Mercurial > repos > iuc > bakta
comparison test-data/TEST_4/TEST_4.log @ 1:da5f1924bb2e draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
| author | iuc |
|---|---|
| date | Fri, 16 Sep 2022 13:42:15 +0000 |
| parents | 1a27ad3d0cdf |
| children | 865ece5ca178 |
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| 0:1a27ad3d0cdf | 1:da5f1924bb2e |
|---|---|
| 27 conduct expert systems... | 27 conduct expert systems... |
| 28 amrfinder: 0 | 28 amrfinder: 0 |
| 29 protein sequences: 0 | 29 protein sequences: 0 |
| 30 user protein sequences: 0 | 30 user protein sequences: 0 |
| 31 combine annotations and mark hypotheticals... | 31 combine annotations and mark hypotheticals... |
| 32 analyze hypothetical proteins: 2 | 32 detect pseudogenes... |
| 33 pseudogene candidates: 0 | |
| 34 found pseudogenes: 0 | |
| 35 analyze hypothetical proteins: 2 | |
| 33 detected Pfam hits: 0 | 36 detected Pfam hits: 0 |
| 34 calculated proteins statistics | 37 calculated proteins statistics |
| 35 revise special cases... | 38 revise special cases... |
| 36 extract sORF... | 39 extract sORF... |
| 37 potential: 16 | 40 potential: 16 |
| 67 ncRNAs: 0 | 70 ncRNAs: 0 |
| 68 ncRNA regions: 0 | 71 ncRNA regions: 0 |
| 69 CRISPR arrays: 0 | 72 CRISPR arrays: 0 |
| 70 CDSs: 2 | 73 CDSs: 2 |
| 71 hypotheticals: 2 | 74 hypotheticals: 2 |
| 75 pseudogenes: 0 | |
| 72 signal peptides: 0 | 76 signal peptides: 0 |
| 73 sORFs: 0 | 77 sORFs: 0 |
| 74 gaps: 0 | 78 gaps: 0 |
| 75 oriCs/oriVs: 0 | 79 oriCs/oriVs: 0 |
| 76 oriTs: 0 | 80 oriTs: 0 |
| 77 | 81 |
| 78 export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/12/working | 82 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/12/working |
| 79 human readable TSV... | 83 human readable TSV... |
| 80 GFF3... | 84 GFF3... |
| 81 INSDC GenBank & EMBL... | 85 INSDC GenBank & EMBL... |
| 82 genome sequences... | 86 genome sequences... |
| 83 feature nucleotide sequences... | 87 feature nucleotide sequences... |