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comparison abritamr.xml @ 2:3719342715a8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abritamr commit 4b95b96461684de086fe7e8086af9385f3ed7930
author iuc
date Wed, 20 Dec 2023 18:02:46 +0000
parents f564aae1b543
children 5aaffb8d8161
comparison
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1:f564aae1b543 2:3719342715a8
62 <param name="contig" value="CP009102.1.fasta" /> 62 <param name="contig" value="CP009102.1.fasta" />
63 <param name="log_file" value="true" /> 63 <param name="log_file" value="true" />
64 <output name="virulence_summary" ftype="txt"> 64 <output name="virulence_summary" ftype="txt">
65 <assert_contents> 65 <assert_contents>
66 <has_n_lines n="2"/> 66 <has_n_lines n="2"/>
67 <has_text text="iroB,iroC,sinH"/> 67 <has_text text="sinH"/>
68 </assert_contents> 68 </assert_contents>
69 </output> 69 </output>
70 </test> 70 </test>
71 <!-- Multiple samples, no logfile --> 71 <!-- Multiple samples, no logfile -->
72 <test expect_num_outputs="4"> 72 <test expect_num_outputs="4">
75 <param name="identity" value="0.9" /> 75 <param name="identity" value="0.9" />
76 <param name="log_file" value="false" /> 76 <param name="log_file" value="false" />
77 <output name="virulence_summary" ftype="txt"> 77 <output name="virulence_summary" ftype="txt">
78 <assert_contents> 78 <assert_contents>
79 <has_n_lines n="3"/> 79 <has_n_lines n="3"/>
80 <has_text text="NC_003198.1_1kb.fasta"/>
80 </assert_contents> 81 </assert_contents>
81 </output> 82 </output>
82 </test> 83 </test>
83 </tests> 84 </tests>
84 <help> 85 <help>