Mercurial > repos > iuc > ampvis2_mergereplicates
changeset 9:c9143bcb2072 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit f32c3d9a92dca8a60504824fc7bcee290c30a211
| author | iuc |
|---|---|
| date | Tue, 01 Apr 2025 10:01:24 +0000 |
| parents | f34ea612eecf |
| children | |
| files | test-data/output_metadata.tsv test-data/output_otu_long.tsv test-data/output_otu_short.tsv test-data/output_otu_taxonomy_mapping.tsv test-data/output_phyloseq.rds |
| diffstat | 5 files changed, 671 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_metadata.tsv Tue Apr 01 10:01:24 2025 +0000 @@ -0,0 +1,68 @@ + SampleID Plant Date Year Period +16SAMP-747 16SAMP-747 Aalborg East 2010-02-04 2010 Winter +16S-AMP-1168 16S-AMP-1168 Aalborg West 2013-05-06 2013 Spring +16SAMP-4603 16SAMP-4603 Aalborg East 2014-08-19 2014 Summer +16S-AMP-1149 16S-AMP-1149 Aalborg East 2013-10-28 2013 Fall +16SAMP-537 16SAMP-537 Aalborg West 2010-08-19 2010 Summer +16S-AMP-1114 16S-AMP-1114 Aalborg West 2013-02-04 2013 Winter +16SAMP-3893 16SAMP-3893 Aalborg East 2014-02-06 2014 Winter +16SAMP-703 16SAMP-703 Aalborg East 2006-02-04 2006 Winter +16SAMP-638 16SAMP-638 Aalborg East 2012-10-28 2012 Fall +16SAMP-2611 16SAMP-2611 Aalborg East 2011-02-04 2011 Winter +16S-AMP-1100 16S-AMP-1100 Aalborg West 2012-08-19 2012 Summer +16SAMP-608 16SAMP-608 Aalborg East 2011-10-28 2011 Fall +16SAMP-636 16SAMP-636 Aalborg East 2012-05-06 2012 Spring +16SAMP-13288 16SAMP-13288 Aalborg West 2015-02-09 2015 Winter +16SAMP-719 16SAMP-719 Aalborg East 2007-08-19 2007 Summer +16S-AMP-1098 16S-AMP-1098 Aalborg West 2012-02-04 2012 Winter +16SAMP-536 16SAMP-536 Aalborg West 2010-05-06 2010 Spring +16S-AMP-1169 16S-AMP-1169 Aalborg West 2013-08-19 2013 Summer +16SAMP-635 16SAMP-635 Aalborg East 2012-02-04 2012 Winter +16SAMP-637 16SAMP-637 Aalborg East 2012-08-19 2012 Summer +16SAMP-717 16SAMP-717 Aalborg East 2007-02-04 2007 Winter +16S-AMP-1148 16S-AMP-1148 Aalborg East 2013-08-19 2013 Summer +16SAMP-735 16SAMP-735 Aalborg West 2008-05-06 2008 Spring +16SAMP-729 16SAMP-729 Aalborg East 2008-08-19 2008 Summer +16SAMP-738 16SAMP-738 Aalborg East 2009-02-04 2009 Winter +16SAMP-2613 16SAMP-2613 Aalborg West 2011-08-19 2011 Summer +16SAMP-10925 16SAMP-10925 Aalborg East 2015-10-27 2015 Fall +16SAMP-3913 16SAMP-3913 Aalborg East 2014-07-03 2014 Summer +16SAMP-716 16SAMP-716 Aalborg West 2006-02-04 2006 Winter +16SAMP-726 16SAMP-726 Aalborg West 2007-08-19 2007 Summer +16SAMP-728 16SAMP-728 Aalborg East 2008-05-06 2008 Spring +16SAMP-625 16SAMP-625 Aalborg West 2011-02-04 2011 Winter +16SAMP-736 16SAMP-736 Aalborg West 2008-08-19 2008 Summer +16SAMP-13281 16SAMP-13281 Aalborg East 2015-02-10 2015 Winter +16SAMP-626 16SAMP-626 Aalborg West 2011-10-28 2011 Fall +16SAMP-704 16SAMP-704 Aalborg East 2006-05-06 2006 Spring +16SAMP-2612 16SAMP-2612 Aalborg East 2011-08-19 2011 Summer +16SAMP-746 16SAMP-746 Aalborg West 2009-05-06 2009 Spring +16SAMP-522 16SAMP-522 Aalborg East 2010-10-28 2010 Fall +16SAMP-516 16SAMP-516 Aalborg West 2009-10-28 2009 Fall +16S-AMP-1170 16S-AMP-1170 Aalborg West 2013-10-28 2013 Fall +16S-AMP-1099 16S-AMP-1099 Aalborg West 2012-05-06 2012 Spring +16SAMP-10932 16SAMP-10932 Aalborg West 2015-10-27 2015 Fall +16SAMP-740 16SAMP-740 Aalborg East 2009-10-28 2009 Fall +16SAMP-739 16SAMP-739 Aalborg East 2009-05-06 2009 Spring +16SAMP-4597 16SAMP-4597 Aalborg West 2014-05-05 2014 Spring +16SAMP-535 16SAMP-535 Aalborg West 2010-02-04 2010 Winter +16SAMP-3941 16SAMP-3941 Aalborg West 2014-08-18 2014 Summer +16SAMP-3953 16SAMP-3953 Aalborg West 2014-11-12 2014 Fall +16SAMP-720 16SAMP-720 Aalborg East 2007-10-28 2007 Fall +16SAMP-705 16SAMP-705 Aalborg East 2006-08-19 2006 Summer +16SAMP-10907 16SAMP-10907 Aalborg East 2015-08-24 2015 Summer +16SAMP-538 16SAMP-538 Aalborg West 2010-10-28 2010 Fall +16SAMP-10911 16SAMP-10911 Aalborg West 2015-08-24 2015 Summer +16SAMP-737 16SAMP-737 Aalborg West 2008-10-28 2008 Fall +16SAMP-4591 16SAMP-4591 Aalborg West 2014-02-04 2014 Winter +16SAMP-745 16SAMP-745 Aalborg