# HG changeset patch
# User iuc
# Date 1662053323 0
# Node ID 1a27ad3d0cdf2a24e32bf1ab65441238fe81578c

planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 7d595b05b8d595f554b57dadbf1beb0b39733af3

diff -r 000000000000 -r 1a27ad3d0cdf bakta.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bakta.xml	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,507 @@
+<tool id="bakta" name="Bakta" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
+    <description>
+        genome annotation via alignment-free sequence identification
+    </description>
+    <macros>
+        <import>macro.xml</import>
+    </macros>
+    <expand macro='edam'/>
+    <expand macro='xrefs'/>
+    <expand macro="requirements"/>
+    <expand macro="version_command"/>
+
+    <command detect_errors="aggressive"><![CDATA[
+        bakta
+        #*======================================
+                    CPU option
+        ======================================*#
+        --threads \${GALAXY_SLOTS:-1}
+        #*======================================
+                    Bakta database
+        ======================================*#
+        --db $input_option.db_select.fields.path
+        #if $input_option.min_contig_length
+            --min-contig-length $input_option.min_contig_length
+        #else if $annotation.compliant
+            --min-contig-length 200
+        #else
+            --min-contig-length 1
+        #end if
+        --prefix bakta_output
+        #*======================================
+                  Organism options
+              genus/species/strain/plasmid
+        ======================================*#
+        #if $organism.genus
+            --genus '$organism.genus'
+        #end if
+        #if $organism.species
+            --species '$organism.species'
+        #end if
+        #if $organism.strain
+            --strain '$organism.strain'
+        #end if
+        #if $organism.plasmid
+            --plasmid '$organism.plasmid'
+        #end if
+        #*======================================
+                    Annotation options
+            gram type, prodigal/protein file
+        ======================================*#
+        $annotation.complete
+        #if $annotation.prodigal
+            --prodigal-tf '$annotation.prodigal'
+        #end if
+        #if $annotation.translation_table
+            --translation-table '$annotation.translation_table'
+        #end if
+        #if $annotation.gram
+            --gram '$annotation.gram'
+        #end if
+        $annotation.keep_contig_headers
+        #if $annotation.replicons
+            --replicons '$annotation.replicons'
+        #end if
+        $annotation.compliant
+        #if $annotation.proteins
+            --proteins '$annotation.proteins'
+        #end if
+        #*======================================
+                    Workflow OPTIONS
+         skip some step of the bakta analysis
+        ======================================*#
+
+        #if "skip_trna" in $workflow.skip_analysis
+            --skip-trna
+        #end if
+        #if "skip_tmrna" in $workflow.skip_analysis
+            --skip-tmrna
+        #end if
+        #if "skip_rrna" in $workflow.skip_analysis
+            --skip-rrna
+        #end if
+        #if "skip_ncrna" in $workflow.skip_analysis
+            --skip-ncrna
+        #end if
+        #if "skip_ncrna_region" in $workflow.skip_analysis
+            --skip-ncrna-region
+        #end if
+        #if "skip_crispr" in $workflow.skip_analysis
+            --skip-crispr
+        #end if
+        #if "skip_cds" in $workflow.skip_analysis
+            --skip-cds
+        #end if
+        #if "skip_sorf" in $workflow.skip_analysis
+            --skip-sorf
+        #end if
+        #if "skip_gap" in $workflow.skip_analysis
+            --skip-gap
+        #end if
+        #if "skip_ori" in $workflow.skip_analysis
+            --skip-ori
+        #end if
+
+        #*======================================
+                    Genome file
+        ======================================*#
+        '$input_option.input_file'
+        #*======================================
+                    LOG file
+        ======================================*#
+        | tee '$logfile'
+        ]]></command>
+    <inputs>
+      <!-- DB and file INPUT -->
+        <section name="input_option" title="Input/Output options" expanded="true">
+            <param name="db_select" type="select" label="The bakta database">
+                <options from_data_table="bakta_database">
+                    <validator message="No bakta database is available" type="no_options"/>
+                </options>
+            </param>
+            <param name="input_file" type="data" format="fasta,fasta.gz" label="Select genome in fasta format"/>
+            <param name="min_contig_length" type="integer" optional="true" min="0" label="Minimum contig size" help="Minimum contig size (default = 1; 200 in compliant mode) (--min-contig-length)"/>
+        </section>
+        <!-- Organism INFORMATION OPTIONS -->
+        <section name="organism" title="Optional organism options" expanded="false">
+            <param argument="--genus" type="text" optional="true" label="Specify genus name" help="ex. Escherichia">
+                <validator type="regex">^[a-zA-Z]+$</validator>
+            </param>
+            <param argument="--species" type="text" optional="true" label="Specify species name" help="ex. 'coli O157:H7'">
+                <validator type="regex">^[a-zA-Z0-9\s(:\-/)]+$</validator>
+            </param>
+            <param argument="--strain" type="text" optional="true" label="Specify strain name" help="ex. Sakai">
+                <validator type="regex">^[a-zA-Z]+$</validator>
+            </param>
+            <param argument="--plasmid" type="text" optional="true" label="Specify plasmid name" help="ex. pOSAK1">
+                <validator type="regex">^[a-zA-Z0-9\s(:\-/)]+$</validator>
+            </param>
+        </section>
+        <!-- ANNOTATION -->
+        <section name="annotation" title="Optional annotation">
+            <param argument="--complete" type="boolean" truevalue="--complete" falsevalue="" label="Complete replicons" help="All sequences are complete replicons (chromosome/plasmid[s])"/>
+            <param argument="--prodigal" type="data" format="txt" optional="true" label="Prodigal file" help="Prodigal training file for CDS prediction"/>
+            <param name="translation_table"  type="select" optional="true" label="Translation table" help="Default is the bacterial table 11">
+                <option value="4">4 Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code</option>
+                <option value="11" selected="true">11 Bacterial, Archaeal and Plant Plastid Code</option>
+            </param>
+            <param argument="--gram" type="select" optional="true" label="Gram type for signal peptide predictions" help="Gram type +/- or unknown. Default: unknown">
+                <option value="+">Gram+</option>
+                <option value="-">Gram-</option>
+                <option value="?" selected="true">Unknown</option>
+            </param>
+            <param name="keep_contig_headers" type="boolean" truevalue="--keep-contig-headers" falsevalue="" label="Keep original contig header (--keep-contig-headers)"/>
+            <param argument="--replicons" type="data" format="tsv,csv" optional="true" label="Replicon information table (tsv/csv)" help=""/>
+            <param argument="--compliant" type="boolean" truevalue="--compliant" falsevalue="" label="Force Genbank/ENA/DDJB compliance"/>
+            <param argument="--proteins" type="data" format="fasta" optional="true" label="Protein fasta file" help="Fasta file of trusted protein sequences for CDS annotation"/>
+        </section>
+        <!-- PARAMETER FOR WORKFLOW ANALYSIS -->
+        <section name="workflow" title="Workflow option to skip steps">
+            <param name="skip_analysis" type="select" display="checkboxes" multiple="true"  label="Select steps to skip">
+                <option value="skip_trna"> Skip tRNA detection and annotation </option>
+                <option value="skip_tmrna"> Skip tmRNA detection and annotation </option>
+                <option value="skip_rrna"> Skip rRNA detection and annotation </option>
+                <option value="skip_ncrna"> Skip ncRNA detection and annotation </option>
+                <option value="skip_ncrna_region"> Skip ncRNA region detection and annotation </option>
+                <option value="skip_crispr"> Skip CRISPR array detection and annotation </option>
+                <option value="skip_cds"> Skip CDS detection and annotation </option>
+                <option value="skip_sorf"> Skip sORF detection and annotation </option>
+                <option value="skip_gap"> Skip gap detection and annotation </option>
+                <option value="skip_ori"> Skip oriC/oriT detection and annotation </option>
+            </param>
+        </section>
+        <section name="output_files" title="Selection of the output files">
+          <param name="output_selection" type="select" display="checkboxes" multiple="true"  label="Output files selection">
+              <option value="file_tsv" selected="true"> Annotation file in TSV </option>
+              <option value="file_gff3" selected="true"> Annotation and sequence in GFF3 </option>
+              <option value="file_gbff" selected="true"> Annotations and sequences in GenBank format </option>
+              <option value="file_embl" selected="true"> Annotations and sequences in EMBL format </option>
+              <option value="file_fna" selected="true"> Replicon/contig DNA sequences as FASTA  </option>
+              <option value="file_ffn" selected="true"> Feature nucleotide sequences as FASTA </option>
+              <option value="file_faa" selected="true"> CDS/sORF amino acid sequences as FASTA </option>
+              <option value="hypo_tsv" selected="true"> Hypothetical protein CDS in TSV</option>
+              <option value="hypo_fa" selected="true"> Hypothetical protein CDS amino sequences as FASTA</option>
+              <option value="sum_txt" selected="true"> Summary as TXT</option>
+              <option value="file_json" selected="true"> Information on each annotated feature as JSON </option>
+              <option value="log_txt" selected="true"> Log file as TXT </option>
+          </param>
+        </section>
+
+    </inputs>
+    <outputs>
+        <data name="annotation_tsv" format="tabular" from_work_dir="bakta_output.tsv" label="${tool.name} on ${on_string}: bakta_output.tsv">
+            <filter> output_files['output_selection'] and "file_tsv" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_gff3" format="gff3" from_work_dir="bakta_output.gff3" label="${tool.name} on ${on_string}: bakta_output.gff3">
+            <filter> output_files['output_selection'] and "file_gff3" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_gbff" format="tabular" from_work_dir="bakta_output.gbff" label="${tool.name} on ${on_string}: bakta_output.gbff">
+            <filter> output_files['output_selection'] and "file_gbff" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_embl" format="tabular" from_work_dir="bakta_output.embl" label="${tool.name} on ${on_string}: bakta_output.embl">
+            <filter> output_files['output_selection'] and "file_embl" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_fna" format="fasta" from_work_dir="bakta_output.fna" label="${tool.name} on ${on_string}: bakta_output.fna">
+            <filter> output_files['output_selection'] and "file_fna" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_ffn" format="fasta" from_work_dir="bakta_output.ffn" label="${tool.name} on ${on_string}: bakta_output.ffn">
+            <filter> output_files['output_selection'] and "file_ffn" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_faa" format="fasta" from_work_dir="bakta_output.faa" label="${tool.name} on ${on_string}: bakta_output.faa">
+            <filter> output_files['output_selection'] and "file_faa" in output_files['output_selection'] </filter>
+        </data>
+        <data name="hypotheticals_tsv" format="tabular" from_work_dir="bakta_output.hypotheticals.tsv" label="${tool.name} on ${on_string}: bakta_output.hypotheticals.tsv">
