Mercurial > repos > iuc > bakta
view test-data/TEST_4/TEST_4.embl @ 3:865ece5ca178 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 9f516ce5c84b251b9041cd79129e5b5e1979a738
author | iuc |
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date | Fri, 10 Feb 2023 14:20:09 +0000 |
parents | da5f1924bb2e |
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ID p2; ; circular; DNA; ; PRO; 1330 BP. XX AC p2; XX DE plasmid pOSAK1, complete sequence XX OS . OC . XX CC Annotated with Bakta CC Software: v1.5.0 CC Database: v4.0 CC DOI: 10.1099/mgen.0.000685 CC URL: github.com/oschwengers/bakta CC CC ##Genome Annotation Summary:## CC Annotation Date :: 09/16/2022, 07:32:50 CC Annotation Pipeline :: Bakta CC Annotation Software version :: v1.5.0 CC Annotation Database version :: v4.0 CC CDSs :: 2 CC tRNAs :: 0 CC tmRNAs :: 0 CC rRNAs :: 0 CC ncRNAs :: 0 CC regulatory ncRNAs :: 0 CC CRISPR Arrays :: 0 CC oriCs/oriVs :: 0 CC oriTs :: 0 CC gaps :: 0 CC pseudogenes :: 0 XX FH Key Location/Qualifiers FH FT source 1..1330 FT /mol_type="genomic DNA" FT /plasmid="pOSAK1" FT gene 413..736 FT /locus_tag="IHHALP_00005" FT CDS 413..736 FT /product="hypothetical protein" FT /locus_tag="IHHALP_00005" FT /protein_id="gnl|Bakta|IHHALP_00005" FT /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA FT AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL FT MAD" FT /codon_start=1 FT /transl_table=4 FT /inference="ab initio prediction:Prodigal:2.6" FT gene complement(join(971..1330,1..141)) FT /locus_tag="IHHALP_00010" FT CDS complement(join(971..1330,1..141)) FT /product="hypothetical protein" FT /locus_tag="IHHALP_00010" FT /protein_id="gnl|Bakta|IHHALP_00010" FT /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA FT EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR FT YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG FT IPI" FT /codon_start=1 FT /transl_table=4 FT /inference="ab initio prediction:Prodigal:2.6" XX SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other; ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320 cttctatttg 1330 //