comparison test-data/ARTIC-V5.3.2.fasta @ 0:d5fc5d888a46 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ampligone commit 5bd763da003ce033467702f2fb4dca5264e0be43
author iuc
date Tue, 29 Jul 2025 10:18:37 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:d5fc5d888a46
1 >MN908947.3:47-78_LEFT
2 CTCTTGTAGATCTGTTCTCTAAACGAACTTT
3 >MN908947.3:419-447_RIGHT
4 GCTTAGTAGAAGTTGAAAAAGGCGTTTT
5 >MN908947.3:344-366_LEFT
6 TCGTACGTGGCTTTGGAGACTC
7 >MN908947.3:707-732_RIGHT
8 AGCTTGGCACTGATCCTTATGAAGA
9 >MN908947.3:638-661_LEFT
10 AGAACGGTAATAAAGGAGCTGGT
11 >MN908947.3:1018-1047_RIGHT
12 CAGACACCTTTTGAAATTAAATTGGCAAA
13 >MN908947.3:970-995_LEFT
14 CATGAAATTGCTTGGTACACGGAAC
15 >MN908947.3:1340-1370_RIGHT
16 ACTTACCCCAAAATGCTGTTGTTAAAATTT
17 >MN908947.3:1292-1320_LEFT
18 TTTGTGGCACTGAGAATTTGACTAAAGA
19 >MN908947.3:1660-1692_RIGHT
20 GACTTTAAACTTAATGAAGAGATCGCCATTAT
21 >MN908947.3:1574-1596_LEFT
22 GTGTTGTTGGAGAAGGTTCCGA
23 >MN908947.3:1945-1972_RIGHT
24 GTTTTACAGAAGGCCGCTATAACAATA
25 >MN908947.3:1882-1905_LEFT
26 GCTGCTCGTGTTGTACGATCAAT
27 >MN908947.3:2259-2284_RIGHT
28 CACCTGTGCAAAGGAAATTAAGGAG
29 >MN908947.3:2229-2252_LEFT
30 TGCTTGTGAAATTGTCGGTGGAC
31 >MN908947.3:2603-2629_RIGHT
32 GTACACCAGTTTGTATTAACGGGCTT
33 >MN908947.3:2533-2563_LEFT
34 GTCTTGAAAACTGGTGATTTACAACCATTA
35 >MN908947.3:2900-2933_RIGHT
36 TCATAAAAACTTTGCAACCAGTATCTGAATTAC
37 >MN908947.3:2854-2880_LEFT
38 CTCGGTACAGAAGTAAATGAGTTCGC
39 >MN908947.3:3233-3254_RIGHT
40 AACAAGACGGCAGTGAGGACA
41 >MN908947.3:3184-3213_LEFT
42 GAGCAAGAAGAAGATTGGTTAGATGATGA
43 >MN908947.3:3560-3584_RIGHT
44 TGGGTGGTAGTTGTGTTTTAAGCG
45 >MN908947.3:3510-3540_LEFT
46 CATGCAAGTTGAATCTGATGATTACATAGC
47 >MN908947.3:3883-3913_RIGHT
48 CCTAAAGAGGAAGTTAAGCCATTTATAACT
49 >MN908947.3:3791-3824_LEFT
50 CTGTCTTTGATAAAAATCTCTATGACAAACTTG
51 >MN908947.3:4147-4180_RIGHT
52 GTTTTAACTGCTGTGGTTATACCTACTAAAAAG
53 >MN908947.3:4079-4108_LEFT
54 GTGACATTGACATCACTTTCTTAAAGAAA
55 >MN908947.3:4457-4488_RIGHT
56 TAGTTTCAACTATACAGCGTAAATATAAGGG
57 >MN908947.3:4403-4425_LEFT
58 CACATGCAGAAGAAACACGCAA
59 >MN908947.3:4776-4803_RIGHT
60 CATCTCACTTGCTGGTTCCTATAAAGA
