Mercurial > repos > iuc > artic_guppyplex

annotate test-data/primers.bed @ 5:311d11c4a68b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 9fe39fd1ad0c1a5af9e8d2d633fd3e7404adbac7
author iuc
date Mon, 24 Feb 2025 13:54:49 +0000
parents 76d6358f71b7
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
diff changeset
1 MN908947.3 45 73 SARS-CoV-2_1_LEFT 1 + ATCTCTTGTAGATCTGTTCTCTAAACGA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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2 MN908947.3 1157 1185 SARS-CoV-2_1_RIGHT 1 - GCAACTGGATAGACAGATCGAATTCTAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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3 MN908947.3 1073 1103 SARS-CoV-2_2_LEFT 2 + GTCCAAATTTTGTATTTCCCTTAAATTCCA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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4 MN908947.3 2185 2213 SARS-CoV-2_2_RIGHT 2 - TAACAATTTCCCAACCGTCTCTAAGAAA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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5 MN908947.3 2105 2135 SARS-CoV-2_3_LEFT 1 + CTAACATCTTTGGCACTGTTTATGAAAAAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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6 MN908947.3 3226 3246 SARS-CoV-2_3_RIGHT 1 - CTGCCGTCTTGTTGACCAAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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7 MN908947.3 3154 3176 SARS-CoV-2_4_LEFT 2 + GCCACTTCTGCTGCTCTTCAAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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8 MN908947.3 4270 4294 SARS-CoV-2_4_RIGHT 2 - CTTTGCCTCCTCTACAGTGTAACC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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9 MN908947.3 4187 4211 SARS-CoV-2_5_LEFT 1 + GCACTACTGAAATGCTAGCGAAAG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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10 MN908947.3 5299 5327 SARS-CoV-2_5_RIGHT 1 - ACTCTATTTGTTGGAGTGTTAACAATGC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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11 MN908947.3 5198 5229 SARS-CoV-2_6_LEFT 2 + GGTACATGTCAGCATTAAATCACACTAAAAA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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12 MN908947.3 6329 6356 SARS-CoV-2_6_RIGHT 2 - CTGACTTCAGTACATCAAACGAATTTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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13 MN908947.3 6250 6279 SARS-CoV-2_7_LEFT 1 + AATGCAACTAATAAAGCCACGTATAAACC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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14 MN908947.3 7357 7390 SARS-CoV-2_7_RIGHT 1 - GGCCATTTGTACAAGATTAATTATTAACCACAT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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15 MN908947.3 7282 7306 SARS-CoV-2_8_LEFT 2 + GTACTTGGATTGGCTGCAATCATG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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16 MN908947.3 8393 8423 SARS-CoV-2_8_RIGHT 2 - ACATGAAATCTTTAACGTTCCATATCAAAG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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17 MN908947.3 8320 8343 SARS-CoV-2_9_LEFT 1 + CGTGACCTTGGTGCTTGTATTGA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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18 MN908947.3 9430 9460 SARS-CoV-2_9_RIGHT 1 - CATAAAATAGTAGGCAAGGCATGTTACTAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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19 MN908947.3 9347 9380 SARS-CoV-2_10_LEFT 2 + CTAATATGTTTACACCACTAATTCAACCTATTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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20 MN908947.3 10461 10488 SARS-CoV-2_10_RIGHT 2 - CATGAACCATTAAGGAATGAACCCTTA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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21 MN908947.3 10381 10411 SARS-CoV-2_11_LEFT 1 + CAGACTTTTTCAGTGTTAGCTTGTTACAAT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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22 MN908947.3 11474 11507 SARS-CoV-2_11_RIGHT 1 - CTACACCTGAGTAGTTAGAAGTAACAGAGATTA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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23 MN908947.3 11390 11417 SARS-CoV-2_12_LEFT 2 + GGACACTTATGAATGTCTTGACACTCG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
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24 MN908947.3 12498 12530 SARS-CoV-2_12_RIGHT 2 - ATGTTGTACCATCACACGTATTTTTATATGTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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25 MN908947.3 12419 12444 SARS-CoV-2_13_LEFT 1 + CAAGAGATGGTTGTGTTCCCTTGAA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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26 MN908947.3 13530 13559 SARS-CoV-2_13_RIGHT 1 - TCATTGTAGATGTCAAAAGCCCTGTATAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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27 MN908947.3 13458 13480 SARS-CoV-2_14_LEFT 2 + GTTTTTAAACGGGTTTGCGGTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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28 MN908947.3 14579 14599 SARS-CoV-2_14_RIGHT 2 - GATTACCAGAAGCAGCGTGC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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29 MN908947.3 14491 14524 SARS-CoV-2_15_LEFT 