Mercurial > repos > iuc > abyss

comparison abyss-pe.xml @ 14:d6d5ccc2c581 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abyss commit cbe1a5975621eb02d0d5e38ff7b4bd8b67108a16
author iuc
date Wed, 18 Sep 2024 16:21:03 +0000
parents 0124fce4654a
children
comparison
equal deleted inserted replaced
13:0124fce4654a 14:d6d5ccc2c581
1 <tool id="abyss-pe" name="ABySS" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> 1 <tool id="abyss-pe" name="ABySS" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
2 <description>de novo sequence assembler</description> 2 <description>de novo sequence assembler</description>
3 <macros> 3 <macros>
4 <token name="@TOOL_VERSION@">2.3.7</token> 4 <token name="@TOOL_VERSION@">2.3.9</token>
5 <token name="@VERSION_SUFFIX@">0</token> 5 <token name="@VERSION_SUFFIX@">0</token>
6 <xml name="reads_conditional"> 6 <xml name="reads_conditional">
7 <conditional name="reads"> 7 <conditional name="reads">
8 <param name="reads_selector" type="select" label="Type of paired-end datasets"> 8 <param name="reads_selector" type="select" label="Type of paired-end datasets">
9 <option value="paired">2 separate datasets</option> 9 <option value="paired">2 separate datasets</option>
26 <xrefs> 26 <xrefs>
27 <xref type="bio.tools">abyss</xref> 27 <xref type="bio.tools">abyss</xref>
28 </xrefs> 28 </xrefs>
29 <requirements> 29 <requirements>
30 <requirement type="package" version="@TOOL_VERSION@">abyss</requirement> 30 <requirement type="package" version="@TOOL_VERSION@">abyss</requirement>
31 <requirement type="package" version="0.7.17">bwa</requirement> 31 <requirement type="package" version="0.7.18">bwa</requirement>
32 </requirements> 32 </requirements>
33 <stdio> 33 <stdio>
34 <!-- Anything other than zero is an error --> 34 <!-- Anything other than zero is an error -->
35 <exit_code range="1:" /> 35 <exit_code range="1:" />
36 <!-- In case the return code has not been set propery check stderr too --> 36 <!-- In case the return code has not been set propery check stderr too -->