Mercurial > repos > iracooke > xtandem
comparison tool-data/pepxml_databases.loc.sample @ 11:618d74240c7f draft
Uploaded
| author | iracooke |
|---|---|
| date | Mon, 16 Jun 2014 05:47:55 -0400 |
| parents | 29896659f3ea |
| children |
comparison
equal
deleted
inserted
replaced
| 10:ffd1d25b8080 | 11:618d74240c7f |
|---|---|
| 1 #This file lists the names of protein databases installed locally in protk. | |
| 2 # These are used by omssa and x!tandem as well as the "mascot to pepxml" tool | |
| 3 # In order to combine search results with Interprophet searches must be run against an identical database | |
| 4 # | |
| 5 # Entries should follow the be structured as follows | |
| 6 # Display_name omssa_tandem_dbname dbkey | |
| 7 # | |
| 8 # | |
| 9 Swissprot spall_ spall spall_ | |
| 10 Combined PlasmboDB (falciparum) and Swissprot Human plasmodb_pfalciparum_sphuman_ plasmodb_pfalciparum_sphuman plasmodb_pfalciparum_sphuman_ | |
| 11 Swissprot Human sphuman_ sphuman sphuman_ | |
| 12 Combined Swissprot/TRembl Human sptrhuman_ sptrhuman sptrhuman_ | |
| 13 Swissprot Mouse spmouse_ spmouse spmouse_ |