+            <filter> output_files['output_selection'] and "hypo_tsv" in output_files['output_selection'] </filter>
+        </data>
+        <data name="hypotheticals_faa" format="fasta" from_work_dir="bakta_output.hypotheticals.faa" label="${tool.name} on ${on_string}: bakta_output.hypotheticals.faa">
+          <filter> output_files['output_selection'] and "hypo_fa" in output_files['output_selection'] </filter>
+        </data>
+        <data name="summary_txt" format="txt" from_work_dir="bakta_output.txt" label="${tool.name} on ${on_string}: bakta_summary.txt">
+            <filter> output_files['output_selection'] and "sum_txt" in output_files['output_selection'] </filter>
+        </data>
+        <data name="annotation_json" format="json" from_work_dir="bakta_output.json" label="${tool.name} on ${on_string}: bakta_output.json">
+            <filter> output_files['output_selection'] and "file_json" in output_files['output_selection'] </filter>
+        </data>
+        <data name="logfile" format="txt" label="${tool.name} on ${on_string}: log file">
+            <filter> output_files['output_selection'] and "log_txt" in output_files['output_selection'] </filter>
+        </data>
+    </outputs>
+
+    <tests>
+      <test expect_num_outputs="12"> <!-- TEST_1 database + input -->
+          <section name="input_option" >
+              <param name="db_select" value="test-db-bakta"/>
+              <param name="input_file" value="NC_002127.1.fna"/>
+          </section>
+          <output name="logfile" value="TEST_1/TEST_1.log" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching n="1" expression="Genome size: 1,330 bp"/>
+                  <has_n_lines n="90" delta="1"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_tsv" value="TEST_1/TEST_1.tsv" lines_diff="1"/>
+          <output name="annotation_gff3" value="TEST_1/TEST_1.gff3" lines_diff="2">
+              <assert_contents>
+                  <has_text_matching expression="TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_gbff" value="TEST_1/TEST_1.gbff" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_embl" value="TEST_1/TEST_1.embl" lines_diff="2"/>
+          <output name="annotation_fna" value="TEST_1/TEST_1.fna"/>
+          <output name="annotation_ffn" value="TEST_1/TEST_1.ffn"/>
+          <output name="annotation_faa" value="TEST_1/TEST_1.faa"/>
+          <output name="hypotheticals_tsv" value="TEST_1/TEST_1.hypotheticals.tsv"/>
+          <output name="hypotheticals_faa" value="TEST_1/TEST_1.hypotheticals.faa"/>
+          <output name="summary_txt" value="TEST_1/TEST_1.txt">
+              <assert_contents>
+                  <has_text_matching expression="N50: 1330"/>
+              </assert_contents>
+            </output>
+          <output name="annotation_json" value="TEST_1/TEST_1.json" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="0.6203007518796992"/>
+              </assert_contents>
+          </output>
+      </test>
+      <test expect_num_outputs="12"> <!-- TEST_2 another input, add organism info some annotations and skip 2 steps  -->
+          <section name="input_option" >
+              <param name="db_select" value="test-db-bakta"/>
+              <param name="input_file" value="NC_002127.1.fna"/>
+              <param name="min_contig_length" value="250"/>
+          </section>
+          <section name="organism">
+              <param name="genus" value="Escherichia"/>
+              <param name="species" value="coli O157:H7"/>
+              <param name="strain" value="Sakai"/>
+              <param name="plasmid" value="pOSAK1"/>
+          </section>
+          <section name="annotation">
+              <param name="--gram" value="-"/>
+              <param name="keep_contig_headers" value="true"/>
+          </section>
+          <section name="workflow">
+              <param name="skip_analysis" value="skip_trna,skip_tmrna"/>
+          </section>
+          <output name="logfile" value="TEST_2/TEST_2.log" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="Genome size: 1,330 bp"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_tsv" value="TEST_2/TEST_2.tsv" lines_diff="2">
+              <assert_contents>
+                  <has_text_matching expression="IHHALP_00005"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_gff3" value="TEST_2/TEST_2.gff3" lines_diff="2">
+              <assert_contents>
+                  <has_text_matching expression="ID=NC_002127.1;Name=NC_002127.1;Is_circular=true"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_gbff" value="TEST_2/TEST_2.gbff" lines_diff="5">
+              <assert_contents>
+                  <has_text_matching expression="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_embl" value="TEST_2/TEST_2.embl" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_fna" value="TEST_2/TEST_2.fna"/>
+          <output name="annotation_ffn" value="TEST_2/TEST_2.ffn"/>
+          <output name="annotation_faa" value="TEST_2/TEST_2.faa"/>
+          <output name="hypotheticals_tsv" value="TEST_2/TEST_2.hypotheticals.tsv"/>
+          <output name="hypotheticals_faa" value="TEST_2/TEST_2.hypotheticals.faa"/>
+          <output name="summary_txt" value="TEST_2/TEST_2.txt">
+              <assert_contents>
+                  <has_text_matching expression="N50: 1330"/>
+              </assert_contents>
+            </output>
+          <output name="annotation_json" value="TEST_2/TEST_2.json" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="0.4518796992481203"/>
+              </assert_contents>
+          </output>
+      </test>
+      <test expect_num_outputs="12"> <!-- TEST_3 test all skip steps  -->
+          <section name="input_option" >
+              <param name="db_select" value="test-db-bakta"/>
+              <param name="input_file" value="NC_002127.1.fna"/>
+              <param name="min_contig_length" value="350"/>
+          </section>
+          <section name="workflow">
+              <param name="skip_analysis" value="skip_trna,skip_tmrna,skip_rrna,skip_ncrna,skip_ncrna_region,skip_crispr,skip_cds,skip_sorf,skip_gap,skip_ori"/>
+          </section>
+          <output name="logfile" value="TEST_3/TEST_3.log" lines_diff="4">
+              <assert_contents>
+                  <has_text_matching expression="Genome size: 1,330 bp"/>
+              </assert_contents>
+          </output>
+          <output name="annotation_tsv" value="TEST_3/TEST_3.tsv" lines_diff="1"/>
+          <output name="annotation_gff3" value="TEST_3/TEST_3.gff3" lines_diff="2"/>
+          <output name="annotation_gbff" value="TEST_3/TEST_3.gbff" lines_diff="10"/>
+          <output name="annotation_embl" value="TEST_3/TEST_3.embl" lines_diff="4"/>
+          <output name="annotation_fna" value="TEST_3/TEST_3.fna"/>
+          <output name="annotation_ffn" value="TEST_3/TEST_3.ffn"/>
+          <output name="annotation_faa" value="TEST_3/TEST_3.faa"/>
+          <output name="annotation_json" value="TEST_3/TEST_3.json" lines_diff="4"/>
+        </test>
+        <test expect_num_outputs="12"> <!-- TEST_4 annotations   -->
+            <section name="input_option" >
+                <param name="db_select" value="test-db-bakta"/>
+                <param name="input_file" value="NC_002127.1.fna"/>
+            </section>
+            <section name="annotation">
+                <param name="complete" value="true"/>
+                <param name="translation_table" value="4"/>
+                <param name="prodigal" value="prodigal.tf"/>
+                <param name="replicons" value="replicons.tsv"/>
+                <param name="compliant" value="true"/>
+                <param name="proteins" value="user-proteins.faa"/>
+            </section>
+            <output name="logfile" value="TEST_4/TEST_4.log" lines_diff="4">
+                <assert_contents>
+                    <has_text_matching expression="potential: 16"/>
+                </assert_contents>
+            </output>
+            <output name="annotation_tsv" value="TEST_4/TEST_4.tsv" lines_diff="2"/>
+            <output name="annotation_gff3" value="TEST_4/TEST_4.gff3" lines_diff="2">
+                <assert_contents>
+                    <has_text_matching expression="ID=IHHALP_00005_gene;locus_tag=IHHALP_00005"/>
+                </assert_contents>
+            </output>
+            <output name="annotation_gbff" value="TEST_4/TEST_4.gbff" lines_diff="4">
+                <assert_contents>
+                    <has_text_matching expression="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA"/>
+                </assert_contents>
+            </output>
+            <output name="annotation_embl" value="TEST_4/TEST_4.embl" lines_diff="4">
+                <assert_contents>
+                    <has_text_matching expression="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA"/>
+                </assert_contents>
+            </output>
+            <output name="annotation_fna" value="TEST_4/TEST_4.fna"/>
+            <output name="annotation_ffn" value="TEST_4/TEST_4.ffn"/>
+            <output name="annotation_faa" value="TEST_4/TEST_4.faa"/>
+            <output name="hypotheticals_tsv" value="TEST_4/TEST_4.hypotheticals.tsv"/>
+            <output name="hypotheticals_faa" value="TEST_4/TEST_4.hypotheticals.faa"/>
+            <output name="summary_txt" value="TEST_4/TEST_4.txt">
+                <assert_contents>
+                    <has_text_matching expression="GC: 45.2"/>
+                </assert_contents>
+              </output>
+            <output name="annotation_json" value="TEST_4/TEST_4.json" lines_diff="4">
+                <assert_contents>
+                    <has_text_matching expression="0.4518796992481203"/>
+                </assert_contents>
+            </output>
+        </test>
+        <test expect_num_outputs="2"> <!-- TEST_5 skip all steps and keep only the logfile and summary -->
+            <section name="input_option" >
+                <param name="db_select" value="test-db-bakta"/>
+                <param name="input_file" value="NC_002127.1.fna"/>
+            </section>
+            <section name="annotation">
+                <param name="complete" value="true"/>
+                <param name="translation_table" value="4"/>
+            </section>
+            <section name="workflow">
+                <param name="skip_analysis" value="skip_trna,skip_tmrna,skip_rrna,skip_ncrna,skip_ncrna_region,skip_crispr,skip_cds,skip_sorf,skip_gap,skip_ori"/>
+            </section>
+            <section name="output_files">
+                <param name="output_selection" value="log_txt,sum_txt"/>
+            </section>
+            <output name="logfile" value="TEST_5/TEST_5.log" lines_diff="4"/>
+            <output name="summary_txt" value="TEST_5/TEST_5.txt" lines_diff="4"/>
+        </test>
+    </tests>
+    <help><![CDATA[**What it does**
+          Bakta is a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs.
+
+        *Comprehensive & taxonomy-independent database*
+          Bakta provides a large and taxonomy-independent database using UniProt's entire UniRef protein sequence cluster universe.
+
+        *Protein sequence identification*
+          Bakta exactly identifies known identical protein sequences (IPS) from RefSeq and UniProt
+          allowing the fine-grained annotation of gene alleles (AMR) or closely related but distinct protein families.
+          This is achieved via an alignment-free sequence identification (AFSI) approach
+          using full-length MD5 protein sequence hash digests.
+        *Small proteins/short open reading frames*
+          Bakta detects and annotates small proteins/short open reading frames (sORF).
+
+        *Expert annotation systems*
+          To provide high quality annotations for certain proteins of higher interest, e.g. AMR & VF genes,
+          Bakta includes & merges different expert annotation systems.
+          Currently, Bakta uses NCBI's AMRFinderPlus for AMR gene annotations
+          as well as an generalized protein sequence expert system with distinct
+          coverage, identity and priority values for each sequence, currenlty comprising the VFDB as well as NCBI's BlastRules.
+
+        *Comprehensive workflow*
+          Bakta annotates ncRNA cis-regulatory regions, oriC/oriV/oriT
+          and assembly gaps as well as standard feature types: tRNA, tmRNA, rRNA, ncRNA genes, CRISPR, CDS.
