Mercurial > repos > iuc > ampvis2_boxplot

comparison boxplot.xml @ 4:b4c6f8741989 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit ab75ba7665d7fb5c18ad08dfbba92b273f991dfc
author iuc
date Sat, 16 Mar 2024 11:39:04 +0000
parents 6eae290d762b
children
comparison
equal deleted inserted replaced
3:6eae290d762b 4:b4c6f8741989
70 <expand macro="out_macro"/> 70 <expand macro="out_macro"/>
71 </outputs> 71 </outputs>
72 <tests> 72 <tests>
73 <test> 73 <test>
74 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> 74 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/>
75 <output name="plot" value="AalborgWWTPs-boxplot.pdf" ftype="pdf"/> 75 <output name="plot" value="AalborgWWTPs-boxplot.pdf" ftype="pdf" compare="sim_size"/>
76 </test> 76 </test>
77 <test> 77 <test>
78 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> 78 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/>
79 <param name="metadata_list" value="AalborgWWTPs-metadata.list"/> 79 <param name="metadata_list" value="AalborgWWTPs-metadata.list"/>
80 <param name="group_by" value="Plant"/> 80 <param name="group_by" value="Plant"/>
82 <param name="tax_show" value="5"/> 82 <param name="tax_show" value="5"/>
83 <param name="plot_flip" value="true"/> 83 <param name="plot_flip" value="true"/>
84 <param name="plot_log" value="true"/> 84 <param name="plot_log" value="true"/>
85 <param name="adjust_zero" value="100000"/> 85 <param name="adjust_zero" value="100000"/>
86 <param name="normalise" value="true"/> 86 <param name="normalise" value="true"/>
87 <output name="plot" value="AalborgWWTPs-boxplot-group.pdf" ftype="pdf"/> 87 <output name="plot" value="AalborgWWTPs-boxplot-group.pdf" ftype="pdf" compare="sim_size"/>
88 </test> 88 </test>
89 <test> 89 <test>
90 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> 90 <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/>
91 <param name="plot_type" value="point"/> 91 <param name="plot_type" value="point"/>
92 <param name="point_size" value="5"/> 92 <param name="point_size" value="5"/>
93 <param name="tax_aggregate" value="Order"/> 93 <param name="tax_aggregate" value="Order"/>
94 <param name="tax_add" value="Phylum"/> 94 <param name="tax_add" value="Phylum"/>
95 <output name="plot" value="AalborgWWTPs-boxplot-point.pdf" ftype="pdf"/> 95 <output name="plot" value="AalborgWWTPs-boxplot-point.pdf" ftype="pdf" compare="sim_size"/>
96 </test> 96 </test>
97 </tests> 97 </tests>
98 <help><![CDATA[ 98 <help><![CDATA[
99 What it does 99 What it does
100 ============ 100 ============