Mercurial > repos > iuc > abricate
view abricate_list.xml @ 6:1bb2ba6d3d96 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit b769b4cb086cc95f08ddf5da12e17faff3c689cc"
author | iuc |
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date | Mon, 07 Oct 2019 14:57:31 -0400 |
parents | 78c75f134c16 |
children | c2ef298da409 |
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<tool id="abricate_list" name="ABRicate List" version="@VERSION@"> <description> List all of abricate's available databases. </description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <expand macro="version_command" /> <command detect_errors="exit_code"><![CDATA[ abricate --list > '$report' ]]></command> <inputs> </inputs> <outputs> <data name="report" format="txt" label="${tool.name} - list of databases"/> </outputs> <tests> <test> <output name="report" ftype="txt" file="output_list.txt" compare="contains" /> </test> </tests> <help><![CDATA[ **What it does** ABRicate List will list all the antibiotic databases used by ABRicate. The database of these genes is built from ResFinder. ]]></help> <expand macro="citations"/> </tool>