+
+        *GFF3 & INSDC conform annotations*
+          Bakta writes GFF3 and INSDC-compliant (Genbank & EMBL) annotation files ready for submission
+          (checked via GenomeTools GFF3Validator, table2asn_GFF and ENA Webin-CLI for GFF3 and EMBL file formats,
+          respectively for representative genomes of all ESKAPE species).
+
+        *Bacteria & plasmids*
+          Bakta was designed to annotate bacteria (isolates & MAGs) and plasmids, only.
+
+        **Input options**
+          1. Choose a genome or assembly in fasta format to use bakta annotations
+          2. Choose A version of the Bakta database
+
+        **Organism options**
+        You can specify informations about analysed fasta as text input for:
+        - genus
+        - species
+        - strain
+        - plasmid
+
+        **Annotation options**
+        1. You can specify if all sequences (chromosome or plasmids) are complete or not
+        2. You can add your own prodigal traingin file for CDS predictionœ
+        3. The translation table could be modified, default is the 11th for bacteria
+        4. You can specify if bacteria is gram -/+ or unknonw (default value unknow)
+        5. You can keep the name of contig present in the input file
+        6. You can specify your own replicon table as a TSV/CSV file
+        7. The compliance option is for ready to submit annotation file to Public database
+        as ENA, Genbank EMBL
+        8. You can specify a protein sequence file for annotation in GenBank or fasta formats
+        Using the Fasta format, each reference sequence can be provided in a short or long format:
+
+        # short:
+        >id gene~~~product~~~dbxrefs
+        MAQ...
+
+        # long:
+        >id min_identity~~~min_query_cov~~~min_subject_cov~~~gene~~~product~~~dbxrefs
+        MAQ...
+
+        **Skip steps**
+        Some steps could be skiped:
+        - skip-trna           Skip tRNA detection & annotation
+        - skip-tmrna          Skip tmRNA detection & annotation
+        - skip-rrna           Skip rRNA detection & annotation
+        - skip-ncrna          Skip ncRNA detection & annotation
+        - skip-ncrna-region   Skip ncRNA region detection & annotation
+        - skip-crispr         Skip CRISPR array detection & annotation
+        - skip-cds            Skip CDS detection & annotation
+        - skip-pseudo         Skip pseudogene detection & annotation
+        - skip-sorf           Skip sORF detection & annotation
+        - skip-gap            Skip gap detection & annotation
+        - skip-ori            Skip oriC/oriT detection & annotation
+
+        **Output options**
+        Bakta produce numbers of output files, you can select what type of file you want:
+        - Summary of the annotation
+        - Annotated files
+        - Sequence files for nucleotide and/or amino acid
+    ]]></help>
+    <expand macro="citations"/>
+</tool>
diff -r 000000000000 -r 1a27ad3d0cdf macro.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macro.xml	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,28 @@
+<macros>
+    <token name="@TOOL_VERSION@">1.4.2</token>
+    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@PROFILE@">21.05</token>
+    <xml name="version_command">
+        <version_command><![CDATA[bakta --version]]></version_command>
+    </xml>
+    <xml name="edam">
+      <edam_topics>
+          <edam_topic>topic_3174</edam_topic>
+      </edam_topics>
+    </xml>
+    <xml name="xrefs">
+        <xrefs>
+            <xref type='bio.tools'>Bakta</xref>
+        </xrefs>
+    </xml>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="@TOOL_VERSION@">bakta</requirement>
+        </requirements>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.1099/mgen.0.000685</citation>
+        </citations>
+    </xml>
+</macros>
diff -r 000000000000 -r 1a27ad3d0cdf test-data/NC_002127.1.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/NC_002127.1.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,20 @@
+>NC_002127.1 Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTT
+TCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCA
+TCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGT
+CTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGC
+TTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTA
+TTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAG
+GAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTA
+AGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAA
+ACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTAT
+CACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTA
+TGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGT
+TCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGA
+ATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTT
+TAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTA
+ACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATT
+AAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,87 @@
+ID   contig_1; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   contig_1;
+XX
+DE   plasmid unnamed1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 13:06:54
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="unnamed1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>contig_1 [completeness=complete] [topology=circular] [gcode=11]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,83 @@
+LOCUS       contig_1                1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid unnamed1, complete sequence.
+ACCESSION   contig_1
+VERSION     contig_1
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 13:06:54
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="unnamed1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,36 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region contig_1 1 1330
+contig_1	Bakta	region	1	1330	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
+contig_1	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein
+contig_1	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein
+##FASTA
+>contig_1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+contig_1	413	736	+	IHHALP_00005	12.1	10.4		
+contig_1	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,90 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "contig_1",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "contig_1",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "contig_1",
+            "description": "[completeness=complete] [topology=circular] [gcode=11]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "unnamed1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 13:06:53",
+        "end": "2022-08-22 13:06:54"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,90 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+predict tRNAs...
+	found: 0
+predict tmRNAs...
+	found: 0
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 22
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/2/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:01 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+contig_1	cds	413	736	+	IHHALP_00005		hypothetical protein	
+contig_1	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_1/TEST_1.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_1/TEST_1.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+ID   NC_002127; SV 1; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   NC_002127;
+XX
+DE   Escherichia coli o157:h7 Sakai plasmid pOSAK1, complete sequence
+XX
+OS   Escherichia coli o157:h7 Sakai
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 13:07:08
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /organism="Escherichia coli o157:h7 Sakai"
+FT                   /strain="Sakai"
+FT                   /plasmid="pOSAK1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>NC_002127.1 Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,85 @@
+LOCUS       NC_002127.1             1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  Escherichia coli o157:h7 Sakai plasmid pOSAK1, complete sequence.
+ACCESSION   NC_002127
+VERSION     NC_002127.1
+KEYWORDS    .
+SOURCE      Escherichia coli o157:h7 Sakai
+  ORGANISM  Escherichia coli o157:h7 Sakai
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 13:07:08
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /organism="Escherichia coli o157:h7 Sakai"
+                     /strain="Sakai"
+                     /plasmid="pOSAK1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,37 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# organism Escherichia coli o157:h7 Sakai
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region NC_002127.1 1 1330
+NC_002127.1	Bakta	region	1	1330	.	+	.	ID=NC_002127.1;Name=NC_002127.1;Is_circular=true
+NC_002127.1	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein
+NC_002127.1	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein
+##FASTA
+>NC_002127.1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+NC_002127.1	413	736	+	IHHALP_00005	12.1	10.4		
+NC_002127.1	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+{
+    "genome": {
+        "genus": "Escherichia",
+        "species": "coli o157:h7",
+        "strain": "Sakai",
+        "plasmid": "pOSAK1",
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "NC_002127.1",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "NC_002127.1",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "NC_002127.1",
+            "description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "name": "pOSAK1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 13:07:07",
+        "end": "2022-08-22 13:07:08"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,88 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 22
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/4/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+NC_002127.1	cds	413	736	+	IHHALP_00005		hypothetical protein	
+NC_002127.1	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_2/TEST_2.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_2/TEST_2.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,62 @@
+ID   contig_1; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   contig_1;
+XX
+DE   plasmid unnamed1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 13:07:22
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     0
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="unnamed1"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.faa
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.ffn
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>contig_1 [completeness=complete] [topology=circular] [gcode=11]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,58 @@
+LOCUS       contig_1                1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid unnamed1, complete sequence.
+ACCESSION   contig_1
+VERSION     contig_1
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 13:07:22
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     0
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="unnamed1"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,34 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region contig_1 1 1330
+contig_1	Bakta	region	1	1330	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
+##FASTA
+>contig_1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,42 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.0
+    },
+    "features": [],
+    "sequences": [
+        {
+            "id": "contig_1",
+            "description": "[completeness=complete] [topology=circular] [gcode=11]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "unnamed1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 13:07:21",
+        "end": "2022-08-22 13:07:22"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,55 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+skip rRNA prediction...
+skip ncRNA prediction...
+skip ncRNA region prediction...
+skip CRISPR array prediction...
+skip CDS prediction...
+skip sORF prediction...
+skip gap annotation...
+skip oriC/T annotation...
+apply feature overlap filters...
+select features and create locus tags...
+selected: 0
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 0.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 0
+	  hypotheticals: 0
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/6/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_3/TEST_3.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_3/TEST_3.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,3 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,87 @@
+ID   p2; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   p2;
+XX
+DE   plasmid pOSAK1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 13:08:00
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="pOSAK1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=4
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=4
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>p2 [completeness=complete] [topology=circular] [gcode=4] [plasmid-name=pOSAK1]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,83 @@
+LOCUS       p2                      1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid pOSAK1, complete sequence.
+ACCESSION   p2
+VERSION     p2
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 13:08:00
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="pOSAK1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=4
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=4
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,13 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region p2 1 1330
+p2	Bakta	region	1	1330	.	+	.	ID=p2;Name=p2;Is_circular=true
+p2	Prodigal	gene	413	736	.	+	.	ID=IHHALP_00005_gene;locus_tag=IHHALP_00005
+p2	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein;Parent=IHHALP_00005_gene;inference=ab initio prediction:Prodigal:2.6
+p2	Prodigal	gene	971	1471	.	-	.	ID=IHHALP_00010_gene;locus_tag=IHHALP_00010
+p2	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein;Parent=IHHALP_00010_gene;inference=ab initio prediction:Prodigal:2.6
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+p2	413	736	+	IHHALP_00005	12.1	10.4		
+p2	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 4
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "p2",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "p2",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "p2",
+            "description": "[completeness=complete] [topology=circular] [gcode=4] [plasmid-name=pOSAK1]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "pOSAK1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 13:07:59",
+        "end": "2022-08-22 13:08:00"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,91 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+predict tRNAs...
+	found: 0
+predict tmRNAs...
+	found: 0
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+		user protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 16
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/12/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:01 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+p2	cds	413	736	+	IHHALP_00005		hypothetical protein	
+p2	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_4/TEST_4.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_4/TEST_4.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_5/TEST_5.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_5/TEST_5.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,55 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+skip rRNA prediction...
+skip ncRNA prediction...
+skip ncRNA region prediction...
+skip CRISPR array prediction...
+skip CDS prediction...
+skip sORF prediction...
+skip gap annotation...
+skip oriC/T annotation...
+apply feature overlap filters...
+select features and create locus tags...
