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comparison bakta.xml @ 1:da5f1924bb2e draft

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planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
author iuc
date Fri, 16 Sep 2022 13:42:15 +0000
parents 1a27ad3d0cdf
children debdc1469b41
comparison
equal deleted inserted replaced
0:1a27ad3d0cdf 1:da5f1924bb2e
231 <test expect_num_outputs="12"> <!-- TEST_1 database + input --> 231 <test expect_num_outputs="12"> <!-- TEST_1 database + input -->
232 <section name="input_option" > 232 <section name="input_option" >
233 <param name="db_select" value="test-db-bakta"/> 233 <param name="db_select" value="test-db-bakta"/>
234 <param name="input_file" value="NC_002127.1.fna"/> 234 <param name="input_file" value="NC_002127.1.fna"/>
235 </section> 235 </section>
236 <output name="logfile" value="TEST_1/TEST_1.log" lines_diff="4"> 236 <output name="logfile" value="TEST_1/TEST_1.log" lines_diff="10">
237 <assert_contents> 237 <assert_contents>
238 <has_text_matching n="1" expression="Genome size: 1,330 bp"/> 238 <has_text_matching n="1" expression="Genome size: 1,330 bp"/>
239 <has_n_lines n="90" delta="1"/> 239 <has_n_lines n="94" delta="1"/>
240 </assert_contents> 240 </assert_contents>
241 </output> 241 </output>
242 <output name="annotation_tsv" value="TEST_1/TEST_1.tsv" lines_diff="1"/> 242 <output name="annotation_tsv" value="TEST_1/TEST_1.tsv" lines_diff="1"/>
243 <output name="annotation_gff3" value="TEST_1/TEST_1.gff3" lines_diff="2"> 243 <output name="annotation_gff3" value="TEST_1/TEST_1.gff3" lines_diff="2">
244 <assert_contents> 244 <assert_contents>