Mercurial > repos > iuc > bakta
comparison test-data/TEST_1/TEST_1.log @ 1:da5f1924bb2e draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
| author | iuc |
|---|---|
| date | Fri, 16 Sep 2022 13:42:15 +0000 |
| parents | 1a27ad3d0cdf |
| children | 865ece5ca178 |
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| 0:1a27ad3d0cdf | 1:da5f1924bb2e |
|---|---|
| 26 lookup annotations... | 26 lookup annotations... |
| 27 conduct expert systems... | 27 conduct expert systems... |
| 28 amrfinder: 0 | 28 amrfinder: 0 |
| 29 protein sequences: 0 | 29 protein sequences: 0 |
| 30 combine annotations and mark hypotheticals... | 30 combine annotations and mark hypotheticals... |
| 31 analyze hypothetical proteins: 2 | 31 detect pseudogenes... |
| 32 pseudogene candidates: 0 | |
| 33 found pseudogenes: 0 | |
| 34 analyze hypothetical proteins: 2 | |
| 32 detected Pfam hits: 0 | 35 detected Pfam hits: 0 |
| 33 calculated proteins statistics | 36 calculated proteins statistics |
| 34 revise special cases... | 37 revise special cases... |
| 35 extract sORF... | 38 extract sORF... |
| 36 potential: 22 | 39 potential: 22 |
| 66 ncRNAs: 0 | 69 ncRNAs: 0 |
| 67 ncRNA regions: 0 | 70 ncRNA regions: 0 |
| 68 CRISPR arrays: 0 | 71 CRISPR arrays: 0 |
| 69 CDSs: 2 | 72 CDSs: 2 |
| 70 hypotheticals: 2 | 73 hypotheticals: 2 |
| 74 pseudogenes: 0 | |
| 71 signal peptides: 0 | 75 signal peptides: 0 |
| 72 sORFs: 0 | 76 sORFs: 0 |
| 73 gaps: 0 | 77 gaps: 0 |
| 74 oriCs/oriVs: 0 | 78 oriCs/oriVs: 0 |
| 75 oriTs: 0 | 79 oriTs: 0 |
| 76 | 80 |
| 77 export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/2/working | 81 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/2/working |
| 78 human readable TSV... | 82 human readable TSV... |
| 79 GFF3... | 83 GFF3... |
| 80 INSDC GenBank & EMBL... | 84 INSDC GenBank & EMBL... |
| 81 genome sequences... | 85 genome sequences... |
| 82 feature nucleotide sequences... | 86 feature nucleotide sequences... |