+selected: 0
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 0.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 0
+	  hypotheticals: 0
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/14/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/TEST_5/TEST_5.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/TEST_5/TEST_5.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 0.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 0
+hypotheticals: 0
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/prodigal.tf
Binary file test-data/prodigal.tf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/replicons.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/replicons.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,3 @@
+NC_002695.2	c1	c	c	-
+NC_002128.1	p1	plasmid	c	pO157
+NC_002127.1	p2	p	c	pOSAK1
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3f
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3i
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3m
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3p
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-mutation.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-mutation.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	accession_version	mutation_position	mutation_symbol	class	subclass	mutated_protein_name
+Escherichia	WP_000019358.1	12	soxS_A12S	MULTIDRUG	AMPICILLIN/CHLORAMPHENICOL/QUINOLONE/RIFAMPIN/TETRACYCLINE	Escherichia_ampicillin/chloramphenicol/quinolone/rifampin/tetracycline_resistant_SoxS
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-suppress
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-suppress	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	protein_accession	protein_gi
+Escherichia	AAA21095.1	151858
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-susceptible.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-susceptible.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	gene_symbol	accession_version	resistance_cutoff	class	subclass	resistance_protein_name
+Streptococcus_pneumoniae	pbp1a	WP_001040013.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pdb
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pdb has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.phr
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.phr has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pin
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pin has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.psq
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.psq has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.ptf
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.ptf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pto
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pto has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ndb
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ndb has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nhr
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nhr has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nin
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nin has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.not
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.not has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nsq
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nsq has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ntf
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ntf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nto
Binary file test-data/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nto has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/database_format_version.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/database_format_version.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+3.10.16
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/fam.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/fam.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1744 @@
+#node_id	parent_node_id	gene_symbol	hmm_id	hmm_tc1	hmm_tc2	blastrule_complete_ident	blastrule_complete_wp_coverage	blastrule_complete_br_coverage	blastrule_partial_ident	blastrule_partial_wp_coverage	blastrule_partial_br_coverage	reportable	type	subtype	class	subclass	family_name
+ACID	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	ACID			
+ALL		-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0					
+AME	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			aminoglycoside modifying enzymes
+AMR	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			
+BIOCIDE	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	BIOCIDE			
+BcII	bla-B1	bla2	NF033095.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BcII family subclass B1 metallo-beta-lactamase
+CDF_efflux	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CDF family cation efflux transporter
+CMY2-MIR-ACT-EC	bla-C	ampC	NF012173.1	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CMY2/MIR/ACT/EC family class C beta-lactamase
+EFFLUX	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			efflux
+HARLDQ_not_B3	bla-B3	-	NF000405.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			HARLDQ motif MBL-fold protein
+HEAT	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	HEAT			
+HTH_5	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			ArsR/SmtB family metalloregulatory transcriptional repressor
+LHR_hdeD	HEAT	hdeD-GI	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	STRESS	HEAT			heat resistance membrane protein HdeD-GI
+LHR_hsp20A	HEAT	hsp20	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	HEAT			small heat shock protein sHSP20
+LHR_hsp20B	HEAT	shsP	-	0.00	0.00	93.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	HEAT			small heat shock protein sHSP20-GI
+LHR_kefB	HEAT	kefB-GI	-	0.00	0.00	86.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance system K+/H+ antiporter KefB-GI
+LHR_psiE	HEAT	psi-GI	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein PsiE-GI
+LHR_trx	HEAT	trxLHR	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance system thioredoxin Trx-GI
+LHR_yfdX1	HEAT	yfdX1	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein YfdX1
+LHR_yfdX2	HEAT	yfdX2	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein YfdX2
+MATE_efflux	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux MATE transporter
+METAL-RND-IM	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			cation efflux RND transporter permease subunit
+METAL	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			Metal Resistance
+MFS_efflux_CHL	MFS_efflux	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter
+MFS_efflux_qac	BIOCIDE	qac	NF000089.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacA/B family quaternary ammonium compound efflux MFS transporter
+MFS_efflux	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux MFS transporter
+MerP_Gneg	merP	merP	TIGR02052.1	92.55	92.55	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system periplasmic binding protein MerP
+OM_sidero	VIRULENCE_Ecoli	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			TonB-dependent siderophore receptor
+P-type_ATPase	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			metal-translocating P-type ATPase
+PERI-SENSOR	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			periplasmic heavy metal sensor
+RESPONSE_REG	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			DNA-binding response regulator
+RND-IM	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux RND transporter permease subunit
+RND-OM	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux transporter outer membrane subunit
+RND-peri	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux RND transporter periplasmic adaptor subunit
+SMR_efflux_bcrB	SMR_efflux	bcrB	NF033469.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	quaternary ammonium compound efflux SMR transporter BcrB
+SMR_efflux_bcrC	SMR_efflux	bcrC	NF033470.1	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	quaternary ammonium compound efflux SMR transporter BcrC
+SMR_efflux_emrE	SMR_efflux	emrE	NF000336.1	195.00	195.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux SMR transporter EmrE
+SMR_efflux_smr	SMR_efflux	smr	NF000280.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	multidrug efflux SMR transporter Smr
+SMR_efflux	BIOCIDE	qac	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	SMR family small multidrug resistance efflux protein
+SMR_qac_int	SMR_efflux	qac	NF033137.0	188.00	188.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	Qac family quaternary ammonium compound efflux SMR transporter
+SMR_qac_pB8	SMR_efflux	qac	NF000148.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	Qac-pB8 family quaternary ammonium compound efflux SMR transporter
+STRESS	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	STRESS			
+VIRULENCE_Cdiff	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Cperf	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Ecoli	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Saur	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+aac(2')-IIa	aac(2')	aac(2')-IIa	NF000100.2	510.00	510.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	kasugamycin N-acetyltransferase AAC(2')-IIa
+aac(2')-IIb	aac(2')	aac(2')-IIb	NF033472.1	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	kasugamycin N-acetyltransferase AAC(2')-IIb
+aac(2')-Ia	aac(2')	aac(2')-Ia	NF000108.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ia
+aac(2')-Ib	aac(2')	aac(2')-Ib	NF000010.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ib
+aac(2')-Ic	aac(2')	aac(2')-Ic	NF000034.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ic
+aac(2')-Id	aac(2')	aac(2')-Id	NF000042.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Id
+aac(2')-Ie	aac(2')	aac(2')-Ie	NF000054.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ie
+aac(2')	aac	aac(2')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 2'-N-acetyltransferase
+aac(3)-IIIa	aac(3)	aac(3)-IIIa	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	40.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIa
+aac(3)-IIIb	aac(3)	aac(3)-IIIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIb
+aac(3)-IIIc	aac(3)	aac(3)-IIIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIc
+aac(3)-IIa	aac(3)-II	aac(3)-IIa	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIa
+aac(3)-IIb	aac(3)-II	aac(3)-IIb	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIb
+aac(3)-IIc	aac(3)-II	aac(3)-IIc	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIc
+aac(3)-IId	aac(3)-II	aac(3)-IId	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IId
+aac(3)-IIe	aac(3)-II	aac(3)-IIe	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIe
+aac(3)-IIg	aac(3)-II	aac(3)-IIg	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIg
+aac(3)-II	aac(3)	aac(3)-II	NF033080.0	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-II family aminoglycoside N-acetyltransferase
+aac(3)-IVa	aac(3)_IV_fam	aac(3)-IVa	-	0.00	0.00	98.00	90.00	97.00	99.00	95.00	45.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(3)-IVa
+aac(3)-IVb	aac(3)_IV_fam	aac(3)-IVb	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(3)-IVb
+aac(3)-IXa	aac(3)	aac(3)-IXa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-IXa
+aac(3)-Ia	aac(3)-I	aac(3)-Ia	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ia
+aac(3)-Ib	aac(3)-I	aac(3)-Ib	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ib
+aac(3)-Ic	aac(3)-I	aac(3)-Ic	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ic
+aac(3)-Id	aac(3)-I	aac(3)-Id	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Id
+aac(3)-If	aac(3)-I	aac(3)-If	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-If
+aac(3)-Ig	aac(3)-I	aac(3)-Ig	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ig
+aac(3)-Ih	aac(3)-I	aac(3)-Ih	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	1	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ih
+aac(3)-Ii	aac(3)-I	aac(3)-Ii	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ii
+aac(3)-I	aac(3)_gen	aac(3)-I	NF033083.0	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-I family aminoglycoside 3-N-acetyltransferase
+aac(3)-VIII	aac(3)	aac(3)-VIII	NF033180.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-VIII
+aac(3)-VIIa	aac(3)	aac(3)-VIIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-VIIa
+aac(3)-VIa	aac(3)	aac(3)-VIa	NF033612.0	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-VIa
+aac(3)-XI	aac(3)_gen	aac(3)-XI	NF000482.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-XI
+aac(3)-Xa	aac(3)	aac(3)-Xa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-Xa
+aac(3)_IV_fam	aac(3)_gen	aac(3)-IV	NF033081.0	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-IV family aminoglycoside N-acetyltransferase
+aac(3)_gen	aac	aac(3)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside 3-N-acetyltransferase
+aac(3)	aac(3)_gen	aac(3)	NF033082.0	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside 3-N-acetyltransferase
+aac(6')-29	aac(6')	aac(6')-29	NF000050.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-29
+aac(6')-30	aac(6')	aac(6')-30	NF033077.0	255.00	255.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-30
+aac(6')-31	aac(6')-set_A	aac(6')-31	NF000118.3	385.00	385.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-31
+aac(6')-35	aac(6')	aac(6')-35	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-35
+aac(6')-III	aac(6')	aac(6')-III	NF038102.1	305.00	305.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	tobramycin N-acetyltransferase AAC(6')-III
+aac(6')-IIa	aac(6')-II	aac(6')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-IIa
+aac(6')-IIc	aac(6')-II	aac(6')-IIc	NF000135.2	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-IIc
+aac(6')-IId	aac(6')-Ib-G	aac(6')-IId	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-IId
+aac(6')-II	aac(6')-set_A	aac(6')-II	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-II family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Iad	aac(6')-I	aac(6')-Iad	NF000115.2	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Iad