1 + TAGGTGTTGTACATAATCAGGATGTAAACTTAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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30 MN908947.3 15601 15631 SARS-CoV-2_15_RIGHT 1 - GACACTCATAAAGTCTGTGTTGTAAATTGC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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31 MN908947.3 15531 15551 SARS-CoV-2_16_LEFT 2 + CAAGCTGTCACGGCCAATGT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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32 MN908947.3 16646 16671 SARS-CoV-2_16_RIGHT 2 - AAATGTCTCCTCAGTAGCTTTGAGC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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33 MN908947.3 16571 16596 SARS-CoV-2_17_LEFT 1 + TGACTGGACAAATGCTGGTGATTAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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34 MN908947.3 17686 17711 SARS-CoV-2_17_RIGHT 1 - TGTGGCCTGTTAATTGCAGATGAAA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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35 MN908947.3 17595 17627 SARS-CoV-2_18_LEFT 2 + GCTTTGGTTTATGATAATAAGCTTAAAGCACA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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36 MN908947.3 18712 18737 SARS-CoV-2_18_RIGHT 2 - AATCCAATAGAATGATGCCAACAGG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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37 MN908947.3 18636 18658 SARS-CoV-2_19_LEFT 1 + AAAATAGGACCTGAGCGCACCT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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38 MN908947.3 19762 19790 SARS-CoV-2_19_RIGHT 1 - AGCTCAAATGCTACATTAACAGGTAATG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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39 MN908947.3 19679 19712 SARS-CoV-2_20_LEFT 2 + TGAAGTACCAGTTTCTATCATTAATAACACTGT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
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40 MN908947.3 20787 20819 SARS-CoV-2_20_RIGHT 2 - AAATATTGACACAGTTGAGTATATTTTGCGAC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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41 MN908947.3 20682 20711 SARS-CoV-2_21_LEFT 1 + GTTGCTATGCCTAATCTTTACAAAATGCA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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42 MN908947.3 21801 21828 SARS-CoV-2_21_RIGHT 1 - CCATCATTAAATGGTAGGACAGGGTTA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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43 MN908947.3 21695 21723 SARS-CoV-2_22_LEFT 2 + CCTCAGTTTTACATTCAACTCAGGACTT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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44 MN908947.3 22825 22858 SARS-CoV-2_22_RIGHT 2 - GCAGCCTGTAAAATCATCTGGTAATTTATAATT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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45 MN908947.3 22742 22774 SARS-CoV-2_23_LEFT 1 + ATGTCTATGCAGATTCATTTGTAATTAGAGGT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
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46 MN908947.3 23868 23895 SARS-CoV-2_23_RIGHT 1 - GTGTTTTTGTCTTGTTCAACAGCTATT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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47 MN908947.3 23784 23811 SARS-CoV-2_24_LEFT 2 + CATTTGTGGTGATTCAACTGAATGCAG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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48 MN908947.3 24875 24905 SARS-CoV-2_24_RIGHT 2 - TGATTTGTGGTTCATAAAAATTCCTTTGTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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49 MN908947.3 24797 24822 SARS-CoV-2_25_LEFT 1 + CTGCCATTTGTCATGATGGAAAAGC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
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50 MN908947.3 25911 25937 SARS-CoV-2_25_RIGHT 1 - TGTTCAGAAATAGGACTTGTTGTGCC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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51 MN908947.3 25784 25809 SARS-CoV-2_26_LEFT 2 + GAAATGCCGTTCCAAAAACCCATTA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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52 MN908947.3 26899 26924 SARS-CoV-2_26_RIGHT 2 - TAGAAGCGGTCTGGTCAGAATAGTG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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53 MN908947.3 26818 26840 SARS-CoV-2_27_LEFT 1 + TTTCAGACTGTTTGCGCGTACG
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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54 MN908947.3 27934 27962 SARS-CoV-2_27_RIGHT 1 - CTGTAAACTACATTCTTGGTGAAATGCA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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55 MN908947.3 27832 27860 SARS-CoV-2_28_LEFT 2 + TATCTTTTGGTTCTCACTTGAACTGCAA
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
parents:
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56 MN908947.3 28945 28969 SARS-CoV-2_28_RIGHT 2 - GCTCTCAAGCTGGTTCAATCTGTC
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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57 MN908947.3 28702 28723 SARS-CoV-2_29_LEFT 1 + GATCACATTGGCACCCGCAAT
76d6358f71b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 20c6e3148d4adadc818754e77312cb11eb7af61e
iuc
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58 MN908947.3 29779 29802 SARS-CoV-2_29_RIGHT 1 - GGCTCTTCCATATAGGCAGCTCT