West 2009-02-04 2009 Winter +16SAMP-706 16SAMP-706 Aalborg East 2006-10-28 2006 Fall +16SAMP-3946 16SAMP-3946 Aalborg East 2014-11-13 2014 Fall +16S-AMP-1101 16S-AMP-1101 Aalborg West 2012-10-28 2012 Fall +16SAMP-10896 16SAMP-10896 Aalborg West 2015-05-04 2015 Spring +16SAMP-10891 16SAMP-10891 Aalborg East 2015-05-04 2015 Spring +16SAMP-748 16SAMP-748 Aalborg East 2010-05-06 2010 Spring +16SAMP-725 16SAMP-725 Aalborg West 2007-02-04 2007 Winter +16SAMP-730 16SAMP-730 Aalborg East 2008-10-28 2008 Fall +16S-AMP-1107 16S-AMP-1107 Aalborg East 2013-05-06 2013 Spring +16SAMP-727 16SAMP-727 Aalborg East 2008-02-04 2008 Winter
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_otu_long.tsv Tue Apr 01 10:01:24 2025 +0000 @@ -0,0 +1,201 @@ +OTU 16SAMP-747 16S-AMP-1168 16SAMP-4603 16S-AMP-1149 16SAMP-537 16S-AMP-1114 16SAMP-3893 16SAMP-703 16SAMP-638 16SAMP-2611 16S-AMP-1100 16SAMP-608 16SAMP-636 16SAMP-13288 16SAMP-719 16S-AMP-1098 16SAMP-536 16S-AMP-1169 16SAMP-635 16SAMP-637 16SAMP-717 16S-AMP-1148 16SAMP-735 16SAMP-729 16SAMP-738 16SAMP-2613 16SAMP-10925 16SAMP-3913 16SAMP-716 16SAMP-726 16SAMP-728 16SAMP-625 16SAMP-736 16SAMP-13281 16SAMP-626 16SAMP-704 16SAMP-2612 16SAMP-746 16SAMP-522 16SAMP-516 16S-AMP-1170 16S-AMP-1099 16SAMP-10932 16SAMP-740 16SAMP-739 16SAMP-4597 16SAMP-535 16SAMP-3941 16SAMP-3953 16SAMP-720 16SAMP-705 16SAMP-10907 16SAMP-538 16SAMP-10911 16SAMP-737 16SAMP-4591 16SAMP-745 16SAMP-706 16SAMP-3946 16S-AMP-1101 16SAMP-10896 16SAMP-10891 16SAMP-748 16SAMP-725 16SAMP-730 16S-AMP-1107 16SAMP-727 Kingdom Phylum Class Order Family Genus Species +OTU_95 1 132 382 37 2 29 317 2 241 5 15 379 422 111 1 47 0 101 603 151 2 350 0 0 0 7 527 576 0 2 0 5 0 324 182 5 31 0 1 0 54 22 108 0 1 102 0 203 289 3 33 274 0 291 0 94 0 2 711 165 23 578 27 0 0 88 0 k__Bacteria p__Proteobacteria c__Deltaproteobacteria o__Bdellovibrionales f__Bdellovibrionaceae g__OM27 clade s__ +OTU_173 124 32 13 24 14 45 15 86 50 608 31 80 280 72 47 44 1 17 144 52 48 86 2 46 65 36 3 62 2 1 128 40 2 2 22 88 61 9 56 2 25 35 19 100 258 36 0 14 20 12 32 1 6 36 2 35 13 40 1 27 27 17 275 2 30 142 17 k__Bacteria p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_318 77 38 15 95 14 52 157 43 37 131 2 33 138 49 30 24 15 5 97 26 78 43 16 11 110 11 17 179 57 1 20 28 0 176 2 123 34 45 43 3 19 26 9 40 107 16 23 4 6 22 20 8 6 11 7 32 24 24 17 26 24 227 215 61 42 237 66 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Simplicispira s__ +OTU_4382 16 90 95 57 39 49 23 12 32 51 57 61 83 158 20 65 10 93 69 32 34 48 8 15 21 68 68 39 33 15 37 18 6 12 87 19 51 27 24 22 75 44 113 55 11 107 20 84 55 18 34 36 21 159 18 64 16 27 35 90 67 28 41 23 21 32 9 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Rhodocyclales f__Rhodocyclaceae g__Sulfuritalea s__ +OTU_233 39 23 23 65 12 37 27 35 57 27 29 82 49 19 46 48 12 18 34 115 29 29 32 60 20 39 86 5 8 23 32 24 31 9 32 17 82 34 15 39 33 21 21 48 10 11 9 14 5 48 17 41 22 19 62 12 29 51 28 43 19 34 26 14 34 40 54 k__Bacteria p__Actinobacteria c__Thermoleophilia o__Solirubrobacterales f__480-2 g__K2-78 s__ +OTU_81 37 31 74 117 16 24 32 6 18 27 8 68 76 98 19 25 11 9 65 28 38 49 7 13 14 20 71 24 25 12 26 8 4 192 38 12 20 19 12 11 4 30 13 34 17 17 13 9 17 20 54 45 11 34 25 13 14 76 56 15 23 116 27 39 12 47 7 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__CYCU-0281 s__ +OTU_161 21 12 12 16 30 21 21 28 9 32 20 16 16 5 29 16 33 13 9 12 22 7 58 39 26 35 13 19 50 82 49 25 45 7 15 22 22 42 15 33 13 22 8 32 24 15 32 12 11 32 34 5 26 11 45 15 39 34 22 24 7 18 58 46 11 20 25 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae g__Hyphomicrobium s__ +OTU_289 0 104 58 25 2 10 28 0 39 3 18 32 37 106 6 40 2 28 58 37 8 52 2 1 0 13 86 39 2 0 4 6 0 101 47 10 20 5 5 1 37 15 55 2 0 12 0 41 45 4 3 59 0 76 0 74 1 24 19 35 44 39 6 3 0 8 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Chitinophagaceae g__uncultured s__ +OTU_6255 48 3 14 29 6 13 9 15 25 22 3 27 27 9 14 8 3 8 20 21 6 22 9 36 40 13 16 9 2 8 20 3 8 7 4 8 31 13 33 7 12 7 4 50 17 5 5 2 1 32 20 10 7 3 6 9 