+aac(6')-Iag	aac(6')	aacA48	NF033130.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-Iag
+aac(6')-Iak	aac(6')_Steno	aac(6')-Iak	NF000497.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Iak
+aac(6')-Ian	aac(6')-I	aac(6')-Ian	NF000431.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aac(6')-Ia	aac(6')_Ia_fam	aac(6')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-Ia
+aac(6')-Ib''	aac(6')-Ib-KT	aac(6')-Ib''	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ib''
+aac(6')-Ib'	aac(6')-Ib-G	aac(6')-Ib'	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(6')-Ib'
+aac(6')-Ib-AGKT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-AKT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-D181Y	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-G	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-KT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-K	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-W104R	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-cr	aac(6')-Ib	aac(6')-Ib-cr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr
+aac(6')-Ib-generic	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib11	aac(6')-Ib-AGKT	aac(6')-Ib11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ib11
+aac(6')-Ib	aac(6')-set_A	aac(6')-Ib	NF033074.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Id	aac(6')-I	aac(6')-Id	NF033374.6	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Id
+aac(6')-Ie2	aac(6')-Ie_fam	aac(6')-Ie	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ie
+aac(6')-Ie_fam	aac(6')-I	aac(6')-Ie	NF033693.0	340.00	340.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ie family aminoglycoside N-acetyltransferase
+aac(6')-Ie	aac(6')-Ie_fam	aac(6')-Ie	NF000507.1	450.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ie
+aac(6')-If	aac(6')-I	aac(6')-If	NF000110.2	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-If
+aac(6')-Il	aac(6')-I	aac(6')-Il	NF000158.2	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Il
+aac(6')-Im	aac(6')-I	aac(6')-Im	NF000016.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Im
+aac(6')-Ip	aac(6')_Ia_fam	aac(6')-Ip	NF000486.1	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-Ip
+aac(6')-Iq	aac(6')_Ia_fam	aac(6')-Iq	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-Iq
+aac(6')-Iz	aac(6')_Steno	aac(6')-Iz	NF000138.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Iz
+aac(6')-I	aac(6')	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-I family aminoglycoside 6'-N-acetyltransferase
+aac(6')-set_A	aac(6')	aac(6')	NF012165.0	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')-sk	aac(6')_Strep	aac(6')-kana	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Acine	aac(6')-I	aac(6')-I	NF000224.3	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aac(6')_Entco	aac(6')	aac(6')-I	NF000165.3	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Ia_fam	aac(6')	aac(6')	NF033078.2	265.00	265.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase
+aac(6')_Serra	aac(6')	aac(6')	NF000021.4	310.00	310.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Steno	aac(6')	aac(6')	NF033075.0	290.00	290.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Strep	aac(6')	aac(6')	NF000225.3	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Yersi	aac(6')	aac(6')	NF033076.0	290.00	290.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')	aac	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside 6'-N-acetyltransferase
+aacA-ACI1	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI2	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI3	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI4	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI5	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI6	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI7	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ENT1	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT2	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT3	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT4	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-10	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-13	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-15	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-7	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA10	aac(6')-I	aacA10	NF033151.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-I family aminoglycoside 6'-N-acetyltransferase
+aacA32	aac(6')-set_A	aacA32	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA34	aac(6')	aacA34	NF000123.2	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA34
+aacA37	aac(6')	aacA37	NF000152.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA37
+aacA38	aac(6')-set_A	aacA38	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA38
+aacA40	aac(6')-II	aacA40	NF000048.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA40
+aacA43	aac(6')_Ia_fam	aacA43	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase AacA43
+aacA49	aac(6')_Ia_fam	aacA49	NF033150.1	410.00	410.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase AacA49
+aacA57-2	aacA57	aacA57-2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aacA57	aac(6')-Ian	aacA57	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aacA8	aac(6')-set_A	aacA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA8
+aac	AME	aac	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase
+aad9	ant(9)	aad9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase
+aadA10	ant(3'')-Ia	aadA10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA10
+aadA11	ant(3'')-Ia	aadA11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA11
+aadA12	ant(3'')-Ia	aadA12	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA12
+aadA13	ant(3'')-Ia	aadA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA13
+aadA15	ant(3'')-Ia	aadA15	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA15
+aadA16	ant(3'')-Ia	aadA16	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16
+aadA1bt	aadA1	aadA1bt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1bt
+aadA1	ant(3'')-Ia	aadA1	NF033126.1	587.00	587.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1
+aadA21	ant(3'')-Ia	aadA21	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA21
+aadA22	ant(3'')-Ia	aadA22	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22
+aadA25	ant(3'')-Ia	aadA25	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA25
+aadA27	ant(3'')-II	aadA27	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-II family aminoglycoside nucleotidyltransferase AadA27
+aadA2	ant(3'')-Ia	aadA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2
+aadA31	ant(3'')-Ia	aadA31	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA31
+aadA3	ant(3'')-Ia	aadA3	NF033127.1	595.50	595.50	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA3
+aadA4	aadA_4_5	aadA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA4
+aadA5	aadA_4_5	aadA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5
+aadA6	ant(3'')-Ia	aadA6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA6
+aadA7	ant(3'')-Ia	aadA7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA7
+aadA8	ant(3'')-Ia	aadA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA8
+aadA9	ant(3'')-Ia	aadA9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA9
+aadA_4_5	ant(3'')-Ia	aadA_4_5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA
+aadE-Cc	ant(6)	aadE-Cc	NF033221.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadE-Cc
+aadE	ant(6)	aadE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadE
+aadK	ant(6)	aadK	NF000312.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadK
+aadS_fam	ant6_gen	aadS	NF033387.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	AadS family aminoglycoside 6-adenylyltransferase
+aadS	aadS_fam	aadS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadS
+aafA	VIRULENCE_Ecoli	aafA	-	0.00	0.00	76.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II major subunit AafA
+aafB	VIRULENCE_Ecoli	aafB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II minor subunit AafB
+aafC	VIRULENCE_Ecoli	aafC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II usher protein AafC
+aafD	VIRULENCE_Ecoli	aafD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II chaperone AafD
+aaiC	VIRULENCE_Ecoli	aaiC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type VI secretion system protein AaiC/Hcp2
+aap	VIRULENCE_Ecoli	aap	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			dispersin Aap
+aar	VIRULENCE_Ecoli	aar	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AggR-activated transcriptional regulator Aar
+aatA	VIRULENCE_Ecoli	aatA	-	0.00	0.00	86.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			dispersin export ABC transporter outer membrane protein AatA
+abaF	MFS_efflux	abaF	-	0.00	0.00	71.00	90.00	90.00	96.00	84.00	25.00	1	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin efflux MFS transporter AbaF
+abc-f	AMR	abc-f	NF000355.3	450.00	440.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein
+abcf-produ	abc-f	abc-f	NF000171.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection protein
+acr3_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	Acr3 family arsenite efflux transporter
+acr3	acr3_gen	acr3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter Acr3
+acrF	RND-IM	acrF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit AcrF
+adeC-K-oprM	RND-OM	adeC	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor
+adeC	adeC-K-oprM	adeC	NF033142.1	975.00	975.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter AdeABC outer membrane channel subunit AdeC
+adeD	RND-peri	adeD	-	0.00	0.00	86.00	90.00	90.00	96.00	88.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit AdeD
+adeE	RND-IM	adeE	-	0.00	0.00	85.00	90.00	90.00	88.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit AdeE
+afaC	VIRULENCE_Ecoli	afaC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AfaC-I/III family usher protein
+agg3A	VIRULENCE_Ecoli	agg3A	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 major subunit Agg3A
+agg3B	VIRULENCE_Ecoli	agg3B	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 minor subunit Agg3B
+agg3C	VIRULENCE_Ecoli	agg3C	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 usher protein Agg3C
+agg3D	VIRULENCE_Ecoli	agg3D	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 chaperone Agg3D
+agg4A	VIRULENCE_Ecoli	agg4A	-	0.00	0.00	80.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 4 major subunit Agg4A/HdaA
+agg4D	VIRULENCE_Ecoli	agg4D	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 4 chaperone Agg4D/HdaD
+agg5A	VIRULENCE_Ecoli	agg5A	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria V major subunit Agg5A
+aggA	VIRULENCE_Ecoli	aggA	-	0.00	0.00	60.00	80.00	90.00	70.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I major subunit AggA
+aggB	VIRULENCE_Ecoli	aggB	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I minor subunit AggB
+aggC	VIRULENCE_Ecoli	aggC	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I usher protein AggC
+aggD	VIRULENCE_Ecoli	aggD	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I chaperone AggD
+aggR	VIRULENCE_Ecoli	aggR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence transcriptional regulator AggR
+air	VIRULENCE_Ecoli	air	-	0.00	0.00	85.00	80.00	80.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			inverse autotransporter adhesin EaeX/Air
+almG	AMR	almG	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	COLISTIN	COLISTIN	glycine--lipid A transferase AlmG
+alpha-1	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha-2	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha-5	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	NU	intimin type nu
+alpha-6	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ZETA	intimin type zeta
+alpha-8	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha	eae_typing_E._coli	eae	NF033639.1	2050.00	2050.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+amvA	MFS_efflux	amvA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter AmvA
+ant(2'')-Ia	ant(2'')	ant(2'')-Ia	NF000064.3	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(2'')-Ia
+ant(2'')	ant	ant(2'')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	ANT(2'') family aminoglycoside adenylyltransferase
+ant(3'')-IIa	ant(3'')-II	ant(3'')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIa
+ant(3'')-IIb	ant(3'')-II	ant(3'')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIb
+ant(3'')-IIc	ant(3'')-II	ant(3'')-IIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIc
+ant(3'')-II	ant	ant(3'')-II	NF033220.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-II family aminoglycoside nucleotidyltransferase
+ant(3'')-Ia	ant(3'')-I	ant(3'')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA
+ant(3'')-Ib	ant	ant(3'')-Ib	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ib
+ant(3'')-Ih	ant(3'')-I	ant(3'')-Ih	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ih
+ant(3'')-Ij	ant(3'')-I	ant(3'')-Ij	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ij
+ant(3'')-I	ant	ant(3'')	NF012157.0	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-I family aminoglycoside nucleotidyltransferase
+ant(4')-IIa	ant(4')-II	ant(4')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(4')-IIa
+ant(4')-IIb	ant(4')-II	ant(4')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(4')-IIb
+ant(4')-II	ant(4')	ant(4')	NF028535.0	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4')-II family aminoglycoside nucleotidyltransferase
+ant(4')-Ia	ant(4')-I	aadD1	NF000181.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
+ant(4')-Ib	ant(4')-I	aadD2	NF000079.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ib
+ant(4')-Ic	ant(4')-I	ant(4')-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ic
+ant(4')-I	ant(4')	ant(4')-I	NF033061.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4')-I family aminoglycoside nucleotidyltransferase
