Mercurial > repos > iuc > anndata_import

diff import.xml @ 12:93dd15e13e6a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 656ce7ff596a8870b77848469e85b406c7bd9344
author iuc
date Sun, 12 Nov 2023 16:42:57 +0000
parents fb9e030ffae4
children d330b3082107
line wrap: on
line diff
--- a/import.xml	Wed Jun 22 07:21:48 2022 +0000
+++ b/import.xml	Sun Nov 12 16:42:57 2023 +0000
@@ -13,7 +13,7 @@
         </xml>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="1.7.0">scanpy</requirement>
+        <requirement type="package" version="1.9.6">scanpy</requirement>
     </expand>
     <expand macro="version_command"/>
     <command detect_errors="exit_code"><![CDATA[
@@ -229,7 +229,7 @@
                 </conditional>
             <output name="anndata" value="import.mtx.no_10x.h5ad" ftype="h5ad" compare="sim_size"/>
         </test>
-        <!--<test>
+        <test expect_num_outputs="1">
             <conditional name="in">
                 <param name="adata_format" value="mtx"/>
                 <param name="matrix" value="matrix_10x_v1.2.0.mtx"/>
@@ -244,7 +244,7 @@
             </conditional>
             <output name="anndata" value="import.mtx.legacy_10x.h5ad" ftype="h5ad" compare="sim_size"/>
         </test>
-        <test>
+        <test expect_num_outputs="1">
             <conditional name="in">
                 <param name="adata_format" value="mtx"/>
                 <param name="matrix" value="matrix_10x_v3.0.0.mtx"/>
@@ -258,7 +258,7 @@
                 </conditional>
             </conditional>
             <output name="anndata" value="import.mtx.v3_10x.h5ad" ftype="h5ad" compare="sim_size"/>
-        </test>!-->
+        </test>
         <test expect_num_outputs="1">
             <param name="filetype" value="anndata"/>
             <conditional name="in">