diff test-data/TEST_1/TEST_1.log @ 1:da5f1924bb2e draft

planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
author iuc
date Fri, 16 Sep 2022 13:42:15 +0000
parents 1a27ad3d0cdf
children 865ece5ca178
line wrap: on
line diff
--- a/test-data/TEST_1/TEST_1.log	Thu Sep 01 17:28:43 2022 +0000
+++ b/test-data/TEST_1/TEST_1.log	Fri Sep 16 13:42:15 2022 +0000
@@ -28,7 +28,10 @@
 		amrfinder: 0
 		protein sequences: 0
 	combine annotations and mark hypotheticals...
-	analyze hypothetical proteins: 2
+	detect pseudogenes...
+		pseudogene candidates: 0
+		found pseudogenes: 0
+analyze hypothetical proteins: 2
 	detected Pfam hits: 0 
 	calculated proteins statistics
 	revise special cases...
@@ -68,13 +71,14 @@
 	CRISPR arrays: 0
 	CDSs: 2
 	  hypotheticals: 2
+	  pseudogenes: 0
 	  signal peptides: 0
 	sORFs: 0
 	gaps: 0
 	oriCs/oriVs: 0
 	oriTs: 0
 
-export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/2/working
+export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/2/working
 	human readable TSV...
 	GFF3...
 	INSDC GenBank & EMBL...