+ant(4')	ant	ant(4')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4') family aminoglycoside nucleotidyltransferase
+ant(6)-Ia	ant(6)	ant(6)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ia
+ant(6)-Ib	ant(6)	ant(6)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ib
+ant(6)-Ic	ant(6)	ant(6)-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ic
+ant(6)	ant6_gen	ant(6)	NF033084.2	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-nucleotidyltransferase
+ant(9)-Ia	ant(9)	ant(9)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside nucleotidyltransferase ANT(9)-Ia
+ant(9)-Ib	ant(9)	ant(9)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside nucleotidyltransferase ANT(9)-Ib
+ant(9)	ant	ant(9)	NF012212.0	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	ANT(9) family aminoglycoside nucleotidyltransferase
+ant6_gen	ant	ant(6)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase
+ant	AME	ant	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside nucleotidyltransferase
+aph(2'')-IIIa	aph(2'')	aph(2'')-IIIa	NF000044.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IIIa
+aph(2'')-IIa	aph(2'')	aph(2'')-IIa	NF000015.3	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IIa
+aph(2'')-IVa	aph-Ie-IVa	aph(2'')-IVa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IVa
+aph(2'')-I_a_f_h	aph(2'')	aph(2'')-I	NF033692.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-Ia/If/Ih family aminoglycoside O-phosphotransferase
+aph(2'')-Ia	aph(2'')-I_a_f_h	aph(2'')-Ia	NF000508.1	600.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ia
+aph(2'')-Ie	aph-Ie-IVa	aph(2'')-Ie	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ie
+aph(2'')-If2	aph(2'')-I_a_f_h	aph(2'')-If2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-If2
+aph(2'')-If_h	aph(2'')-I_a_f_h	aph(2'')-I	NF000498.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-If/Ih family aminoglycoside O-phosphotransferase
+aph(2'')-If	aph(2'')-If_h	aph(2'')-If	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-If
+aph(2'')-Ig	aph(2'')	aph(2'')-Ig	NF000132.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ig
+aph(2'')-Ih	aph(2'')-If_h	aph(2'')-Ih	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ih
+aph(2'')	aph	aph(2'')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'') family aminoglycoside O-phosphotransferase
+aph(3'')-Ia	aph(3'')	aph(3'')-Ia	NF032894.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ia
+aph(3'')-Ib	aph(3'')	aph(3'')-Ib	NF032895.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ib
+aph(3'')-Ic	aph(3'')	aph(3'')-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ic
+aph(3'')	aph	aph(3'')	NF032896.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(3'') family aminoglycoside O-phosphotransferase
+aph(3')-II-therm	aph(3')-II	aph(3')-II	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3')-II family aminoglycoside O-phosphotransferase
+aph(3')-IIIa	aph(3')	aph(3')-IIIa	NF033064.0	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIIa
+aph(3')-IIa	aph(3')-II	aph(3')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIa
+aph(3')-IIb	aph(3')-II	aph(3')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIb
+aph(3')-IIc	aph(3')-II	aph(3')-IIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIc
+aph(3')-IId	aph(3')-II	aph(3')-IId	-	0.00	0.00	88.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IId
+aph(3')-II	aph(3')	aph(3')-II	NF032898.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3')-II family aminoglycoside O-phosphotransferase
+aph(3')-IVa	aph(3')	aph(3')-IVa	NF033065.0	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IVa
+aph(3')-IX	aph(3')	aph(3')-IX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3') family aminoglycoside O-phosphotransferase
+aph(3')-Ia	aph(3')-I	aph(3')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Ia
+aph(3')-Ib	aph(3')-I	aph(3')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Ib
+aph(3')-Id	aph(3')-I	aph(3')-Id	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Id
+aph(3')-I	aph(3')	aph(3')-I	NF033059.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN	APH(3')-I family aminoglycoside O-phosphotransferase
+aph(3')-VIIIa	aph(3')-VIII	aph(3')-VIIIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIIa
+aph(3')-VIIIb	aph(3')-VIII	aph(3')-VIIIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIIb
+aph(3')-VIII	aph(3')	aph(3')-VIII	NF033066.0	520.00	520.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIII
+aph(3')-VIIa	aph(3')	aph(3')-VIIa	NF033067.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIa
+aph(3')-VIa	aph(3')-VI	aph(3')-VIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIa
+aph(3')-VIb	aph(3')-VI	aph(3')-VIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIb
+aph(3')-VI	aph(3')	aph(3')-VI	NF033062.0	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	APH(3')-VI family aminoglycoside O-phosphotransferase
+aph(3')-Va	aph(3')-V	aph(3')-Va	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Va
+aph(3')-Vb	aph(3')-V	aph(3')-Vb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Vb
+aph(3')-Vc	aph(3')-V	aph(3')-Vc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Vc
+aph(3')-V	aph(3')	aph(3')-V	NF032897.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(3')-V family aminoglycoside O-phosphotransferase
+aph(3')-XV	aph(3')	aph(3')-XV	NF033063.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-XV
+aph(3')	aph	aph(3')	NF033068.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(3') family aminoglycoside O-phosphotransferase
+aph(4)-Ia	aph(4)-I	aph(4)-Ia	NF000107.2	725.00	725.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	aminoglycoside O-phosphotransferase APH(4)-Ia
+aph(4)-I	aph	aph(4)-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	APH(4)-I family aminoglycoside O-phosphotransferase
+aph(6)-Ia	aph(6)-I	aph(6)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ia
+aph(6)-Ib	aph(6)-I	aph(6)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ib
+aph(6)-Ic_gen	aph(6)-I	aph(6)-I	NF033614.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(6)-I family aminoglycoside O-phosphotransferase
+aph(6)-Ic	aph(6)-Ic_gen	aph(6)-Ic	NF000011.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ic
+aph(6)-Id	aph(6)-I	aph(6)-Id	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Id
+aph(6)-I	aph	aph(6)-I	NF012171.0	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(6)-I family aminoglycoside O-phosphotransferase
+aph(6)-Smalt	aph(6)-I	aph(6)	NF012160.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(6) family putative aminoglycoside O-phosphotransferase
+aph(7'')-Ia	aph	aph(7'')-Ia	NF000137.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	aminoglycoside O-phosphotransferase APH(7'')-Ia
+aph(9)-Ia	aph(9)-I	aph(9)-Ia	NF000052.4	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside O-phosphotransferase APH(9)-Ia
+aph(9)-Ib	aph(9)-I	aph(9)-Ib	NF000029.2	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside O-phosphotransferase APH(9)-Ib
+aph(9)-I	aph	aph(9)-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	APH(9)-I family aminoglycoside O-phosphotransferase
+aph-Ie-IVa	aph(2'')	aph(2'')	NF000076.3	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-Ie/IVa family aminoglycoside O-phosphotransferase
+aphA16	aph(3')	aphA16	NF033112.0	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	APH(3') family aminoglycoside O-phosphotransferase AphA16
+aph	AME	aph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase
+apmA	AMR	apmA	NF000084.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN	aminocyclitol acetyltransferase ApmA
+ariR	ACID	ymgB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	ACID			biofilm/acid-resistance regulator AriR
+armA	rmt	armA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+arr-2b	arr	arr	NF000066.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase
+arr-3	arr	arr-3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-3
+arr-6	arr	arr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-6
+arr-Msmeg	arr	arr	NF000318.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-2b
+arr	AMR	arr	NF033144.1	130.00	130.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase
+arsA	METAL	arsA	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter ATPase subunit ArsA
+arsB_Lm	acr3_gen	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_R773	arsB	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pI258	arsB	arsB	NF033877.0	760.00	760.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pKW301	arsB	arsB	-	0.00	0.00	96.00	90.00	90.00	98.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pYV	arsB	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB	METAL	arsB	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsC_gluta	METAL	arsC	NF007456.1	242.00	242.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENATE	glutaredoxin-dependent arsenate reductase
+arsC_thio	METAL	arsC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENATE	thioredoxin-dependent arsenate reductase
+arsD_like	METAL	arsD2	-	0.00	0.00	70.00	90.00	90.00	80.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter metallochaperone ArsD-related protein
+arsD	METAL	arsD	NF033727.1	95.00	95.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter metallochaperone ArsD
+arsH	METAL	arsH	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsenic resistance NADPH-dependent reductase ArsH
+arsN1a	arsN_gen	arsN1	NF040503.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsinothricin resistance N-acetyltransferase ArsN1 family A
+arsN1b	arsN_gen	arsN1	NF040504.1	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsinothricin resistance N-acetyltransferase ArsN1 family B
+arsN2	arsN_gen	arsN2	NF040501.1	125.00	125.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsenic resistance N-acetyltransferase ArsN2
+arsN_gen	METAL	arsN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	ArsN family N-acetyltransferase
+arsP	METAL	arsP	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ORGANOARSENIC	organoarsenical efflux permease ArsP
+arsR_K-12	arsR	arsR	-	0.00	0.00	87.00	90.00	90.00	95.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_LGI2_1	arsR	arsR	-	0.00	0.00	87.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_LGI2_2	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_R46	arsR	arsR	-	0.00	0.00	88.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_Tn7102	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pI258	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pKW301	arsR_R46	arsR	-	0.00	0.00	88.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pSX267	arsR	arsR	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pYV	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR	HTH_5	arsR	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+asr	ACID	asr	NF033636.1	50.00	40.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	ACID			acid resistance repetitive basic protein Asr
+astA	VIRULENCE_Ecoli	astA	NF033646.1	80.00	80.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin EAST1
+aur	VIRULENCE_Saur	aur	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			zinc metalloproteinase aureolysin
+auto_tox	VIRULENCE_Ecoli	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			SPATE family serine protease autotransporter
+bcrA_Lm	AMR	bcrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BACITRACIN	BACITRACIN	bacitracin resistance ABC transporter ATP-binding subunit BcrA
+becA	VIRULENCE_Cperf	becA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin enzymatic subunit BecA
+becB	VIRULENCE_Cperf	becB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin binding subunit BecB
+bepC	RND-OM	bepC	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane subunit BepC
+bepD	RND-peri	bepD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit BepD
+bepE	RND-IM	bepE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit BepE
+bepF	RND-peri	bepF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit BepF
+bepG	RND-IM	bepG	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit BepG
+beta-1	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+beta-2	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+beta-4	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	KAPPA	intimin type kappa
+beta	eae_typing_E._coli	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+bexA	MATE_efflux	bexA	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MATE transporter BexA
+bfpA	pilus	bfpA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bundle-forming pilus major subunit BfpA
+bin_CdtA	VIRULENCE_Cdiff	cdtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin enzymatic subunit CdtA
+bin_CdtB	VIRULENCE_Cdiff	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin binding subunit CdtB
+bind_CopB	multi_Cu_ox	copB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	copper-binding protein CopB
+bla-A2	bla-A	bla	NF012099.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase, subclass A2
+bla-A_Chryseo	bla-A2	bla-A	NF000447.2	510.00	510.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CGA/CIA family class A beta-lactamase
+bla-A_carba	bla-A	bla	NF000538.0	410.00	410.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	carbapenem-hydrolyzing class A beta-lactamase
+bla-A_firm	bla-A	bla	NF012167.0	427.00	427.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+bla-A	bla	bla	NF033103.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+bla-B1-FLAV	blaB-IND-MUS	bla-B1-FLAV	NF000450.2	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B1 metallo-beta-lactamase
+bla-B1	bla-B	bla	NF033088.2	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B1 metallo-beta-lactamase
+bla-B2	bla-B	bla	NF033087.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B2 metallo-beta-lactamase
+bla-B3-CAR	bla-B	blaCAR	NF000469.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAR family subclass B3 metallo-beta-lactamase
+bla-B3	bla-B	bla	NF033105.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B3 metallo-beta-lactamase
+bla-B	bla	bla	NF012229.1	100.00	100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	metallo-beta-lactamase