61 >MN908947.3:4723-4756_LEFT
62 AATGGTTATCTTACTTCTTCTTCTAAAACACCT
63 >MN908947.3:5089-5119_RIGHT
64 CCTCATAATTCACATGAAGGTAAAACATTT
65 >MN908947.3:5036-5063_LEFT
66 GACAACAGTTTGGTCCAACTTATTTGG
67 >MN908947.3:5398-5429_RIGHT
68 GCACTTATCTTAGCCTACTGTAATAAGACAG
69 >MN908947.3:5344-5370_LEFT
70 GCTCTACAAGATGCTTATTACAGAGC
71 >MN908947.3:5716-5744_RIGHT
72 CATGGTACATTTACTTGTGCTAGTGAGT
73 >MN908947.3:5671-5696_LEFT
74 CCTTTTGTTATGATGTCAGCACCAC
75 >MN908947.3:6031-6062_RIGHT
76 GCAAGCTTCGATAATTTTAAGTTTGTATGTG
77 >MN908947.3:5891-5923_LEFT
78 CCATAAAACCAGTTACTTATAAATTGGATGGT
79 >MN908947.3:6257-6288_RIGHT
80 CTAATAAAGCCACGTATAAACCAAATACCTG
81 >MN908947.3:6204-6237_LEFT
82 GAAAGGAGCTAAATTGTTACATAAACCTATTGT
83 >MN908947.3:6562-6595_RIGHT
84 GTAGACAATTCTAGTCTTACTATTAAGAAACCT
85 >MN908947.3:6515-6542_LEFT
86 TAAAAATTACAGAAGAGGTTGGCCACA
87 >MN908947.3:6882-6915_RIGHT
88 CGGTAAATTTTGTCTAGAGGCTTCATTTAATTA
89 >MN908947.3:6823-6854_LEFT
90 AATTCTAGAATTAAAGCATCTATGCCGACTA
91 >MN908947.3:7199-7229_RIGHT
92 CATCTTTTAAATGGGATTTAACTGCTTTTG
93 >MN908947.3:7145-7179_LEFT
94 GTTTAGATTCTTTAGACACCTATCCTTCTTTAGA
95 >MN908947.3:7518-7545_RIGHT
96 AACAAGAGTCGAATGTACAACTATTGT
97 >MN908947.3:7456-7482_LEFT
98 GTGCATGTTGTAGACGGTTGTAATTC
99 >MN908947.3:7819-7850_RIGHT
100 TCTCATTTTGTTAACTTAGACAACCTGAGAG
101 >MN908947.3:7768-7797_LEFT
102 CATCTTTACTTTGATAAAGCTGGTCAAAA
103 >MN908947.3:8136-8169_RIGHT
104 GTCCTTAGACAATGTCTTATCTACTTTTATTTC
105 >MN908947.3:8085-8112_LEFT
106 AAAACTCAAAACACTAGTTGCAACTGC
107 >MN908947.3:8468-8498_RIGHT
108 AGAATAACTTACCTTTTAAGTTGACATGTG
109 >MN908947.3:8406-8436_LEFT
110 CGTTAAAGATTTCATGTCATTGTCTGAACA
111 >MN908947.3:8781-8806_RIGHT
112 CCAGCGTGGTGGTAGTTATACTAAT
113 >MN908947.3:8732-8761_LEFT
114 CAGATACTTGTTTTGCTAACAAACATGCT
115 >MN908947.3:9107-9129_RIGHT
116 TACGCCCTGACACACGTTATGT
117 >MN908947.3:9023-9052_LEFT
118 CAATTTTTAAAGATGCTTCTGGTAAGCCA
119 >MN908947.3:9397-9423_RIGHT
120 GCATCTATAGTAGCTGGTGGTATTGT
121 >MN908947.3:9299-9324_LEFT
122 GATCTTTACCAGGAGTTTTCTGTGG
123 >MN908947.3:9673-9706_RIGHT
124 CCTTTCTGGATAACAATTGCTTATATCATTTGT
125 >MN908947.3:9571-9604_LEFT
126 GGTGTTTATTCTGTTATTTACTTGTACTTGACA
