Mercurial > repos > iuc > abricate
diff test-data/output_noheader.txt @ 7:4efdca267d51 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit 6535538b7767c3bbe20ac7e89b682154b595c932"
author | iuc |
---|---|
date | Tue, 29 Oct 2019 19:24:59 -0400 |
parents | 1bb2ba6d3d96 |
children | b734db305578 |
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--- a/test-data/output_noheader.txt Mon Oct 07 14:57:31 2019 -0400 +++ b/test-data/output_noheader.txt Tue Oct 29 19:24:59 2019 -0400 @@ -1,8 +1,8 @@ -MRSA0252.fna gi|49482253|ref|NC_002952.2| 40786 41556 aadD_1 1-771/771 =============== 0/0 100.00 99.74 resfinder AF181950 Alternate name; ant(4')-Ia and aadD2 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 44919 46925 mecA_6 1-2007/2007 =============== 0/0 100.00 100.00 resfinder BX571856 mecA_6 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 55890 56621 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 56747 57529 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1796513 1797244 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1797370 1798152 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia_1 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 1913785 1914672 blaZ_78 1-888/888 =============== 0/0 100.00 99.66 resfinder KU607301 blaZ_78 -MRSA0252.fna gi|49482253|ref|NC_002952.2| 2488459 2488878 fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 fosD_1 +MRSA0252.fna gi|49482253|ref|NC_002952.2| 40786 41556 - aadD_1 1-771/771 =============== 0/0 100.00 99.74 resfinder AF181950 aadD Amikacin;Tobramycin +MRSA0252.fna gi|49482253|ref|NC_002952.2| 44919 46925 - mecA_6 1-2007/2007 =============== 0/0 100.00 100.00 resfinder BX571856 mecA Amoxicillin;Amoxicillin+Clavulanic_acid;Ampicillin;Ampicillin+Clavulanic_acid;Cefepime;Cefixime;Cefotaxime;Cefoxitin;Ceftazidime;Ertapenem;Imipenem;Meropenem;Piperacillin;Piperacillin+Tazobactam +MRSA0252.fna gi|49482253|ref|NC_002952.2| 55890 56621 + erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A) Erythromycin;Lincomycin;Clindamycin;Quinupristin;Pristinamycin_IA;Virginiamycin_S +MRSA0252.fna gi|49482253|ref|NC_002952.2| 56747 57529 - ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1796513 1797244 + erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A) Erythromycin;Lincomycin;Clindamycin;Quinupristin;Pristinamycin_IA;Virginiamycin_S +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1797370 1798152 - ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 ant(9)-Ia +MRSA0252.fna gi|49482253|ref|NC_002952.2| 1913785 1914672 + blaZ_78 1-888/888 =============== 0/0 100.00 99.66 resfinder KU607301 blaZ Amoxicillin;Ampicillin;Penicillin;Piperacillin +MRSA0252.fna gi|49482253|ref|NC_002952.2| 2488459 2488878 + fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 fosD Fosfomycin