11 18 11 6 5 28 48 6 36 18 40 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Proteiniclasticum s__ +OTU_541 0 14 18 4 4 18 15 3 17 12 18 22 16 66 23 9 7 24 14 24 7 3 6 3 2 17 67 17 6 10 5 12 1 22 19 5 11 8 5 13 9 15 36 9 5 17 7 11 12 2 6 42 4 27 5 13 4 14 11 19 45 45 3 17 1 7 0 k__Bacteria p__Acidobacteria c__Acidobacteria o__Subgroup 6 f__ g__ s__ +OTU_448 1 3 103 13 0 3 15 1 0 14 4 1 0 34 34 2 0 4 1 0 39 3 0 7 2 26 81 20 0 5 2 0 0 11 2 0 68 1 0 0 8 2 10 28 3 2 0 6 13 16 7 96 0 13 2 8 1 36 15 6 15 46 9 6 1 11 1 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__uncultured s__ +OTU_9548 4 14 7 13 9 26 9 7 17 9 18 19 19 10 4 21 9 10 14 20 18 5 10 22 12 21 13 8 5 13 6 8 18 3 12 5 25 15 24 15 8 20 11 24 11 9 12 7 1 12 15 7 6 7 23 4 6 12 13 27 12 14 8 4 14 12 11 k__Bacteria p__Actinobacteria c__Acidimicrobiia o__Acidimicrobiales f__Acidimicrobiaceae g__CL500-29 marine group s__ +OTU_10522 5 17 4 0 25 29 3 17 2 2 50 3 2 8 10 21 49 16 2 9 8 1 17 9 10 4 1 0 21 13 0 35 14 0 15 2 5 24 2 34 22 34 4 7 7 13 42 2 5 4 5 0 13 8 20 10 14 8 1 28 7 1 1 8 7 9 14 k__Bacteria p__Actinobacteria c__Actinobacteria o__Micrococcales f__Intrasporangiaceae g__Tetrasphaera s__ +OTU_4669 8 6 9 4 13 6 9 5 11 7 7 10 2 0 20 18 2 6 2 10 4 6 2 20 4 13 6 1 5 13 7 7 10 0 14 5 15 3 7 5 4 10 4 17 4 4 16 2 3 17 6 1 9 5 13 6 9 23 5 6 1 4 6 1 13 6 20 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Nordellaceae g__MNG7 s__ +OTU_288 5 3 11 7 7 6 2 7 2 1 4 1 1 3 23 4 2 3 5 12 3 1 23 11 4 7 5 3 5 13 8 1 26 3 8 2 14 11 5 14 2 6 4 7 3 2 9 4 7 17 8 6 7 7 15 2 19 26 8 5 3 1 8 4 2 7 7 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae +OTU_556 17 9 2 6 11 8 9 3 7 4 2 12 12 12 3 11 3 3 8 3 4 2 1 7 9 6 8 5 6 14 3 3 5 4 3 4 8 15 3 10 11 5 3 12 7 3 10 1 1 11 2 2 10 2 9 8 17 5 5 14 4 6 15 15 11 6 4 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Lachnospiraceae g__Fusicatenibacter s__ +OTU_364 3 7 2 0 9 8 0 0 2 2 5 3 2 14 3 10 7 0 1 1 3 1 14 11 8 10 2 0 5 12 6 6 16 2 8 1 3 13 0 17 8 5 13 1 1 2 18 2 5 6 3 5 1 39 20 2 5 2 2 13 8 3 1 6 4 3 5 k__Bacteria p__Chloroflexi c__Thermomicrobia o__JG30-KF-CM45 f__ g__ s__ +OTU_284 3 4 5 4 2 9 0 1 3 6 1 9 2 27 8 5 0 15 2 4 4 2 1 2 3 1 1 0 0 2 4 3 0 2 5 0 5 0 2 0 7 4 23 6 1 5 0 10 17 4 1 2 5 22 0 8 2 2 3 6 11 0 3 7 2 0 3 k__Bacteria p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_1151 1 8 4 0 17 4 1 0 2 1 12 2 1 7 2 9 4 21 0 5 0 0 2 0 1 11 11 0 3 1 2 0 1 2 13 0 1 5 1 2 6 10 4 3 0 5 2 5 6 6 2 4 3 29 4 10 2 2 0 19 4 1 0 2 0 3 0 k__Bacteria p__Acidobacteria c__Holophagae o__Holophagales f__Holophagaceae +OTU_684 0 8 26 15 0 3 7 0 5 1 5 3 16 12 1 1 0 12 13 5 1 23 0 0 0 0 4 5 1 0 0 0 0 6 1 3 7 0 0 0 12 1 12 0 0 9 0 7 0 3 3 2 0 6 0 8 1 5 3 3 0 17 1 0 0 7 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__env.OPS 17 g__ s__ +OTU_2343 8 2 4 2 4 10 2 4 3 1 4 2 4 5 5 3 1 4 2 1 7 6 3 1 8 4 2 2 6 6 3 4 4 8 3 3 2 9 4 1 3 9 3 7 2 3 3 1 0 4 0 0 4 1 6 7 9 4 2 10 2 3 3 9 3 1 3 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminococcus 2 s__ +OTU_10641 3 5 2 3 3 5 3 2 13 2 1 10 1 0 8 4 1 1 7 3 3 1 6 13 5 6 7 0 7 1 3 0 4 1 3 1 12 4 9 5 1 2 0 10 0 4 4 0 0 6 3 0 0 1 6 4 2 5 1 5 2 2 2 6 9 4 7 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae g__Hyphomicrobium s__ +OTU_522 3 0 3 0 9 5 0 0 0 1 13 2 0 5 0 7 2 3 2 0 1 0 21 5 3 5 1 0 5 26 0 5 11 0 5 0 0 2 2 4 4 2 6 3 0 2 2 6 4 1 0 0 3 1 26 1 2 0 1 0 1 3 4 14 3 0 2 k__Bacteria p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__Candidatus Defluviifilum s__ +OTU_1066 2 5 0 2 7 6 0 2 2 3 3 2 0 2 0 3 1 5 0 0 1 1 7 5 1 11 0 1 4 7 7 3 19 0 0 2 7 11 2 0 0 9 4 6 0 1 5 4 3 2 2 0 4 3 12 1 3 6 0 0 0 0 4 19 1 0 4 k__Bacteria p__Planctomycetes c__Planctomycetacia o__Planctomycetales f__Planctomycetaceae g__Pirellula s__ +OTU_462 6 0 0 0 0 0 0 9 1 0 0 8 0 0 4 0 0 0 3 0 1 0 0 9 7 0 16 1 0 0 68 0 0 0 0 2 3 0 0 0 0 0 0 3 5 0 0 0 0 7 6 4 0 0 0 0 0 5 1 0 0 11 7 0 7 0 13 k__Bacteria p__Deinococcus-Thermus c__Deinococci o__Thermales f__Thermaceae g__Meiothermus s__ +OTU_1521 3 1 0 3 0 2 12 6 2 8 0 4 4 2 1 0 0 0 14 1 10 4 