127 >MN908947.3:9949-9971_RIGHT
128 GCTGCTTGTTGTCATCTCGCAA
129 >MN908947.3:9896-9929_LEFT
130 ATAATAAGTACAAGTATTTTAGTGGAGCAATGG
131 >MN908947.3:10266-10295_RIGHT
132 TAATGTTCAACTCAGGGTTATTGGACATT
133 >MN908947.3:10215-10245_LEFT
134 TGAAGATTTACTCATTCGTAAGTCTAATCA
135 >MN908947.3:10587-10615_RIGHT
136 AGGTAACTTTTATGGACCTTTTGTTGAC
137 >MN908947.3:10527-10557_LEFT
138 TTTTTGTTACATGCACCATATGGAATTACC
139 >MN908947.3:10897-10927_RIGHT
140 TTGGGTAGTGCTTTATTAGAAGATGAATTT
141 >MN908947.3:10832-10865_LEFT
142 CCGTTTTAGATATGTGTGCTTCATTAAAAGAAT
143 >MN908947.3:11201-11232_RIGHT
144 CTGTAGCTTATTTTAATATGGTCTATATGCC
145 >MN908947.3:11152-11181_LEFT
146 AAACATAAGCATGCATTTCTCTGTTTGTT
147 >MN908947.3:11514-11536_RIGHT
148 TGTCATGTTTTTGGCCAGAGGT
149 >MN908947.3:11463-11494_LEFT
150 GTGGGCTCTTATAATCTCTGTTACTTCTAAC
151 >MN908947.3:11832-11863_RIGHT
152 CACTGTACAGTCTAAAATGTCAGATGTAAAG
153 >MN908947.3:11785-11811_LEFT
154 AACATTAAATTGTTGGGTGTTGGTGG
155 >MN908947.3:12161-12185_RIGHT
156 AGGCTGTTGCTAATGGTGATTCTG
157 >MN908947.3:12112-12137_LEFT
158 TCCCTTCCATCATATGCAGCTTTTG
159 >MN908947.3:12477-12510_RIGHT
160 GGTTGTCATACCAGACTATAACACATATAAAAA
161 >MN908947.3:12419-12444_LEFT
162 CAAGAGATGGTTGTGTTCCCTTGAA
163 >MN908947.3:12794-12819_RIGHT
164 GAGGTAGGTTTGTACTTGCACTGTT
165 >MN908947.3:12752-12774_LEFT
166 GCACTGATGACAATGCGTTAGC
167 >MN908947.3:13121-13146_RIGHT
168 GTGGGGGACAACCAATCACTAATTG
169 >MN908947.3:13075-13099_LEFT
170 GCTTTTGCTGTAGATGCTGCTAAA
171 >MN908947.3:13458-13480_RIGHT
172 GTTTTTAAACGGGTTTGCGGTG
173 >MN908947.3:13415-13435_LEFT
174 ATCAACTCCGCGAACCCATG
175 >MN908947.3:13787-13815_RIGHT
176 TCAACGTCTTACTAAATACACAATGGCA
177 >MN908947.3:13738-13767_LEFT
178 ACTTCTTTAAGTTTAGAATAGACGGTGAC
179 >MN908947.3:14120-14144_RIGHT
180 AGGTAGTGGAGTTCCTGTTGTAGA
181 >MN908947.3:14073-14100_LEFT
182 CTCAATGGTAACTGGTATGATTTCGGT
183 >MN908947.3:14427-14457_RIGHT
184 GTGAGAAAAATATTTGTTGATGGTGTTCCA
185 >MN908947.3:14375-14407_LEFT
186 CTTTAATGTTTTATTCTCTACAGTGTTCCCAC
187 >MN908947.3:14745-14775_RIGHT
188 GAATTAAAACACTTCTTCTTTGCTCAGGAT
189 >MN908947.3:14700-14725_LEFT
190 GACTTTGCTGTGTCTAAGGGTTTCT
