacagggtcccgatatggccatgaccgatgctttgcgtaaacaccttacgcgccacattctatcaccgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	325 # gacctgtcacgcagcgacggttggattttgagcatgcacgaccgacgtggctgagggagatgtttgcagaagccactggtgtctttttctacgtatat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	326 # cccgggatcgcagcaacagcagctttcatcttgcaaaaagagagccctgctttgggatccgttttcacgatagggctggcttatggtataggcgtttc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	327 # ccttgggattatttgttgcgcaggtacatcggggggacatttcaatccatccatcaccatctgcttcgccatttggcaaggatttccgtggagaaagg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	328 # tgccctactacattttcgcgcagatagctggcgccttcttcgccggcttgattctgtacgggcagtaccatcagcaaatcgaggtttatagattggga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	329 # ctggagaagttggggatgcctgaggtttttatggggagtccggccagtatttttacgtcatatccgctggggagtcagacgaatcaggcatggttggt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	330 # tttgattgagttttttgttgatgcgtttcttggcttcgccatctgggccgtcctcgatccatctaatcccttcatctcagctggcatcgcaccattcg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	331 # tcatcggtctcgcctacagtctcatgatatggggttttgcaagcgtaaccatcagtaccaatcttgcccgagatctaggcgggcgccttgtagccatg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	332 # ttgttttacggttccgatgccttcacgtacatgtcatattggtggattggcatcttcatcaatatacctgccacgatttttgcgacgtgcttttacga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	333 # gttggtgtttcgggatagtttggataagattgcgcttggacatgcgcagcatgaggatggagtggatgggattgcgagacatttgagtcagacggggt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	334 # tgatggatccgtatccagaggagagctcgttgaggaggaaggagtatgcgagtcagtcttcgaggatatcttga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	335 # protein sequence = [MHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAATAAFILQKESPALG
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	336 # SVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLGMPEVFMGSPASIFT
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	337 # SYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGSDAFTYMSYWWIGIF
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	338 # INIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	339 # end gene g10
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	340 ###
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	341 # start gene g11
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	342 scaffold14 AUGUSTUS gene 34994 38214 . - . ID=g11
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	343 scaffold14 AUGUSTUS transcript 34994 38214 0.35 - . ID=g11.t1;Parent=g11
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	344 scaffold14 AUGUSTUS stop_codon 34994 34996 . - 0 Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	345 scaffold14 AUGUSTUS intron 35009 35061 1 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	346 scaffold14 AUGUSTUS intron 35522 35657 0.87 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	347 scaffold14 AUGUSTUS intron 35799 35851 1 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	348 scaffold14 AUGUSTUS intron 36061 36125 1 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	349 scaffold14 AUGUSTUS intron 36290 36340 1 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	350 scaffold14 AUGUSTUS intron 36978 37202 0.99 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	351 scaffold14 AUGUSTUS intron 37920 37965 0.89 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	352 scaffold14 AUGUSTUS intron 38139 38192 0.47 - . Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	353 scaffold14 AUGUSTUS CDS 34994 35008 1 - 0 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	354 scaffold14 AUGUSTUS CDS 35062 35521 1 - 1 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	355 scaffold14 AUGUSTUS CDS 35658 35798 0.87 - 1 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	356 scaffold14 AUGUSTUS CDS 35852 36060 1 - 0 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	357 scaffold14 AUGUSTUS CDS 36126 36289 1 - 2 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	358 scaffold14 AUGUSTUS CDS 36341 36977 0.88 - 0 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	359 scaffold14 AUGUSTUS CDS 37203 37919 0.89 - 0 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	360 scaffold14 AUGUSTUS CDS 37966 38138 0.43 - 2 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	361 scaffold14 AUGUSTUS CDS 38193 38214 0.96 - 0 ID=g11.t1.cds;Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	362 scaffold14 AUGUSTUS start_codon 38212 38214 . - 0 Parent=g11.t1
