# HG changeset patch # User iuc # Date 1655882552 0 # Node ID 0cb889db0910d4191fb5502e9ea4dad97d320dc4 # Parent 707023fa62fe090d20ce690c4259458809fba667 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 7decaee045e15bd71deb3bc46b81aa39caf1ed31 diff -r 707023fa62fe -r 0cb889db0910 export.xml --- a/export.xml Sat May 07 19:56:46 2022 +0000 +++ b/export.xml Wed Jun 22 07:22:32 2022 +0000 @@ -1,4 +1,4 @@ - + Interconvert AnnData and Loom formats macros.xml diff -r 707023fa62fe -r 0cb889db0910 loompy_to_tsv.py --- a/loompy_to_tsv.py Sat May 07 19:56:46 2022 +0000 +++ b/loompy_to_tsv.py Wed Jun 22 07:22:32 2022 +0000 @@ -20,7 +20,7 @@ allrows = [] # Build background info for all attributes and layers -loompyfile = loompy.connect(file) +loompyfile = loompy.connect(file, mode="r") row_attributes = loompyfile.ra.keys() # List of row attributes for row in row_attributes: # Each list represents rownames for row_attributes c_row = loompyfile.ra[row] diff -r 707023fa62fe -r 0cb889db0910 macros.xml --- a/macros.xml Sat May 07 19:56:46 2022 +0000 +++ b/macros.xml Wed Jun 22 07:22:32 2022 +0000 @@ -1,9 +1,9 @@ - 0.7.5 - galaxy0 + 0.7.5 + 1 - anndata + anndata loompy