0 2 3 0 0 0 1 0 1 0 0 63 2 9 3 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 2 1 4 8 1 0 6 10 2 0 5 2 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium s__ +OTU_1634 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 10 75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 92 0 0 1 k__Bacteria p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae +OTU_656 1 0 0 0 1 2 1 3 0 1 0 0 0 0 13 0 3 0 0 3 3 0 1 19 1 4 0 0 3 2 16 1 1 0 1 0 2 1 7 2 3 0 0 9 2 1 2 0 0 12 4 0 1 1 2 1 3 17 0 1 0 0 0 0 5 1 16 k__Bacteria p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_1707 4 3 4 3 3 0 8 0 2 3 1 3 0 1 3 2 0 4 4 5 9 2 0 2 1 5 5 2 1 0 2 1 0 2 1 4 7 1 0 0 2 0 0 2 0 2 0 0 6 5 5 4 3 1 1 4 0 1 6 1 0 7 1 0 0 1 1 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Ramlibacter s__ +OTU_2148 0 0 15 15 0 0 0 0 12 0 0 10 4 0 0 0 0 0 8 0 1 13 0 0 1 0 1 0 0 0 0 0 0 0 0 0 17 1 0 0 0 0 0 4 0 0 0 0 0 0 0 9 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Rhodocyclales f__Rhodocyclaceae g__Uliginosibacterium s__ +OTU_11832 1 0 3 2 0 1 1 0 5 1 6 9 1 0 0 2 3 3 7 3 4 2 1 1 7 0 1 2 0 1 0 6 0 0 7 1 1 3 4 1 1 3 1 3 2 3 4 0 0 2 0 0 0 0 3 2 1 0 4 2 0 1 2 1 10 2 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Nitrosomonadales f__Nitrosomonadaceae g__Nitrosomonas s__ +OTU_8315 1 0 3 2 1 1 0 2 1 2 1 10 1 0 3 0 1 1 6 1 3 3 1 6 3 0 10 0 0 0 4 3 0 4 0 2 5 0 1 0 0 1 0 0 1 1 0 0 0 2 2 4 3 1 0 0 0 2 3 1 0 5 3 1 19 1 1 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Nitrosomonadales f__Nitrosomonadaceae g__Nitrosomonas s__ +OTU_4721 0 1 5 1 5 0 0 0 1 2 2 1 1 3 2 0 0 3 0 0 0 8 0 4 0 9 2 1 1 10 1 0 0 0 0 1 10 1 0 1 3 0 3 6 0 1 0 7 4 0 1 0 0 2 6 2 1 4 1 7 1 0 0 0 5 0 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Acidovorax s__ +OTU_1998 1 1 1 0 6 0 4 2 1 2 0 5 1 0 11 1 0 0 3 3 3 1 1 4 6 2 2 4 0 2 2 5 2 1 0 0 1 1 2 0 0 2 0 2 1 0 2 0 0 4 4 6 1 1 0 0 1 1 2 0 0 3 3 0 1 3 7 k__Bacteria p__Actinobacteria c__Actinobacteria o__Micrococcales f__Intrasporangiaceae g__Fodinibacter s__ +OTU_1479 0 4 0 0 13 8 0 0 0 0 8 0 0 2 0 6 1 2 0 0 0 0 0 0 0 4 0 0 0 0 0 5 1 0 9 0 0 0 2 2 1 1 5 0 0 0 3 0 4 0 0 0 8 13 5 1 2 0 0 7 1 0 0 0 0 0 0 k__Bacteria p__Acidobacteria c__Holophagae o__Subgroup 10 f__ABS-19 g__B1-K1A-105 s__ +OTU_1875 0 0 4 4 0 0 1 0 0 1 0 3 5 8 1 0 0 0 11 1 6 8 0 0 1 0 1 2 0 0 0 1 0 2 6 1 2 2 2 0 2 2 1 1 0 4 0 0 2 1 3 1 0 4 0 2 0 3 2 1 0 7 4 0 0 0 1 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__NS9 marine group g__ s__ +OTU_1794 0 2 0 2 0 1 3 3 3 2 0 1 1 1 0 0 0 0 2 1 1 3 0 1 0 3 0 5 2 0 1 1 0 3 1 3 0 0 1 0 2 2 1 3 2 0 1 0 0 1 3 1 1 1 0 0 0 0 0 0 2 7 1 0 0 5 32 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Peptostreptococcaceae g__Acetoanaerobium s__ +OTU_1306 2 2 0 0 9 0 0 3 2 0 13 0 0 2 3 2 0 7 0 0 0 0 1 1 0 11 0 0 0 1 0 1 4 0 7 0 0 1 0 0 3 2 2 1 0 0 0 0 1 2 0 0 1 0 3 1 1 12 0 3 0 0 0 1 1 0 0 k__Bacteria p__WCHB1-60 c__ o__ f__ g__ s__ +OTU_4039 2 0 1 0 0 0 1 0 4 6 1 4 4 0 0 0 0 1 3 3 0 2 4 0 0 1 2 0 0 15 0 0 10 1 0 1 2 1 2 0 0 0 1 4 0 1 0 1 1 0 0 0 0 0 5 0 2 2 0 0 1 2 1 2 0 0 0 k__Bacteria p__Proteobacteria c__Deltaproteobacteria o__Desulfobacterales f__Desulfobulbaceae g__Desulfobulbus s__ +OTU_3097 0 0 1 3 2 2 0 2 1 1 0 2 0 0 3 1 0 1 0 2 2 7 0 1 2 0 4 4 1 1 4 0 1 0 1 0 3 0 1 0 3 4 2 3 0 0 1 2 5 3 0 0 0 1 1 2 1 1 2 1 0 1 1 0 2 0 4 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Proteiniclasticum s__ +OTU_2415 1 0 1 3 0 1 1 0 0 0 1 1 0 9 0 1 0 6 0 0 0 2 1 1 1 2 3 1 0 0 0 0 1 1 0 0 0 0 0 0 2 0 8 0 0 0 0 6 3 0 0 6 0 13 0 3 0 0 1 7 0 0 0 0 0 2 0 k__Bacteria p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__Sandaracinaceae g__Sandaracinus s__ +OTU_190 1 2 0 0 3 2 0 1 0 0 1 0 8 1 0 3 2 1 1 6 1 0 1 1 0 1 0 0 0 0 0 6 0 1 2 2 0 0 1 4 2 3 0 0 1 0 3 1 3 2 1 0 6 0 0 1 0 0 2 1 1 3 3 0 0 0 1 k__Bacteria p__Actinobacteria c__Actinobacteria o__Propionibacteriales 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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_otu_taxonomy_mapping.tsv Tue Apr 01 10:01:24 2025 +0000 @@ -0,0 +1,201 @@ +OTU Phylum