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comparison test-data/tmp/TEST_2/TEST_2.embl @ 0:1a27ad3d0cdf draft

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planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 7d595b05b8d595f554b57dadbf1beb0b39733af3
author iuc
date Thu, 01 Sep 2022 17:28:43 +0000
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-1:000000000000 0:1a27ad3d0cdf
1 ID NC_002127; SV 1; circular; DNA; ; PRO; 1330 BP.
2 XX
3 AC NC_002127;
4 XX
5 DE Escherichia coli o157:h7 Sakai plasmid pOSAK1, complete sequence
6 XX
7 OS Escherichia coli o157:h7 Sakai
8 OC .
9 XX
10 CC Annotated with Bakta
11 CC Software: v1.4.2
12 CC Database: v3.0
13 CC DOI: 10.1099/mgen.0.000685
14 CC URL: github.com/oschwengers/bakta
15 CC
16 CC ##Genome Annotation Summary:##
17 CC Annotation Date :: 08/22/2022, 12:58:03
18 CC Annotation Pipeline :: Bakta
19 CC Annotation Software version :: v1.4.2
20 CC Annotation Database version :: v3.0
21 CC CDSs :: 2
22 CC tRNAs :: 0
23 CC tmRNAs :: 0
24 CC rRNAs :: 0
25 CC ncRNAs :: 0
26 CC regulatory ncRNAs :: 0
27 CC CRISPR Arrays :: 0
28 CC oriCs/oriVs :: 0
29 CC oriTs :: 0
30 CC gaps :: 0
31 XX
32 FH Key Location/Qualifiers
33 FH
34 FT source 1..1330
35 FT /mol_type="genomic DNA"
36 FT /organism="Escherichia coli o157:h7 Sakai"
37 FT /strain="Sakai"
38 FT /plasmid="pOSAK1"
39 FT gene 413..736
40 FT /locus_tag="IHHALP_00005"
41 FT CDS 413..736
42 FT /product="hypothetical protein"
43 FT /locus_tag="IHHALP_00005"
44 FT /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
45 FT AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
46 FT MAD"
47 FT /codon_start=1
48 FT /transl_table=11
49 FT /protein_id="gnl|Bakta|IHHALP_00005"
50 FT /inference="ab initio prediction:Prodigal:2.6"
51 FT gene complement(join(971..1330,1..141))
52 FT /locus_tag="IHHALP_00010"
53 FT CDS complement(join(971..1330,1..141))
54 FT /product="hypothetical protein"
55 FT /locus_tag="IHHALP_00010"
56 FT /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
57 FT EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
58 FT YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
59 FT IPI"
60 FT /codon_start=1
61 FT /transl_table=11
62 FT /protein_id="gnl|Bakta|IHHALP_00010"
63 FT /inference="ab initio prediction:Prodigal:2.6"
64 XX
65 SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
66 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60
67 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120
68 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180
69 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240
70 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300
71 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360
72 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420
73 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480
74 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540
75 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600
76 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660
77 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720
78 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780
79 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840
80 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900
81 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960
82 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020
83 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080
84 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140
85 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200
86 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260
87 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320
88 cttctatttg 1330
89 //