191 >MN908947.3:15065-15095_RIGHT
192 GAATCTTAAGTATGCCATTAGTGCAAAGAA
193 >MN908947.3:15016-15045_LEFT
194 CACTTTTCGCATATACAAAACGTAATGTC
195 >MN908947.3:15386-15416_RIGHT
196 ACACCGTTTCTATAGATTAGCTAATGAGTG
197 >MN908947.3:15342-15366_LEFT
198 TCACTTGTTCTTGCTCGCAAACAT
199 >MN908947.3:15716-15742_RIGHT
200 TGACGATGCTGTTGTGTGTTTCAATA
201 >MN908947.3:15659-15688_LEFT
202 CTTTGTGAATGAGTTTTACGCATATTTGC
203 >MN908947.3:16028-16059_RIGHT
204 TATAGATGCTTACCCACTTACTAAACATCCT
205 >MN908947.3:15992-16018_LEFT
206 TGGTACACTTATGATTGAACGGTTCG
207 >MN908947.3:16386-16409_RIGHT
208 AATGCTCCAGGTTGTGATGTCAC
209 >MN908947.3:16285-16311_LEFT
210 GTGCTTGCATACGTAGACCATTCTTA
211 >MN908947.3:16650-16679_RIGHT
212 AAAGCTACTGAGGAGACATTTAAACTGTC
213 >MN908947.3:16624-16647_LEFT
214 TCAAGCTTTTTGCAGCAGAAACG
215 >MN908947.3:17004-17033_RIGHT
216 AATATCTCAGATGAGTTTTCTAGCAATGT
217 >MN908947.3:16962-16994_LEFT
218 CAAGAGCACTATGTTAGAATTACTGGCTTATA
219 >MN908947.3:17333-17362_RIGHT
220 GACAGCAGATATAGTTGTCTTTGATGAAA
221 >MN908947.3:17182-17212_LEFT
222 CACTATGTGAGAAGGCATTAAAATATTTGC
223 >MN908947.3:17560-17582_RIGHT
224 GGCGTTGTCCTGCTGAAATTGT
225 >MN908947.3:17478-17507_LEFT
226 GGCACACTAGAACCAGAATATTTCAATTC
227 >MN908947.3:17859-17886_RIGHT
228 GACTATGTCATATTCACTCAAACCACT
229 >MN908947.3:17813-17839_LEFT
230 GGGACTACCAACTCAAACTGTTGATT
231 >MN908947.3:18181-18212_RIGHT
232 ACATGACCTATAGAAGACTCATCTCTATGAT
233 >MN908947.3:18121-18153_LEFT
234 GTGTTGACACTAAATTCAAAACTGAAGGTTTA
235 >MN908947.3:18504-18527_RIGHT
236 GGACTTCCTTGGAATGTAGTGCG
237 >MN908947.3:18460-18484_LEFT
238 CGCCTGGAGATCAATTTAAACACC
239 >MN908947.3:18835-18860_RIGHT
240 ATGCACATGTAGCTAGTTGTGATGC
241 >MN908947.3:18789-18815_LEFT
242 GGTAACCTACAAAGCAACCATGATCT
243 >MN908947.3:19170-19195_RIGHT
244 ACAGATGGTGTATGCCTATTTTGGA
245 >MN908947.3:19087-19112_LEFT
246 TCTATGATGCACAGCCTTGTAGTGA
247 >MN908947.3:19469-19495_RIGHT
248 CAATTTAGGTGGTGCTGTCTGTAGAC
249 >MN908947.3:19415-19449_LEFT
250 AGTGTCAGATATAGATTATGTACCACTAAAGTCT
251 >MN908947.3:19770-19796_RIGHT
252 GTTAATGTAGCATTTGAGCTTTGGGC
253 >MN908947.3:19721-19750_LEFT
254 AGTTGATGGTGTTGATGTAGAATTGTTTG
255 >MN908947.3:20091-20121_RIGHT