+bla-C	bla	ampC	NF033085.1	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class C beta-lactamase
+bla-D-Gpos	blaOXA	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BPU/BAT/BSU family class D beta-lactamase
+bla-D	bla	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+bla1	bla-A_firm	bla	NF033096.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase Bla1
+bla2a	bla-A	bla2a	NF033099.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	Exo family class A beta-lactamase
+blaAAK	blaSHV-LEN	blaAAK	NF038195.1	655.00	655.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AAK family class A beta-lactamase
+blaACC	bla-C	blaACC	NF000397.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACC family cephalosporin-hydrolyzing class C beta-lactamase
+blaACI	bla-A	blaACI	NF000448.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACI family class A beta-lactamase
+blaACT	CMY2-MIR-ACT-EC	blaACT	NF000385.4	810.00	810.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACT family cephalosporin-hydrolyzing class C beta-lactamase
+blaADC-8_fam	bla-C	blaADC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ADC-like cephalosporin-hydrolyzing class C beta-lactamase
+blaADC	bla-C	blaADC	NF000425.2	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ADC family extended-spectrum class C beta-lactamase
+blaAER	bla-A	blaAER	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AER family class A beta-lactamase
+blaAFM	bla-B1	blaAFM	NF033736.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AFM family subclass B1 metallo-beta-lactamase
+blaAIM	bla-B3	blaAIM	NF000439.2	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AIM family subclass B3 metallo-beta-lactamase
+blaALG11	bla-B3	blaALG11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALG11 family subclass B3 metallo-beta-lactamase
+blaALG6	bla-B3	blaALG6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALG6 family subclass B3 metallo-beta-lactamase
+blaALI	bla-B1	blaALI	NF033582.2	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALI family subclass B1 metallo-beta-lactamase
+blaANA	bla-B1	blaANA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ANA family subclass B1 metallo-beta-lactamase
+blaAQU	blaCMY-FOX	blaAQU	NF033467.0	815.00	815.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AQU family class C beta-lactamase
+blaARL	bla-A	blaARL	NF033386.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ARL family class A beta-lactamase
+blaAST	bla-A	blaAST	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AST family class A beta-lactamase
+blaASU1	bla-A	blaASU1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ASU1 family class A beta-lactamase
+blaAXC	bla-A	blaAXC	NF033929.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AXC family carbapenem-hydrolyzing class A beta-lactamase
+blaA_Mtub	bla-A	blaA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaA
+blaA_Yent	bla-A	blaA	NF033152.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaA
+blaB-IND-MUS	bla-B1	bla	NF012146.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaB/IND/MUS family subclass B1 metallo-beta-lactamase
+blaB3SU1	bla-B3	blaB3SU1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	B3SU1 family subclass B3 metallo-beta-lactamase
+blaB3SU2	bla-B3	blaB3SU2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	B3SU2 family subclass B3 metallo-beta-lactamase
+blaBAT	bla-D-Gpos	blaBAT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BAT family class D beta-lactamase
+blaBBI	bla-A_firm	blaBBI	NF033714.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BBI family class A beta-lactamase
+blaBCL	bla-A_firm	blaBCL	NF033060.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BCL family class A beta-lactamase
+blaBEL	bla-A	blaBEL	NF000398.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BEL family class A extended-spectrum beta-lactamase
+blaBES	bla-A	blaBES	NF000451.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BES family class A beta-lactamase
+blaBIC	bla-A_carba	blaBIC	NF000449.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BIC family carbapenem-hydrolyzing class A beta-lactamase
+blaBJP	bla-B3	blaBJP	NF012140.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BJP family subclass B3 metallo-beta-lactamase
+blaBKC_GPC	bla-A	bla	NF033626.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BKC/GPC family carbapenem-hydrolyzing class A beta-lactamase
+blaBKC	blaBKC_GPC	blaBKC	NF000413.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BKC family carbapenem-hydrolyzing class A beta-lactamase
+blaBPU	bla-D-Gpos	blaBPU	NF012098.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BPU family class D beta-lactamase
+blaBRO	bla-A	blaBRO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BRO family class A beta-lactamase
+blaBSU	bla-D-Gpos	blaBSU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BSU family class D beta-lactamase
+blaBUT	CMY2-MIR-ACT-EC	blaBUT	NF038238.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BUT family class C beta-lactamase
+blaB	blaB-IND-MUS	blaB	NF033107.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BlaB family subclass B1 metallo-beta-lactamase
+blaCAM	blaB-IND-MUS	blaCAM	NF033895.1	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAM family subclass B1 metallo-beta-lactamase
+blaCARB_gen	bla-A	blaCARB	NF000481.1	430.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CARB/PSE/RTG family carbenicillin-hydrolyzing class A beta-lactamase
+blaCARB	blaCARB_gen	blaCARB	NF000188.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CARB family carbenicillin-hydrolyzing class A beta-lactamase
+blaCAU/MBL1b	bla-B3	blaCAU	NF000427.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAU/MBL1b family subclass B3 metallo-beta-lactamase
+blaCBP	bla-A	blaCBP	NF000517.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CBP family penicillin-hydrolyzing class A beta-lactamase
+blaCDD	bla-D	blaCDD	NF033866.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CDD family class D beta-lactamase
+blaCFE	blaCMY	blaCFE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-2 family cephalosporin-hydrolyzing class C beta-lactamase
+blaCGA	bla-A_Chryseo	blaCGA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CGA family class A extended-spectrum beta-lactamase
+blaCIA	bla-A_Chryseo	blaCIA	NF000446.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CIA family class A extended-spectrum beta-lactamase
+blaCKO	bla-A	blaCKO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MAL/CKO family class A beta-lactamase
+blaCMA	blaCrA	blaCMA	NF033700.1	887.00	887.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	CMA family class C beta-lactamase
+blaCME	bla-A2	blaCME	NF000511.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CME family class A extended-spectrum beta-lactamase
+blaCMH	blaACT	blaCMH	NF000419.2	875.00	875.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CMH family class C beta-lactamase
+blaCMY-FOX	bla-C	ampC	NF012172.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FOX/MOX family class C beta-lactamase
+blaCMY	CMY2-MIR-ACT-EC	blaCMY	NF000191.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-2 family class C beta-lactamase
+blaCPS	bla-B3	blaCPS	NF000454.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CPS family subclass B3 metallo-beta-lactamase
+blaCRD3	bla-B3	blaCRD3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRD3 family subclass B3 metallo-beta-lactamase
+blaCRH	bla-A_carba	blaCRH	NF033211.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRH family carbapenem-hydrolyzing class A beta-lactamase
+blaCRP	bla-A_carba	blaCRP	NF040548.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRP family carbapenem-hydrolyzing class A beta-lactamase
+blaCSA	blaCrA	blaCSA	NF033698.1	884.00	884.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	CSA family class C beta-lactamase
+blaCSP	bla-A2	blaCSP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CSP family class A beta-lactamase
+blaCTX-M-151_fam	bla-A	blaCTX-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CTX-M-151 family class A beta-lactamase
+blaCTX-M	bla-A	blaCTX-M	NF033089.1	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CTX-M family class A extended-spectrum beta-lactamase
+blaCVI	bla-B2	blaCVI	NF038046.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CVI family subclass B2 metallo-beta-lactamase
+blaCrA	bla-C	ampC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CrA family class C beta-lactamase
+blaDES	bla-A	blaDES	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	DES family class A beta-lactamase
+blaDHA	bla-C	blaDHA	NF012102.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	DHA family class C beta-lactamase
+blaDHT2	bla-B3	blaDHT2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DHT2 family subclass B3 metallo-beta-lactamase
+blaDIM-SIM-IMP	bla-B1	blaDIM	NF012145.1	288.00	288.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DIM/SIM/IMP family subclass B1 metallo-beta-lactamase
+blaDIM	blaDIM-SIM-IMP	blaDIM	NF000445.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DIM family subclass B1 metallo-beta-lactamase
+blaEAM	bla-B3	blaEAM	NF040470.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EAM family subclass B3 metallo-beta-lactamase
+blaEBR	blaB-IND-MUS	blaEBR	NF000444.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	EBR family subclass B1 metallo-beta-lactamase
+blaECM	bla-B3	blaECM	NF040468.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ECM family subclass B3 metallo-beta-lactamase
+blaECV	bla-B1	blaECV	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ECV family subclass B1 metallo-beta-lactamase
+blaEC	CMY2-MIR-ACT-EC	blaEC	NF000185.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaEC family class C beta-lactamase
+blaEFM	bla-B3	blaEFM	NF040469.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	EFM family subclass B3 metallo-beta-lactamase
+blaELM	bla-B3	blaELM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ELM family subclass B3 metallo-beta-lactamase
+blaERP	bla-A	blaERP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ERP family class A beta-lactamase
+blaESP	bla-B3	blaESP	NF000455.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ESP-1 family subclass B3 metallo-beta-lactamase
+blaEVM	bla-B3	blaEVM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EVM family subclass B3 metallo-beta-lactamase
+blaE	bla-C	blaE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class C beta-lactamase
+blaFAR	bla-A	blaFAR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FAR family class A beta-lactamase
+blaFEZ	bla-B3	blaFEZ	NF000216.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FEZ family subclass B3 metallo-beta-lactamase
+blaFIA	bla-B1	blaFIA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FIA family subclass B1 metallo-beta-lactamase
+blaFIM	bla-B1	blaFIM	NF000437.2	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FIM family subclass B1 metallo-beta-lactamase
+blaFONA	bla-A	blaFONA	NF000323.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FONA family class A beta-lactamase
+blaFOX	blaCMY-FOX	blaFOX	NF000399.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	FOX family cephalosporin-hydrolyzing class C beta-lactamase
+blaFPH	bla-A	blaFPH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FPH family carbapenem-hydrolyzing class A beta-lactamase
+blaFRI	bla-A_carba	blaFRI	NF000428.4	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FRI family carbapenem-hydrolyzing class A beta-lactamase
+blaFTU	bla-A	blaFTU	NF000513.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FTU family class A beta-lactamase
+blaF	bla-A	blaF	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaGES	bla-A	blaGES	NF012103.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	GES family class A beta-lactamase
+blaGIL	bla-A	blaGIL	NF000505.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	GIL family class A beta-lactamase
+blaGIM	blaDIM-SIM-IMP	blaGIM	NF000396.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GIM family subclass B1 metallo-beta-lactamase
+blaGMB	bla-B1	blaGMB	NF038103.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GMB family subclass B1 metallo-beta-lactamase
+blaGOB	bla-B3	blaGOB	NF012101.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GOB family subclass B3 metallo-beta-lactamase
+blaGPC	blaBKC_GPC	blaGPC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GPC family carbapenem-hydrolyzing class A beta-lactamase
+blaGRD23	blaDIM-SIM-IMP	blaGRD23	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GRD23 family subclass B1 metallo-beta-lactamase
+blaGRD33	bla-B3	blaGRD33	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GRD33 family subclass B3 metallo-beta-lactamase
+blaHER	bla-A	blaHER	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HER family class A beta-lactamase
+blaHMB	blaKHM-HMB	blaHMB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMB family subclass B1 metallo-beta-lactamase
+blaIDC	bla-C	blaIDC	NF038069.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	IDC family class C beta-lactamase
+blaIMI	bla-A_carba	blaIMI	NF000400.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IMI family carbapenem-hydrolyzing class A beta-lactamase
+blaIMP	blaDIM-SIM-IMP	blaIMP	NF012147.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IMP family subclass B1 metallo-beta-lactamase
+blaIND	blaB-IND-MUS	blaIND	NF012149.0	430.00	430.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IND family subclass B1 metallo-beta-lactamase
+blaI_gen	AMR	blaI	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactamase repressor
+blaI_of_Z	blaI_gen	blaI	NF000186.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	penicillinase repressor BlaI
+blaJOHN	bla-B1-FLAV	blaJOHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	JOHN family subclass B1 metallo-beta-lactamase
+blaKHM-HMB	blaDIM-SIM-IMP	blaKHM-HMB	NF012148.0	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KHM/HMB family subclass B1 metallo-beta-lactamase
