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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit 962161e1dde26559d0bc1ce5d7b75d2f354606c5
author | iuc |
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date | Mon, 04 Sep 2017 02:47:12 -0400 |
parents | 2aa02d2a6af3 |
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LOCUS STANORAX 1601 bp DNA linear BCT 27-MAY-1993 DEFINITION Staphylococcus aureus fluoroquinolone resistance protein (norA) gene, complete cds. ACCESSION M97169 VERSION M97169.1 KEYWORDS fluoroquinolone resistance protein; norA gene. SOURCE Staphylococcus aureus ORGANISM Staphylococcus aureus Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus. REFERENCE 1 (bases 1 to 1601) AUTHORS Kaatz,G.W., Seo,S.M. and Ruble,C.A. TITLE Efflux-mediated fluoroquinolone resistance in Staphylococcus aureus JOURNAL Antimicrob. Agents Chemother. 37 (5), 1086-1094 (1993) PUBMED 8517696 FEATURES Location/Qualifiers source 1..1601 /organism="Staphylococcus aureus" /mol_type="genomic DNA" /db_xref="taxon:1280" gene 117..1412 /gene="norA" regulatory 117..122 /regulatory_class="minus_35_signal" /gene="norA" /note="putative" regulatory 141..146 /regulatory_class="minus_10_signal" /gene="norA" CDS 246..1412 /gene="norA" /function="fluoroquinolone efflux" /standard_name="NORA1199 wild-type gene" /codon_start=1 /transl_table=11 /protein_id="AAA26658.1" /translation="MNKQILVLYFNIFLIFLGIGLVIPVLPVYLKDLGLTGSDLGLLV AAFALSQMIISPFGGTLADKLGKKLIICIGLILFSVSEFMFAIGQNFLILMLSRVIGG MSAGMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFY FAGALGILAFIMSIVLIHDPKKVSTNGFQKLEPQLLTKINWKVFITPVILTLVLSFGL SAFETLYSLYTADKVNYSPKDISIAITGGGIFGALFQIYFFDKFMKYFSELTFIAWSL IYSVIVLVLLVIADGYWTIMVISFVVFIGFDMIRPAITNYFSNIAGDRQGFAGGLNST FTSMGNFIGPLIAGALFDVHIEAPIYMAIGVSLAGVVIVLIEKQHRAKLKQQDL" ORIGIN 1 ctagtagtat agtatgatta cttttttgca atttcatatg atcaatcccc tttattttaa 61 tatgtcatta attatacaat taaatggaaa atagtgataa ttacaaagaa aaaatattgt 121 caaatgtagc aatattgtaa tacaatatag aaacttttta cgaatattta gcatgaattg 181 caatctgtcg tggaaaagaa aaataacagc ttgaagagtg acaagtagaa aaaagaggtg 241 agcaaatgaa taaacagatt ttggtattat attttaatat tttcttaatt tttttaggta 301 tcggtctagt gataccagtc ttacctgttt atttaaaaga tttggggtta actggtagtg 361 atttaggatt attagttgct gctttcgcct tatctcaaat gattatatcg ccattcggtg 421 gtacgttagc tgataaatta ggaaagaaat taattatatg tataggatta attttgtttt 481 cagtgtcaga atttatgttt gctatcggtc agaatttttt aattttgatg ttatcaaggg 541 ttatcggtgg tatgagtgct ggtatggtta tgcctggggt gacaggttta atagctgata 601 tttcaccaag ccatcaaaaa gcaaaaaact ttggctacat gtcagcgatt atcaattcag 661 gattcatttt aggaccaggg attggtggat ttatggcaga agtttcacat cgtatgccat 721 tttattttgc aggtgcatta ggtattctag catttataat gtcaattgta ttgattcacg 781 accctaaaaa agtttcgaca aatggattcc aaaagttgga gccacaattg ctaacgaaaa 841 ttaactggaa agtgtttatt acaccagtta ttctaacact tgtattatcg tttggtttat 901 ctgcatttga aacattgtat tcactataca cagctgacaa ggtaaattat tcacctaaag 961 atatttcgat tgcaattaca ggtggcggta tctttggtgc acttttccaa atttatttct 1021 ttgataaatt tatgaaatac ttctctgagt taacatttat tgcatggtca ttaatatatt 1081 cagttattgt attagtgcta ttagttattg ccgatggtta ctggacaatt atggtaataa 1141 gctttgttgt ctttatcggg ttcgatatga taagacctgc tattacaaat tatttttcaa 1201 atattgctgg tgatagacag ggatttgcag gtgggttaaa ctcaacattc actagcatgg 1261 ggaattttat aggtccttta atcgcaggtg cgttatttga tgtgcacatt gaagccccaa 1321 tttatatggc tataggtgtg tcattagctg gtgttgtcat tgttttaatt gaaaagcaac 1381 atagagctaa gttaaaacaa caagatttgt aatatcgcac atggttgtca ttcgattaat 1441 gtttttcgac aactaaagca tttcaaaata agcatcgatt ttcttacaat tatagtgaag 1501 aaaagtcgat gctttaaatt tataaagatt aaaaactttt aaatgtttta gtctttatat 1561 ttaaatgtta tatgtaacaa aaaatgattt tgagtaataa a //