Mercurial > repos > iuc > abricate
diff test-data/output_mrsa.txt @ 6:1bb2ba6d3d96 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit b769b4cb086cc95f08ddf5da12e17faff3c689cc"
| author | iuc |
|---|---|
| date | Mon, 07 Oct 2019 14:57:31 -0400 |
| parents | f9bf6a8d8547 |
| children | 4efdca267d51 |
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--- a/test-data/output_mrsa.txt Wed Sep 11 23:57:17 2019 -0400 +++ b/test-data/output_mrsa.txt Mon Oct 07 14:57:31 2019 -0400 @@ -1,9 +1,9 @@ #FILE SEQUENCE START END GENE COVERAGE COVERAGE_MAP GAPS %COVERAGE %IDENTITY DATABASE ACCESSION PRODUCT -MRSA0252.fna gi|49482253|ref|NC_002952.2| 40786 41556 aadD_2 1-771/771 =============== 0/0 100.00 100.00 resfinder M19465_dupe resfinder~~~aadD_2~~~M19465_dupe Alternate name; ant(4')-Ia and aadD2 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 44919 46925 mecA_6 1-2007/2007 =============== 0/0 100.00 100.00 resfinder BX571856 resfinder~~~mecA_6~~~BX571856 mecA_6 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 55890 56621 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 resfinder~~~erm(A)_1~~~X03216 erm(A)_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 56747 57529 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 resfinder~~~ant(9)-Ia_1~~~X02588 ant(9)-Ia_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1796513 1797244 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 resfinder~~~erm(A)_1~~~X03216 erm(A)_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1797370 1798152 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 resfinder~~~ant(9)-Ia_1~~~X02588 ant(9)-Ia_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1913785 1914672 blaZ_78 1-888/888 =============== 0/0 100.00 99.66 resfinder KU607301 resfinder~~~blaZ_78~~~KU607301 blaZ_78 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 2488459 2488878 fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 resfinder~~~fosD_1~~~KC989517 fosD_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 40786 41556 aadD_1 1-771/771 =============== 0/0 100.00 99.74 resfinder AF181950 Alternate name; ant(4')-Ia and aadD2 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 44919 46925 mecA_6 1-2007/2007 =============== 0/0 100.00 100.00 resfinder BX571856 mecA_6 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 55890 56621 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 56747 57529 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1796513 1797244 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1797370 1798152 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1913785 1914672 blaZ_78 1-888/888 =============== 0/0 100.00 99.66 resfinder KU607301 blaZ_78 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 2488459 2488878 fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 fosD_1