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	363 # coding sequence = [atgtctagatactctcgcattgttaacatagacttggtcataggagagagcggccgctacgatgaagacgctcctaacc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	364 # gctacagtcggcctgatgcggtgccgcttcaacatattcccagtcatgaggactttgctacggatggacaacattcctacatggatacccgggatcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	365 # ctcgccgcccagccgacctactccgttgataatctagcttactcttatggacttagagaagcatacgagtcaacattccagaacatcccagagcatcc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	366 # gggccgccagcattatgattcacatccagctgaagaagcagatccagcgtattatgacgatgatgataccagaccaatgctagatcgtcaccacagta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	367 # acgatgccagtagttcttcggtgacactgacagtgcaggtcccgagatgggccaccatccagtatgtcccattgttcaaaggcaacctggttttggac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	368 # tgtccagtcccatcaaaattggtcaatcagttggcgacaggggatgaacagcctcgtgaatctacgcacatgagatattcagcagcaacttgcgatcc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	369 # cgccgattttcttgacaaccgattcacattgcgccaaaaattatatcaacaaccgagagcagttgaactcttcatcgttgtcacaatgtacaatgaag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	370 # acgatgcgctgctggcgagaacattgatagggattttccagaatgtcaattacatggaaagtttgagggatagcacgatgtggggtgctaacgcctgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	371 # aagaagatagtagtgtgcatcgttagtgacggaatcgcgaagatcaatccccgttctgcagcacttcttgctggtctgggtgtctttcagcaaggcat
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	372 # tgccaaagctaagatcaacaaactcgagaccgaggcccatatattcgagtacacaacgcaaatggaaccagtaatgagaggcgagacagtctccgtcc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	373 # agaagggcaacactccggttcaactgctcttctgcttgaagcaaaagaatgcgcagaagatcaattcgcatcgctggttctttcaagcctttggcaga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	374 # tgtctcgagcctaatatttgtgtactgctcgatgctggaaccaaacctggtaagcactcgatattcaaactttggaacgttttcgatcgaaacagaca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	375 # ttgtgccggcgcttgtggagagatcaaggcagacttaggaagagggggtaaaaacttgttgaatccattggtcgcgactcaaaactttgaatataaga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	376 # tgtcgaatatacttgataagcctctggaatcagctttcggcttcatctcggtccttccaggagccttctctgcttataggtacgaggctcttcaagga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	377 # gaacccatggtcaaatattttgctggagagaaaatgcacaataacagcaatttctttactgcgaatatgtacctggctgaggaccgaattctatgtta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	378 # cgagctggtggcaaagaagggcagcaaatgggttctccaatacgtaaagaactccacaggagaaacagatgttccgacagaagtgcctgacttcatct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	379 # cgcaacgtcggagatggcttaacggtagtctcttcgctgctgtttacaccgtggtccatttctggaaaatctggcaatccggccacgggtttgttcga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	380 # aagtgcatgctgcagatcgaagtagtctaccaggtcattagcatgatctttgcttggttcgccttgggcaacttttacttggtcttcaaaattcttgt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	381 # gggctcgctgggtgatccgactttacttggaaaagcaggtttggtgctatcggtattcttcgagtggtcttatgtcatctgcctcatcgcttgcttca
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	382 # ttctcgccttgggcaatacgccgaaaggaacgaagaaggtctatgttggcatgaccatctattgggcaatcgtgatgacttacctcatgtttgccact
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	383 # gtctatctcagcgtcaaatctgtccagtcggaaatcaaagatggctttaagattggcgatttgctgacgaataagacctttgcgacacttattctctc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	384 # tatgctttccacctacgtcttgtgtcaaaccctcaaatgtatcggctcatttgctaacaacacaatagggggcactaaaggcgccaacgatgcacctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	385 # gaggcggttcagtcgcctctggaaaagacggcaaagcaggtgtcgagcttccatccgatccagacgctcaatacaagaaagagctcgaagtcctcgcc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	386 # gaggcacgcaaagaagaagagtcgaaaacaagcgacgaagatgtcaagaaattctactacgcttctgttcgcagctggatcgtgatggcgtggatatt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	387 # cagcaacttgtcgttgatcacccttgtgatgaaagccggttcggtcgggatcattaccaagaccaagacgagtgaggaggaggcgcagcgcaagaact
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	388 # ctgacctttacctctacattatcttgtggagtgtagcgggactcagtgcgttcagatttgttggctcggtttggttcttgattcatagaaagtttgct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	389 # gggatctga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	390 # protein sequence = [MSRYSRIVNIDLVIGESGRYDEDAPNRYSRPDAVPLQHIPSHEDFATDGQHSYMDTRDRLAAQPTYSVDNLAYSYGLR
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	391 # EAYESTFQNIPEHPGRQHYDSHPAEEADPAYYDDDDTRPMLDRHHSNDASSSSVTLTVQVPRWATIQYVPLFKGNLVLDCPVPSKLVNQLATGDEQPR