256 AAACAAGCTAGTCTTAATGGAGTCACATTA
257 >MN908947.3:20028-20054_LEFT
258 GCCCGTAATGGTGTTCTTATTACAGA
259 >MN908947.3:20408-20441_RIGHT
260 TGAATTAGAAGATTTTATTCCTATGGACAGTAC
261 >MN908947.3:20358-20388_LEFT
262 GGTTTACATCTACTGATTGGACTAGCTAAA
263 >MN908947.3:20729-20758_RIGHT
264 GTGTGACCTTCAAAATTATGGTGATAGTG
265 >MN908947.3:20650-20676_LEFT
266 AATTACAATCTAGTCAAGCGTGGCAA
267 >MN908947.3:21018-21051_RIGHT
268 GCTAATAAATGGGATCTCATTATTAGTGATATG
269 >MN908947.3:20991-21018_LEFT
270 ATTGGTGATTGTGCAACTGTACATACA
271 >MN908947.3:21372-21402_RIGHT
272 TTGTCTTCCTATTCTTTATTTGACATGAGT
273 >MN908947.3:21322-21352_LEFT
274 ATGTCATGCATGCAAATTACATATTTTGGA
275 >MN908947.3:21696-21722_RIGHT
276 CTCAGTTTTACATTCAACTCAGGACT
277 >MN908947.3:21579-21607_LEFT
278 TTTATTGCCACTAGTCTCTAGTCAGTGT
279 >MN908947.3:21927-21960_RIGHT
280 CGCTACTAATGTTGTTATTAAAGTCTGTGAATT
281 >MN908947.3:21866-21894_LEFT
282 GAGGCTGGATTTTTGGTACTACTTTAGA
283 >MN908947.3:22238-22266_RIGHT
284 TGGTAGATTTGCCAATAGGTATTAACAT
285 >MN908947.3:22156-22189_LEFT
286 GGTTATTTTAAAATATATTCTAAGCACACGCCT
287 >MN908947.3:22517-22547_RIGHT
288 GAGTCCAACCAACAGAATCTATTGTTAGAT
289 >MN908947.3:22466-22494_LEFT
290 CGTTGAAATCCTTCACTGTAGAAAAAGG
291 >MN908947.3:22839-22866_RIGHT
292 AGATGATTTTACAGGCTGCGTTATAGC
293 >MN908947.3:22742-22774_LEFT
294 ATGTCTATGCAGATTCATTTGTAATTAGAGGT
295 >MN908947.3:23119-23140_RIGHT
296 GCACCAGCAACTGTTTGTGGA
297 >MN908947.3:23078-23109_LEFT
298 AACCATACAGAGTAGTAGTACTTTCTTTTGA
299 >MN908947.3:23452-23478_RIGHT
300 CCTACTTGGCGTGTTTATTCTACAGG
301 >MN908947.3:23229-23258_LEFT
302 CAAAAAGTTTCTGCCTTTCCAACAATTTG
303 >MN908947.3:23609-23631_RIGHT
304 GGGCACGTAGTGTAGCTAGTCA
305 >MN908947.3:23563-23589_LEFT
306 GCAGGTATATGCGCTAGTTATCAGAC
307 >MN908947.3:23914-23944_RIGHT
308 GTCAAACAAATTTACAAAACACCACCAATT
309 >MN908947.3:23823-23853_LEFT
310 GCAATATGGCAGTTTTTGTACACAATTAAA
311 >MN908947.3:24209-24231_RIGHT
312 CTTCTGGTTGGACCTTTGGTGC
313 >MN908947.3:24160-24189_LEFT
314 GATGAAATGATTGCTCAATACACTTCTGC
315 >MN908947.3:24535-24560_RIGHT
316 CAAATTGATAGGTTGATCACAGGCA
317 >MN908947.3:24442-24468_LEFT
318 ACGCTTGTTAAACAACTTAGCTCCAA