Class Order Family Genus Species +OTU_8735 p__Firmicutes c__Clostridia o__Clostridiales f__Lachnospiraceae g__Acetitomaculum s__ +OTU_13382 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminococcaceae UCG-005 s__ +OTU_5516 p__Bacteroidetes c__Cytophagia o__Cytophagales f__Cytophagaceae g__Dyadobacter s__ +OTU_8315 p__Proteobacteria c__Betaproteobacteria o__Nitrosomonadales f__Nitrosomonadaceae g__Nitrosomonas s__ +OTU_10522 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Intrasporangiaceae g__Tetrasphaera s__ +OTU_11040 p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Xanthomonadaceae +OTU_7263 p__Proteobacteria c__Deltaproteobacteria o__Desulfobacterales f__Desulfobacteraceae g__Desulforegula s__ +OTU_13379 p__Firmicutes c__Bacilli o__Bacillales f__Planococcaceae g__Rummeliibacillus s__ +OTU_1418 p__Hydrogenedentes c__ o__ f__ g__ s__ +OTU_556 p__Firmicutes c__Clostridia o__Clostridiales f__Lachnospiraceae g__Fusicatenibacter s__ +OTU_6869 p__Parcubacteria c__ o__ f__ g__ s__ +OTU_10171 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminiclostridium 1 s__ +OTU_2830 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Dermatophilaceae g__uncultured s__ +OTU_4232 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__AKYH767 g__ s__ +OTU_12831 p__Planctomycetes c__Planctomycetacia o__Planctomycetales f__Planctomycetaceae +OTU_613 p__Acidobacteria c__Holophagae o__Holophagales f__Holophagaceae +OTU_3625 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae g__Brooklawnia s__ +OTU_3605 p__Chloroflexi c__Chloroflexia o__Chloroflexales f__Roseiflexaceae g__ s__ +OTU_11148 p__Actinobacteria c__Actinobacteria o__PeM15 f__PeM15 g__ s__ +OTU_656 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_4382 p__Proteobacteria c__Betaproteobacteria o__Rhodocyclales f__Rhodocyclaceae g__Sulfuritalea s__ +OTU_3834 +OTU_13127 p__Firmicutes c__Clostridia o__Clostridiales +OTU_4528 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales +OTU_4485 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__Blfdi19 g__ s__ +OTU_12265 p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus s__ +OTU_11820 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae +OTU_4093 p__Chloroflexi c__Anaerolineae o__Anaerolineales f__Anaerolineaceae g__uncultured s__ +OTU_8360 p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium s__ +OTU_15123 p__Firmicutes c__Negativicutes o__Selenomonadales f__Veillonellaceae +OTU_11928 p__Proteobacteria c__Deltaproteobacteria o__Desulfobacterales f__Desulfobacteraceae +OTU_11334 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Acetobacteraceae g__Acidicaldus s__ +OTU_4511 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__mle1-27 g__ s__ +OTU_3265 p__Chloroflexi c__Anaerolineae o__Anaerolineales f__Anaerolineaceae g__uncultured s__ +OTU_2991 p__Actinobacteria +OTU_522 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__Candidatus Defluviifilum s__ +OTU_11832 p__Proteobacteria c__Betaproteobacteria o__Nitrosomonadales f__Nitrosomonadaceae g__Nitrosomonas s__ +OTU_6358 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminococcaceae UCG-010 s__ +OTU_3611 p__Saccharibacteria c__Unknown Class o__Unknown Order f__SBR2060 g__SBR2113 s__ +OTU_1408 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales +OTU_7471 p__Bacteroidetes +OTU_14124 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Subdoligranulum s__ +OTU_13012 p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus s__ +OTU_8113 p__Candidate division SR1 c__ o__ f__ g__ s__ +OTU_11414 p__Cyanobacteria c__Cyanobacteria o__SubsectionIII f__FamilyI +OTU_2232 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Microbacteriaceae +OTU_13504 p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus s__ +OTU_173 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_11006 p__Firmicutes c__Clostridia o__Clostridiales f__Lachnospiraceae +OTU_9035 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__uncultured s__ +OTU_8165 p__Firmicutes c__Clostridia o__Clostridiales +OTU_1707 p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Ramlibacter s__ +OTU_4805 p__Proteobacteria c__Alphaproteobacteria o__Rickettsiales f__TK34 g__ s__ +OTU_7801 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Bradyrhizobiaceae g__Bosea s__ +OTU_6106 p__Hydrogenedentes c__ o__ f__ g__ s__ +OTU_9681 p__Synergistetes c__Synergistia o__Synergistales f__Synergistaceae g__uncultured s__ +OTU_4039 p__Proteobacteria c__Deltaproteobacteria o__Desulfobacterales f__Desulfobulbaceae g__Desulfobulbus s__ +OTU_4338 p__Actinobacteria c__Thermoleophilia o__Gaiellales f__BVA77 g__ s__ +OTU_1634 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae +OTU_684 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__env.OPS 17 g__ s__ +OTU_496 p__Actinobacteria c__Acidimicrobiia o__Acidimicrobiales +OTU_3941 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Nocardioidaceae g__Nocardioides s__ +OTU_4193 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__DUNssu044 g__ s__ +OTU_9455 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__uncultured s__ +OTU_7842 p__Firmicutes c__Clostridia o__Clostridiales f__Family XII g__Fusibacter s__ +OTU_13494 p__Planctomycetes c__Phycisphaerae o__Phycisphaerales f__Phycisphaeraceae g__uncultured s__ +OTU_1285 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Chitinophagaceae g__uncultured s__ +OTU_132 p__Chloroflexi c__WCHB1-50 o__WCHB1-50 f__WCHB1-50 g__SM1F10 s__ +OTU_10641 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae g__Hyphomicrobium s__ +OTU_236 p__Proteobacteria c__Betaproteobacteria o__Rhodocyclales f__Rhodocyclaceae +OTU_462 p__Deinococcus-Thermus c__Deinococci o__Thermales f__Thermaceae g__Meiothermus s__ +OTU_161 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae g__Hyphomicrobium s__ +OTU_13660 p__Firmicutes c__Bacilli o__Lactobacillales f__Carnobacteriaceae g__Trichococcus s__ +OTU_9412 p__Chlorobi c__Ignavibacteria o__Ignavibacteriales f__PHOS-HE36 g__oca15 s__ +OTU_7504 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales +OTU_318 p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Simplicispira s__ +OTU_7070 p__Firmicutes c__Clostridia o__Clostridiales f__Family XIII +OTU_288 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Hyphomicrobiaceae +OTU_2415 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__Sandaracinaceae g__Sandaracinus s__ +OTU_95 p__Proteobacteria c__Deltaproteobacteria o__Bdellovibrionales f__Bdellovibrionaceae g__OM27 clade s__ +OTU_3982 p__Proteobacteria c__Alphaproteobacteria o__Rickettsiales f__Mitochondria g__ s__ +OTU_4278 p__Verrucomicrobia c__Verrucomicrobiae o__Verrucomicrobiales f__Verrucomicrobiaceae g__uncultured s__ +OTU_2887 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae +OTU_5684 p__Chloroflexi c__Anaerolineae o__Anaerolineales f__Anaerolineaceae g__uncultured s__ +OTU_4220 +OTU_7051 +OTU_11398 p__Actinobacteria c__Coriobacteriia o__Coriobacteriales f__Coriobacteriaceae g__Collinsella s__ +OTU_4669 p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Nordellaceae g__MNG7 s__ +OTU_4697 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Acetobacteraceae g__Roseomonas s__ +OTU_6765 p__Chloroflexi c__Anaerolineae o__Anaerolineales f__Anaerolineaceae +OTU_1066 p__Planctomycetes c__Planctomycetacia o__Planctomycetales f__Planctomycetaceae g__Pirellula s__ +OTU_5907 p__Planctomycetes c__Planctomycetacia o__Planctomycetales f__Planctomycetaceae g__uncultured s__ +OTU_4933 p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Clostridium sensu stricto 1 s__ +OTU_8885 p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus s__ +OTU_4226 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__Candidatus Defluviifilum s__ +OTU_1821 p__Proteobacteria c__TA18 o__ f__ g__ s__ +OTU_1794 p__Firmicutes c__Clostridia o__Clostridiales f__Peptostreptococcaceae g__Acetoanaerobium s__ +OTU_3925 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__env.OPS 17 g__ s__ +OTU_3353 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Acetobacteraceae +OTU_7163 p__GOUTA4 c__ o__ f__ g__ s__ +OTU_541 p__Acidobacteria c__Acidobacteria o__Subgroup 6 f__ g__ s__ +OTU_1521 p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium s__ +OTU_14421 p__Proteobacteria c__Alphaproteobacteria o__Rickettsiales f__Holosporaceae g__uncultured s__ +OTU_2972 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__uncultured s__ +OTU_8291 p__Nitrospirae c__Nitrospira o__Nitrospirales f__Nitrospiraceae g__Nitrospira s__sublineage I +OTU_289 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Chitinophagaceae g__uncultured s__ +OTU_1306 p__WCHB1-60 c__ o__ f__ g__ s__ +OTU_4839 p__Planctomycetes c__Phycisphaerae o__WD2101 soil group f__ g__ s__ +OTU_11689 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae g__Propioniciclava s__ +OTU_12665 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Parabacteroides s__ +OTU_2085 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae +OTU_448 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__uncultured s__ +OTU_6935 p__Actinobacteria c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomyces s__ +OTU_190 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Nocardioidaceae g__Aeromicrobium s__ +OTU_4458 p__Firmicutes c__Clostridia o__Clostridiales f__Family XI g__uncultured s__ +OTU_927 +OTU_5113 p__Chlorobi c__Chlorobia o__Chlorobiales f__Chlorobiaceae g__ s__ +OTU_1875 p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__NS9 marine group g__ s__ +OTU_9228 p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Clostridium sensu stricto 6 s__ +OTU_1845 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Rhodospirillales Incertae Sedis g__Reyranella s__ +OTU_6255 p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Proteiniclasticum s__ +OTU_1479 p__Acidobacteria c__Holophagae o__Subgroup 10 f__ABS-19 g__B1-K1A-105 s__ +OTU_14146 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotellaceae UCG-004 s__ +OTU_6507 p__Elusimicrobia c__Elusimicrobia o__Lineage IIb f__ g__ s__ +OTU_7542 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__Haliangiaceae g__Haliangium s__ +OTU_13718 p__Firmicutes c__Bacilli o__Bacillales f__Bacillaceae g__Ureibacillus s__ +OTU_4593 p__Proteobacteria c__Deltaproteobacteria o__Oligoflexales f__ g__ s__ +OTU_2343 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminococcus 2 s__ +OTU_8708 +OTU_2677 p__SM2F11 c__ o__ f__ g__ s__ +OTU_9665 p__Actinobacteria c__Acidimicrobiia o__Acidimicrobiales +OTU_81 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__CYCU-0281 s__ +OTU_6422 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Chitinophagaceae g__Parafilimonas s__ +OTU_1612 p__Proteobacteria c__TA18 o__ f__ g__ s__ +OTU_3216 p__Actinobacteria c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomyces s__ +OTU_9248 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae g__Aestuariimicrobium s__ +OTU_5187 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_7882 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminiclostridium 1 s__ +OTU_1543 p__Saccharibacteria c__ o__ f__ g__ s__ +OTU_11775 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Microbacteriaceae g__Diaminobutyricimonas s__ +OTU_233 p__Actinobacteria c__Thermoleophilia o__Solirubrobacterales f__480-2 g__K2-78 s__ +OTU_4015 p__Firmicutes c__Erysipelotrichia o__Erysipelotrichales f__Erysipelotrichaceae g__Erysipelatoclostridium s__ +OTU_8260 p__TM6 c__ o__ f__ g__ s__ +OTU_9548 p__Actinobacteria c__Acidimicrobiia o__Acidimicrobiales f__Acidimicrobiaceae g__CL500-29 marine group s__ +OTU_5643 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__ +OTU_1586 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae g__Tessaracoccus s__ +OTU_3782 p__Actinobacteria c__Actinobacteria o__Corynebacteriales f__Nocardiaceae g__Gordonia s__ +OTU_2934 p__Actinobacteria c__Coriobacteriia o__Coriobacteriales f__Coriobacteriaceae g__Senegalimassilia s__ +OTU_14570 p__Armatimonadetes c__ o__ f__ g__ s__ +OTU_11781 p__Actinobacteria c__Coriobacteriia o__Coriobacteriales f__Coriobacteriaceae