Mercurial > repos > iracooke > tpp_prophets

diff peptide_prophet.xml @ 13:b793fe628648 draft

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Uploaded
author iracooke
date Tue, 01 Jul 2014 11:16:41 -0400
parents 4c66453a168e
children d90c8bc10a9c
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--- a/peptide_prophet.xml	Mon Jun 16 07:17:09 2014 -0400
+++ b/peptide_prophet.xml	Tue Jul 01 11:16:41 2014 -0400
@@ -31,7 +31,7 @@
     <param name="input_file" type="data" format="raw_pepxml" multiple="false" label="Raw Search Results" help="These files will typically be outputs from omssa or xtandem search tools"/>
 
 	<param name="glyco" type="boolean" label="Expect true positives to have a glycocapture motif" truevalue="--glyco" falsevalue=""/>
-	<param name="useicat" type="boolean" label="Use icat information" truevalue="--useicat" falsevalue="--no-useicat"/>
+	<param name="useicat" type="boolean" label="Use icat information" truevalue="--useicat" falsevalue=""/>
 	<param name="phospho" type="boolean" label="Use phospho information" truevalue="--phospho" falsevalue=""/>
 	<param name="usepi" type="boolean" label="Use pI information" truevalue="--usepi" falsevalue=""/>
 	<param name="usert" type="boolean" label="Use hydrophobicity / RT information" truevalue="--usert" falsevalue=""/>