Mercurial > repos > iuc > bakta
diff test-data/TEST_4/TEST_4.embl @ 0:1a27ad3d0cdf draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 7d595b05b8d595f554b57dadbf1beb0b39733af3
| author | iuc |
|---|---|
| date | Thu, 01 Sep 2022 17:28:43 +0000 |
| parents | |
| children | da5f1924bb2e |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/TEST_4/TEST_4.embl Thu Sep 01 17:28:43 2022 +0000 @@ -0,0 +1,87 @@ +ID p2; ; circular; DNA; ; PRO; 1330 BP. +XX +AC p2; +XX +DE plasmid pOSAK1, complete sequence +XX +OS . +OC . +XX +CC Annotated with Bakta +CC Software: v1.4.2 +CC Database: v3.0 +CC DOI: 10.1099/mgen.0.000685 +CC URL: github.com/oschwengers/bakta +CC +CC ##Genome Annotation Summary:## +CC Annotation Date :: 08/22/2022, 13:08:00 +CC Annotation Pipeline :: Bakta +CC Annotation Software version :: v1.4.2 +CC Annotation Database version :: v3.0 +CC CDSs :: 2 +CC tRNAs :: 0 +CC tmRNAs :: 0 +CC rRNAs :: 0 +CC ncRNAs :: 0 +CC regulatory ncRNAs :: 0 +CC CRISPR Arrays :: 0 +CC oriCs/oriVs :: 0 +CC oriTs :: 0 +CC gaps :: 0 +XX +FH Key Location/Qualifiers +FH +FT source 1..1330 +FT /mol_type="genomic DNA" +FT /plasmid="pOSAK1" +FT gene 413..736 +FT /locus_tag="IHHALP_00005" +FT CDS 413..736 +FT /product="hypothetical protein" +FT /locus_tag="IHHALP_00005" +FT /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA +FT AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL +FT MAD" +FT /codon_start=1 +FT /transl_table=4 +FT /protein_id="gnl|Bakta|IHHALP_00005" +FT /inference="ab initio prediction:Prodigal:2.6" +FT gene complement(join(971..1330,1..141)) +FT /locus_tag="IHHALP_00010" +FT CDS complement(join(971..1330,1..141)) +FT /product="hypothetical protein" +FT /locus_tag="IHHALP_00010" +FT /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA +FT EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR +FT YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG +FT IPI" +FT /codon_start=1 +FT /transl_table=4 +FT /protein_id="gnl|Bakta|IHHALP_00010" +FT /inference="ab initio prediction:Prodigal:2.6" +XX +SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other; + ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60 + gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120 + agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180 + tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240 + tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300 + gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360 + cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420 + acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480 + agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540 + acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600 + agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660 + cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720 + gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780 + aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840 + tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900 + agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960 + tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020 + ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080 + cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140 + taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200 + aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260 + tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320 + cttctatttg 1330 +//