g__Atopobium s__ +OTU_3700 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Proteiniphilum s__ +OTU_6318 +OTU_2148 p__Proteobacteria c__Betaproteobacteria o__Rhodocyclales f__Rhodocyclaceae g__Uliginosibacterium s__ +OTU_2244 p__Chloroflexi c__WCHB1-50 o__WCHB1-50 f__WCHB1-50 g__WCHB1-50 s__ +OTU_7867 p__Bacteroidetes c__BSV13 o__ f__ g__ s__ +OTU_14248 p__Actinobacteria c__Thermoleophilia o__Solirubrobacterales f__480-2 g__K2-78 s__ +OTU_12704 p__Proteobacteria c__Deltaproteobacteria o__Myxococcales f__bacteriap25 g__ s__ +OTU_364 p__Chloroflexi c__Thermomicrobia o__JG30-KF-CM45 f__ g__ s__ +OTU_8245 p__Firmicutes c__Clostridia o__Clostridiales f__Christensenellaceae g__Christensenellaceae R-7 group s__ +OTU_10847 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae +OTU_1151 p__Acidobacteria c__Holophagae o__Holophagales f__Holophagaceae +OTU_1998 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Intrasporangiaceae g__Fodinibacter s__ +OTU_10321 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Rhodospirillaceae g__Defluviicoccus s__cluster I +OTU_4721 p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Comamonadaceae g__Acidovorax s__ +OTU_6237 p__Verrucomicrobia c__OPB35 soil group o__ f__ g__ s__ +OTU_1972 p__Saccharibacteria c__Unknown Class o__FW73 +OTU_11364 p__Elusimicrobia c__Elusimicrobia o__Lineage IIb f__ g__ s__ +OTU_1816 p__Actinobacteria c__Actinobacteria o__Micrococcales f__Beutenbergiaceae g__Salana s__ +OTU_14842 p__Actinobacteria c__Actinobacteria o__Propionibacteriales f__Propionibacteriaceae g__Propionimicrobium s__ +OTU_6533 p__Fusobacteria c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__uncultured s__ +OTU_8887 p__Tenericutes c__Mollicutes o__Mollicutes RF9 f__ g__ s__ +OTU_12690 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__Litorilinea s__ +OTU_3097 p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae 1 g__Proteiniclasticum s__ +OTU_3257 p__Firmicutes c__Erysipelotrichia o__Erysipelotrichales f__Erysipelotrichaceae g__Faecalitalea s__ +OTU_3161 p__Proteobacteria c__Alphaproteobacteria o__Rhodospirillales f__Acetobacteraceae g__uncultured s__ +OTU_11903 p__Actinobacteria c__Thermoleophilia o__Solirubrobacterales f__480-2 g__ s__ +OTU_7508 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__Ruminiclostridium 5 s__ +OTU_10969 p__Proteobacteria c__Deltaproteobacteria o__Oligoflexales f__ g__ s__ +OTU_1801 p__Proteobacteria c__Deltaproteobacteria o__Oligoflexales f__Oligoflexaceae g__ s__ +OTU_3488 p__Proteobacteria c__Betaproteobacteria o__Neisseriales f__Neisseriaceae g__Rivicola s__ +OTU_933 p__Proteobacteria c__Deltaproteobacteria o__GR-WP33-30 f__ g__ s__ +OTU_3824 p__Lentisphaerae c__PBS-III-20 o__ f__ g__ s__ +OTU_777 p__Proteobacteria c__Alphaproteobacteria o__Rickettsiales f__AKIW1012 g__ s__ +OTU_3169 p__TM6 c__ o__ f__ g__ s__ +OTU_12385 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae g__[Eubacterium] coprostanoligenes group s__ +OTU_1496 p__Armatimonadetes c__ o__ f__ g__ s__ +OTU_11294 p__Actinobacteria c__Acidimicrobiia o__Acidimicrobiales f__Microthricaceae g__ s__ +OTU_1968 p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Saprospiraceae g__Lewinella s__ +OTU_8832 p__Proteobacteria c__Alphaproteobacteria o__Rickettsiales +OTU_8652 p__Proteobacteria c__Deltaproteobacteria +OTU_13621 p__Chlorobi c__Chlorobia o__Chlorobiales f__OPB56 g__ s__ +OTU_3043 p__Microgenomates c__ o__ f__ g__ s__ +OTU_10760 p__Firmicutes c__Clostridia o__Clostridiales f__Ruminococcaceae +OTU_14173 p__Bacteroidetes c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__ +OTU_10746 p__Cyanobacteria c__Chloroplast o__ f__ g__ s__ +OTU_284 p__Chloroflexi c__Caldilineae o__Caldilineales f__Caldilineaceae g__uncultured s__ +OTU_5049 p__Saccharibacteria c__ o__ f__ g__ s__ +OTU_2397 p__Chloroflexi c__Anaerolineae o__Anaerolineales f__Anaerolineaceae g__uncultured s__ +OTU_2913 p__Planctomycetes c__Planctomycetacia o__Planctomycetales f__Planctomycetaceae g__uncultured s__ +OTU_9512 p__Bacteroidetes