Mercurial > repos > iuc > ampvis2_core

comparison core.xml @ 2:7f712eb18230 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit 09b56ef3e09ad6c5923c88616fea5cbd77d87616
author iuc
date Mon, 18 Dec 2023 09:38:34 +0000
parents 48e343a308b0
children 943c2ae9594a
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1:de6156c8ef16 2:7f712eb18230
67 67
68 Core community plot to investigate how many of the most abundant OTU's comprise 68 Core community plot to investigate how many of the most abundant OTU's comprise
69 the "core" of groups of samples, their abundances etc. 69 the "core" of groups of samples, their abundances etc.
70 70
71 The Galaxy tool calls the `amp_core 71 The Galaxy tool calls the `amp_core
72 <https://madsalbertsen.github.io/ampvis2/reference/amp_core.html>`_ function 72 <https://kasperskytte.github.io/ampvis2/reference/amp_core.html>`_ function
73 of the ampvis2 package. 73 of the ampvis2 package.
74 74
75 This analysis only makes sense without aggregating OTU's to any taxonomic level, 75 This analysis only makes sense without aggregating OTU's to any taxonomic level,
76 or else it will be biased by taxonomy and only be done on OTU's that have been 76 or else it will be biased by taxonomy and only be done on OTU's that have been
77 classified, which is rarely all. 77 classified, which is rarely all.