Mercurial > repos > iuc > annotatemyids

comparison annotateMyIDs.xml @ 9:44018dd6b447 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/annotatemyids commit b71c1516972f1a9f869428c474aca5a42d08bb36"
author iuc
date Mon, 23 Nov 2020 01:03:37 +0000
parents b5d8e5475247
children f29602ae449e
comparison
equal deleted inserted replaced
8:b5d8e5475247 9:44018dd6b447
1 <tool id="annotatemyids" name="annotateMyIDs" version="3.7.0+galaxy2"> 1 <tool id="annotatemyids" name="annotateMyIDs" version="3.12.0">
2 <description>annotate a generic set of identifiers</description> 2 <description>annotate a generic set of identifiers</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="3.7.0">bioconductor-org.hs.eg.db</requirement> 4 <requirement type="package" version="3.12.0">bioconductor-org.hs.eg.db</requirement>
5 <requirement type="package" version="3.7.0">bioconductor-org.mm.eg.db</requirement> 5 <requirement type="package" version="3.12.0">bioconductor-org.mm.eg.db</requirement>
6 <requirement type="package" version="3.7.0">bioconductor-org.dm.eg.db</requirement> 6 <requirement type="package" version="3.12.0">bioconductor-org.dm.eg.db</requirement>
7 <requirement type="package" version="3.7.0">bioconductor-org.dr.eg.db</requirement> 7 <requirement type="package" version="3.12.0">bioconductor-org.dr.eg.db</requirement>
8 <requirement type="package" version="3.7.0">bioconductor-org.rn.eg.db</requirement> 8 <requirement type="package" version="3.12.0">bioconductor-org.rn.eg.db</requirement>
9 </requirements> 9 </requirements>
10 <version_command><![CDATA[ 10 <version_command><![CDATA[
11 echo $(R --version | grep version | grep -v GNU)", org.Hs.eg.db version" $(R --vanilla --slave -e "library(org.Hs.eg.db); cat(sessionInfo()\$otherPkgs\$org.Hs.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dr.eg.db version" $(R --vanilla --slave -e "library(org.Dr.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dr.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dm.eg.db version" $(R --vanilla --slave -e "library(org.Dm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Mm.eg.db version" $(R --vanilla --slave -e "library(org.Mm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Mm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Rn.eg.db version" $(R --vanilla --slave -e "library(org.Rn.eg.db); cat(sessionInfo()\$otherPkgs\$org.Rn.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 11 echo $(R --version | grep version | grep -v GNU)", org.Hs.eg.db version" $(R --vanilla --slave -e "library(org.Hs.eg.db); cat(sessionInfo()\$otherPkgs\$org.Hs.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dr.eg.db version" $(R --vanilla --slave -e "library(org.Dr.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dr.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dm.eg.db version" $(R --vanilla --slave -e "library(org.Dm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Mm.eg.db version" $(R --vanilla --slave -e "library(org.Mm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Mm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Rn.eg.db version" $(R --vanilla --slave -e "library(org.Rn.eg.db); cat(sessionInfo()\$otherPkgs\$org.Rn.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
12 ]]></version_command> 12 ]]></version_command>
13 <command detect_errors="exit_code"><![CDATA[ 13 <command detect_errors="exit_code"><![CDATA[