Mercurial > repos > iuc > arriba

diff arriba.xml @ 5:01ccd366690d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/arriba commit 3a528b3f87cff585baf4abb8ebe0be95a24044ea
author iuc
date Wed, 25 Oct 2023 08:24:37 +0000
parents f6b8b38636a4
children 45c2ec061cf9
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--- a/arriba.xml	Fri Mar 24 08:12:45 2023 +0000
+++ b/arriba.xml	Wed Oct 25 08:24:37 2023 +0000
@@ -472,8 +472,8 @@
         <test expect_num_outputs="4"> 
             <param name="input" ftype="sam" value="Aligned.out.sam"/>
             <conditional name="genome">
-                <param name="genome_source" value="history"/>
-                <param name="assembly" ftype="fasta" value="genome.fasta.gz"/>
+                <param name="genome_source" value="cached"/>
+                <param name="ref_file" value="genome_id"/>
             </conditional>
             <conditional name="genome_gtf">
                 <param name="gtf_source" value="history"/>