319 >MN908947.3:24815-24839_RIGHT
320 GAAAAGCACACTTTCCTCGTGAAG
321 >MN908947.3:24751-24774_LEFT
322 CATGTGACTTATGTCCCTGCACA
323 >MN908947.3:25120-25151_RIGHT
324 AATGAGGTTGCCAAGAATTTAAATGAATCTC
325 >MN908947.3:25053-25082_LEFT
326 TGATTTAGGTGACATCTCTGGCATTAATG
327 >MN908947.3:25423-25452_RIGHT
328 GAACTGTAACTTTGAAGCAAGGTGAAATC
329 >MN908947.3:25372-25402_LEFT
330 CATTACACATAAACGAACTTATGGATTTGT
331 >MN908947.3:25744-25777_RIGHT
332 TAAACTTTGTAAGAATAATAATGAGGCTTTGGC
333 >MN908947.3:25653-25680_LEFT
334 GTAACAGTTTACTCACACCTTTTGCTC
335 >MN908947.3:26048-26072_RIGHT
336 GAGTACAGACACTGGTGTTGAACA
337 >MN908947.3:26011-26039_LEFT
338 TCACTTCAGACTATTACCAGCTGTACTC
339 >MN908947.3:26382-26411_RIGHT
340 GTTAACGTGAGTCTTGTAAAACCTTCTTT
341 >MN908947.3:26339-26362_LEFT
342 CATCCTTACTGCGCTTCGATTGT
343 >MN908947.3:26730-26756_RIGHT
344 TTTACAGAATAAATTGGATCACCGGT
345 >MN908947.3:26593-26621_LEFT
346 AGGTTTCCTATTCCTTACATGGATTTGT
347 >MN908947.3:26989-27009_RIGHT
348 AGGACGCTGTGACATCAAGG
349 >MN908947.3:26958-26981_LEFT
350 GTGGACATCTTCGTATTGCTGGA
351 >MN908947.3:27349-27376_RIGHT
352 CTCAATTAGATGAAGAGCAACCAATGG
353 >MN908947.3:27200-27226_LEFT
354 GATGTTTCATCTCGTTGACTTTCAGG
355 >MN908947.3:27583-27603_RIGHT
356 CTTTTGCTTGTCCTGACGGC
357 >MN908947.3:27530-27558_LEFT
358 TCATCCTCTAGCTGATAACAAATTTGCA
359 >MN908947.3:27927-27950_RIGHT
360 CTGTAGCTGCATTTCACCAAGAA
361 >MN908947.3:27832-27860_LEFT
362 TATCTTTTGGTTCTCACTTGAACTGCAA
363 >MN908947.3:28209-28237_RIGHT
364 AAGACTTTTTAGAGTATCATGACGTTCG
365 >MN908947.3:28135-28166_LEFT
366 TTCCTGTTTACCTTTTACAATTAATTGCCAG
367 >MN908947.3:28513-28539_RIGHT
368 GATGACCAAATTGGCTACTACCGAAG
369 >MN908947.3:28473-28493_LEFT
370 TCGAGGACAAGGCGTTCCAA
371 >MN908947.3:28849-28873_RIGHT
372 AGTTCAAGAAATTCAACTCCAGGC
373 >MN908947.3:28808-28829_LEFT
374 GCAGTCAAGCCTCTTCTCGTT
375 >MN908947.3:29203-29224_RIGHT
376 GCTTCAGCGTTCTTCGGAATG
377 >MN908947.3:29159-29183_LEFT
378 CTGATTACAAACATTGGCCGCAAA
379 >MN908947.3:29538-29559_RIGHT
380 TGCAGACCACACAAGGCAGAT
381 >MN908947.3:29462-29486_LEFT
382 CTGCAGATTTGGATGATTTCTCCA
383 >MN908947.3:29840-29873_RIGHT
384 GTGATTTTAATAGCTTCTTAGGAGAATGACAAA