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	392 # ESTHMRYSAATCDPADFLDNRFTLRQKLYQQPRAVELFIVVTMYNEDDALLARTLIGIFQNVNYMESLRDSTMWGANAWKKIVVCIVSDGIAKINPRS
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	393 # AALLAGLGVFQQGIAKAKINKLETEAHIFEYTTQMEPVMRGETVSVQKGNTPVQLLFCLKQKNAQKINSHRWFFQAFGRCLEPNICVLLDAGTKPGKH
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	394 # SIFKLWNVFDRNRHCAGACGEIKADLGRGGKNLLNPLVATQNFEYKMSNILDKPLESAFGFISVLPGAFSAYRYEALQGEPMVKYFAGEKMHNNSNFF
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	395 # TANMYLAEDRILCYELVAKKGSKWVLQYVKNSTGETDVPTEVPDFISQRRRWLNGSLFAAVYTVVHFWKIWQSGHGFVRKCMLQIEVVYQVISMIFAW
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	396 # FALGNFYLVFKILVGSLGDPTLLGKAGLVLSVFFEWSYVICLIACFILALGNTPKGTKKVYVGMTIYWAIVMTYLMFATVYLSVKSVQSEIKDGFKIG
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	397 # DLLTNKTFATLILSMLSTYVLCQTLKCIGSFANNTIGGTKGANDAPGGGSVASGKDGKAGVELPSDPDAQYKKELEVLAEARKEEESKTSDEDVKKFY
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	398 # YASVRSWIVMAWIFSNLSLITLVMKAGSVGIITKTKTSEEEAQRKNSDLYLYIILWSVAGLSAFRFVGSVWFLIHRKFAGI]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	399 scaffold14 AUGUSTUS transcript 34994 38214 0.17 - . ID=g11.t2;Parent=g11
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	400 scaffold14 AUGUSTUS stop_codon 34994 34996 . - 0 Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	401 scaffold14 AUGUSTUS intron 35009 35061 1 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	402 scaffold14 AUGUSTUS intron 35522 35657 0.87 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	403 scaffold14 AUGUSTUS intron 35799 35851 1 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	404 scaffold14 AUGUSTUS intron 36061 36125 1 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	405 scaffold14 AUGUSTUS intron 36290 36340 1 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	406 scaffold14 AUGUSTUS intron 36978 37202 0.99 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	407 scaffold14 AUGUSTUS intron 37920 37965 0.89 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	408 scaffold14 AUGUSTUS intron 38118 38192 0.26 - . Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	409 scaffold14 AUGUSTUS CDS 34994 35008 1 - 0 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	410 scaffold14 AUGUSTUS CDS 35062 35521 1 - 1 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	411 scaffold14 AUGUSTUS CDS 35658 35798 0.87 - 1 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	412 scaffold14 AUGUSTUS CDS 35852 36060 1 - 0 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	413 scaffold14 AUGUSTUS CDS 36126 36289 1 - 2 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	414 scaffold14 AUGUSTUS CDS 36341 36977 0.88 - 0 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	415 scaffold14 AUGUSTUS CDS 37203 37919 0.89 - 0 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	416 scaffold14 AUGUSTUS CDS 37966 38117 0.25 - 2 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	417 scaffold14 AUGUSTUS CDS 38193 38214 0.96 - 0 ID=g11.t2.cds;Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	418 scaffold14 AUGUSTUS start_codon 38212 38214 . - 0 Parent=g11.t2
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	419 # coding sequence = [atgtctagatactctcgcattggagagagcggccgctacgatgaagacgctcctaaccgctacagtcggcctgatgcgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	420 # tgccgcttcaacatattcccagtcatgaggactttgctacggatggacaacattcctacatggatacccgggatcgactcgccgcccagccgacctac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	421 # tccgttgataatctagcttactcttatggacttagagaagcatacgagtcaacattccagaacatcccagagcatccgggccgccagcattatgattc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	422 # acatccagctgaagaagcagatccagcgtattatgacgatgatgataccagaccaatgctagatcgtcaccacagtaacgatgccagtagttcttcgg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	423 # tgacactgacagtgcaggtcccgagatgggccaccatccagtatgtcccattgttcaaaggcaacctggttttggactgtccagtcccatcaaaattg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	424 # gtcaatcagttggcgacaggggatgaacagcctcgtgaatctacgcacatgagatattcagcagcaacttgcgatcccgccgattttcttgacaaccg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	425 # attcacattgcgccaaaaattatatcaacaaccgagagcagttgaactcttcatcgttgtcacaatgtacaatgaagacgatgcgctgctggcgagaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	426 # cattgatagggattttccagaatgtcaattacatggaaagtttgagggatagcacgatgtggggtgctaacgcctggaagaagatagtagtgtgcatc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	427 # gttagtgacggaatcgcgaagatcaatccccgttctgcagcacttcttgctggtctgggtgtctttcagcaaggcattgccaaagctaagatcaacaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	428 # actcgagaccgaggcccatatattcgagtacacaacgcaaatggaaccagtaatgagaggcgagacagtctccgtccagaagggcaacactccggttc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	429 # aactgctcttctgcttgaagcaaaagaatgcgcagaagatcaattcgcatcgctggttctttcaagcctttggcagatgtctcgagcctaatatttgt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	430 # gtactgctcgatgctggaaccaaacctggtaagcactcgatattcaaactttggaacgttttcgatcgaaacagacattgtgccggcgcttgtggaga
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	431 # gatcaaggcagacttaggaagagggggtaaaaacttgttgaatccattggtcgcgactcaaaactttgaatataagatgtcgaatatacttgataagc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	432 # ctctggaatcagctttcggcttcatctcggtccttccaggagccttctctgcttataggtacgaggctcttcaaggagaacccatggtcaaatatttt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	433 # gctggagagaaaatgcacaataacagcaatttctttactgcgaatatgtacctggctgaggaccgaattctatgttacgagctggtggcaaagaaggg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	434 # cagcaaatgggttctccaatacgtaaagaactccacaggagaaacagatgttccgacagaagtgcctgacttcatctcgcaacgtcggagatggctta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	435 # acggtagtctcttcgctgctgtttacaccgtggtccatttctggaaaatctggcaatccggccacgggtttgttcgaaagtgcatgctgcagatcgaa
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	436 # gtagtctaccaggtcattagcatgatctttgcttggttcgccttgggcaacttttacttggtcttcaaaattcttgtgggctcgctgggtgatccgac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	437 # tttacttggaaaagcaggtttggtgctatcggtattcttcgagtggtcttatgtcatctgcctcatcgcttgcttcattctcgccttgggcaatacgc
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	438 # cgaaaggaacgaagaaggtctatgttggcatgaccatctattgggcaatcgtgatgacttacctcatgtttgccactgtctatctcagcgtcaaatct
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	439 # gtccagtcggaaatcaaagatggctttaagattggcgatttgctgacgaataagacctttgcgacacttattctctctatgctttccacctacgtctt
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	440 # gtgtcaaaccctcaaatgtatcggctcatttgctaacaacacaatagggggcactaaaggcgccaacgatgcacctggaggcggttcagtcgcctctg
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	441 # gaaaagacggcaaagcaggtgtcgagcttccatccgatccagacgctcaatacaagaaagagctcgaagtcctcgccgaggcacgcaaagaagaagag
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	442 # tcgaaaacaagcgacgaagatgtcaagaaattctactacgcttctgttcgcagctggatcgtgatggcgtggatattcagcaacttgtcgttgatcac
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	443 # ccttgtgatgaaagccggttcggtcgggatcattaccaagaccaagacgagtgaggaggaggcgcagcgcaagaactctgacctttacctctacatta
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	444 # tcttgtggagtgtagcgggactcagtgcgttcagatttgttggctcggtttggttcttgattcatagaaagtttgctgggatctga]
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	445 # protein sequence = [MSRYSRIGESGRYDEDAPNRYSRPDAVPLQHIPSHEDFATDGQHSYMDTRDRLAAQPTYSVDNLAYSYGLREAYESTF
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	446 # QNIPEHPGRQHYDSHPAEEADPAYYDDDDTRPMLDRHHSNDASSSSVTLTVQVPRWATIQYVPLFKGNLVLDCPVPSKLVNQLATGDEQPRESTHMRY
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	447 # SAATCDPADFLDNRFTLRQKLYQQPRAVELFIVVTMYNEDDALLARTLIGIFQNVNYMESLRDSTMWGANAWKKIVVCIVSDGIAKINPRSAALLAGL
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	448 # GVFQQGIAKAKINKLETEAHIFEYTTQMEPVMRGETVSVQKGNTPVQLLFCLKQKNAQKINSHRWFFQAFGRCLEPNICVLLDAGTKPGKHSIFKLWN
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	449 # VFDRNRHCAGACGEIKADLGRGGKNLLNPLVATQNFEYKMSNILDKPLESAFGFISVLPGAFSAYRYEALQGEPMVKYFAGEKMHNNSNFFTANMYLA
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	450 # EDRILCYELVAKKGSKWVLQYVKNSTGETDVPTEVPDFISQRRRWLNGSLFAAVYTVVHFWKIWQSGHGFVRKCMLQIEVVYQVISMIFAWFALGNFY
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	451 # LVFKILVGSLGDPTLLGKAGLVLSVFFEWSYVICLIACFILALGNTPKGTKKVYVGMTIYWAIVMTYLMFATVYLSVKSVQSEIKDGFKIGDLLTNKT
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	452 # FATLILSMLSTYVLCQTLKCIGSFANNTIGGTKGANDAPGGGSVASGKDGKAGVELPSDPDAQYKKELEVLAEARKEEESKTSDEDVKKFYYASVRSW
28067ed4ea0e Docker support and update for protk 1.4 iracooke parents: diff changeset	453 # IVMAWIFSNLSLITLVMKAGSVGIITKTKTSEEEAQRKNSDLYLYIILWSVAGLSAFRFVGSVWFLIHRKFAGI]

Mercurial > repos > iracooke > protk_proteogenomics

annotate test-data/augustus_sample.gff @ 3:86fd1757f102 draft default tip