+blaKHM	blaKHM-HMB	blaKHM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KHM family subclass B1 metallo-beta-lactamase
+blaKLUC	blaCTX-M	blaKLUC	NF000452.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	KLUC family class A extended-spectrum beta-lactamase
+blaKPC	bla-A_carba	blaKPC	NF012141.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KPC family carbapenem-hydrolyzing class A beta-lactamase
+blaL1	bla-B3	blaL1	NF033106.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	L1 family subclass B3 metallo-beta-lactamase
+blaL2	bla-A	blaL2	NF000232.1	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	L2 family class A beta-lactamase
+blaLAP	bla-A	blaLAP	NF000383.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LAP family class A beta-lactamase
+blaLAQ	CMY2-MIR-ACT-EC	blaLAQ	NF040478.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LAQ family class C beta-lactamase
+blaLAT	blaCMY	blaLAT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase
+blaLCR_NPS	blaOXA	blaLCR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LCR/NPS family class D beta-lactamase
+blaLCR	blaLCR_NPS	blaLCR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LCR family class D beta-lactamase
+blaLEN	blaSHV-LEN	blaLEN	NF000233.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LEN family class A beta-lactamase
+blaLHK	bla-C	blaLHK	NF033569.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LHK family class C beta-lactamase
+blaLMB	bla-B3	blaLMB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	LMB family subclass B3 metallo-beta-lactamase
+blaLRA-10_fam	bla-C	blaLRA10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA10 family class C beta-lactamase
+blaLRA-12_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA12 family subclass B3 metallo-beta-lactamase
+blaLRA-12	blaLRA-12_fam	blaLRA12	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA12 family subclass B3 metallo-beta-lactamase
+blaLRA-13	bla-C	blaLRA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA13 family bifunctional class D/class C beta-lactamase
+blaLRA-17	blaLRA-12_fam	blaLRA17	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA17 family subclass B3 metallo-beta-lactamase
+blaLRA-18_fam	bla-C	blaLRA18	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA18 family class C beta-lactamase
+blaLRA-19	blaLRA-12_fam	blaLRA19	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA19 family subclass B3 metallo-beta-lactamase
+blaLRA-1	bla-A	blaLRA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA1 family class A beta-lactamase
+blaLRA-2_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA2 family subclass B3 metallo-beta-lactamase
+blaLRA-2	blaLRA-2_fam	blaLRA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA2 family subclass B3 metallo-beta-lactamase
+blaLRA-3_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA3 family subclass B3 metallo-beta-lactamase
+blaLRA-3	blaLRA-3_fam	blaLRA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA3 family subclass B3 metallo-beta-lactamase
+blaLRA-5	bla-A	blaLRA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA5 family class A beta-lactamase
+blaLRA-7	blaLRA-3_fam	blaLRA7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA7 family subclass B3 metallo-beta-lactamase
+blaLRA-8	blaLRA-2_fam	blaLRA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA8 family subclass B3 metallo-beta-lactamase
+blaLRA-9	blaLRA-3_fam	blaLRA9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA9 family subclass B3 metallo-beta-lactamase
+blaLRG	bla-A	blaLRG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	LRG family class A beta-lactamase
+blaLUS	bla-A2	blaLUS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LUS family class A beta-lactamase
+blaLUT	bla-A	blaLUT	NF000324.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	LUT family class A beta-lactamase
+blaL	bla-A	blaL	NF033101.0	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaL family class A beta-lactamase
+blaM-1	blaM	blaM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaMCA	bla-C	blaMCA	NF033406.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MCA family class C beta-lactamase
+blaMIR	blaACT	blaMIR	NF000187.3	882.00	882.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	MIR family cephalosporin-hydrolyzing class C beta-lactamase
+blaMOC	blaMUS-TUS-MOC	blaMOC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	XUS family subclass B1 metallo-beta-lactamase
+blaMOX	blaCMY-FOX	blaMOX	NF000239.3	770.00	770.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-1/MOX family class C beta-lactamase
+blaMSI-1_fam	bla-B3	blaMSI	NF000456.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MSI-1 family subclass B3 metallo-beta-lactamase
+blaMUS-TUS-MOC	blaB-IND-MUS	bla	NF012137.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MUS/TUS/MOC family subclass B1 metallo-beta-lactamase
+blaMUS	blaMUS-TUS-MOC	blaMUS	NF000441.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MUS family subclass B1 metallo-beta-lactamase
+blaMYO	bla-B1	blaMYO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MYO family subclass B1 metallo-beta-lactamase
+blaMYX	bla-B1	blaMYX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MYX family subclass B1 metallo-beta-lactamase
+blaM	bla-A	blaM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaNDM	bla-B1	blaNDM	NF000259.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	NDM family subclass B1 metallo-beta-lactamase
+blaNPS	blaLCR_NPS	blaNPS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	NPS family class D beta-lactamase
+blaOCH	bla-C	blaOCH	NF000264.2	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	OCH family class C extended-spectrum beta-lactamase
+blaOHIO	blaSHV-LEN	blaOHIO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	OHIO family class A beta-lactamase
+blaOKP-A	blaOKP	blaOKP-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-A family class A broad-spectrum beta-lactamase
+blaOKP-B	blaOKP	blaOKP-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-B family class A broad-spectrum beta-lactamase
+blaOKP-C	blaSHV-LEN	blaOKP-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-C family class A broad-spectrum beta-lactamase
+blaOKP-D	blaSHV-LEN	blaOKP-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-D family class A broad-spectrum beta-lactamase
+blaOKP	blaSHV-LEN	blaOKP	NF000265.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP family class A broad-spectrum beta-lactamase
+blaORN	blaPLA-ORN-TER	blaORN	NF038401.1	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ORN family class A beta-lactamase
+blaORR	bla-B1	blaORR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ORR family subclass B1 metallo-beta-lactamase
+blaOXA-1036_fam	blaOXA	blaOXA	NF040529.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-1036 family class D beta-lactamase
+blaOXA-10_fam	blaOXA	blaOXA	NF000386.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-10 family class D beta-lactamase
+blaOXA-114_fam	blaOXA-PR	blaOXA	NF033818.0	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-114 family class D beta-lactamase
+blaOXA-12_fam	blaOXA-PR	blaOXA	NF033702.0	595.00	595.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-12 family class D beta-lactamase
+blaOXA-134_fam	blaOXA	blaOXA	NF000436.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-143_fam	blaOXA	blaOXA	NF000464.2	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-143 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-184_fam	blaOXA_Campy	blaOXA	NF000461.2	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-184 family class D beta-lactamase
+blaOXA-1_fam	blaOXA	blaOXA	NF000388.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-1 family class D beta-lactamase
+blaOXA-211_fam	blaOXA	blaOXA	NF000417.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-213_fam	blaOXA	blaOXA	NF000269.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-213 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-214_fam	blaOXA	blaOXA	NF000418.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-214 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-229_fam	blaOXA	blaOXA	NF000501.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-229 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-22_fam	blaOXA-PR	blaOXA	NF033509.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-22 family class D beta-lactamase
+blaOXA-23_fam	blaOXA	blaOXA	NF000266.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-24_fam	blaOXA	blaOXA	NF000434.2	615.00	615.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-24 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-266_fam	blaOXA	blaOXA	NF033653.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-266 family class D beta-lactamase
+blaOXA-274_fam	blaOXA	blaOXA	NF033648.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-274 family class D beta-lactamase
+blaOXA-286_fam	blaOXA	blaOXA	NF000520.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-286 family class D beta-lactamase
+blaOXA-294_fam	blaOXA	blaOXA	NF038386.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-294 family class D beta-lactamase
+blaOXA-2_fam	blaOXA	blaOXA	NF000267.2	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-2 family class D beta-lactamase
+blaOXA-364_fam	blaOXA-PR	blaOXA	NF033815.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-364 family class D beta-lactamase
+blaOXA-372_fam	blaOXA	blaOXA	NF000415.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-372 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-427_fam	blaOXA-PR	blaOXA	NF038217.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-427 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-42_fam	blaOXA-PR	blaOXA	NF040531.1	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-42 family class D beta-lactamase
+blaOXA-46_fam	blaOXA	blaOXA	NF033104.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-46 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-48_fam	blaOXA	blaOXA	NF000387.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-48 family class D beta-lactamase
+blaOXA-493_fam	blaOXA_Campy	blaOXA	NF000462.2	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-493 family class D beta-lactamase
+blaOXA-50_fam	blaOXA	blaOXA	NF000432.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-51_fam	blaOXA	blaOXA	NF000268.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-542_fam	blaOXA	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-542 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-548_fam	blaOXA	blaOXA	NF040530.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-548 family class D beta-lactamase
+blaOXA-55_fam	blaOXA	blaOXA	NF033667.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-55 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-576_fam	blaOXA_Campy	blaOXA	NF033613.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-576 family class D beta-lactamase
+blaOXA-58_fam	blaOXA	blaOXA	NF000500.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-58 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-5_fam	blaOXA	blaOXA	NF040527.1	585.00	585.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-5 family class D beta-lactamase
+blaOXA-60_fam	blaOXA	blaOXA	NF000395.3	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-61_fam	blaOXA_Campy	blaOXA	NF000435.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-61 family class D beta-lactamase
+blaOXA-62_fam	blaOXA	blaOXA	NF000430.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-62 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-63_fam	blaOXA	blaOXA	NF000429.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-63 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-679_fam	blaOXA	blaOXA	NF038333.1	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-679 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-727_fam	blaOXA	blaOXA	NF033666.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-727 family class D beta-lactamase
+blaOXA-85_fam	blaOXA	blaOXA	NF000502.2	550.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-919_fam	blaOXA-PR	blaOXA	NF038183.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-919 family class D beta-lactamase
+blaOXA-9_fam	blaOXA-PR	blaOXA	NF040532.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-9 family class D beta-lactamase
+blaOXA-PR	bla-D	blaOXA	NF000270.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXA_Campy	blaOXA	blaOXA	NF000463.2	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXA	bla-D	blaOXA	NF012161.0	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXY-1	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-1 family class A extended-spectrum beta-lactamase
+blaOXY-2	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-2 family class A extended-spectrum beta-lactamase
+blaOXY-3	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-3 family class A extended-spectrum beta-lactamase
+blaOXY-4	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-4 family class A extended-spectrum beta-lactamase
+blaOXY-5	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-5 family class A extended-spectrum beta-lactamase
+blaOXY-6	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-6 family class A extended-spectrum beta-lactamase
+blaOXY	bla-A	blaOXY	NF000271.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY family class A extended-spectrum beta-lactamase
+blaPAC	bla-C	blaPAC	NF033159.0	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PAC family class C beta-lactamase
+blaPAD	bla-A	blaPAD	NF040472.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PAD family carbapenem-hydrolyzing class A beta-lactamase
+blaPAM	bla-B3	blaPAM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PAM family subclass B3 metallo-beta-lactamase
+blaPAU	bla-A	blaPAU	NF033867.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PAU family class A beta-lactamase
+blaPDC_gen	bla-C	blaPDC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC family class C beta-lactamase
+blaPDC_var	blaPDC_gen	blaPDC	NF000519.2	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC variant family class C beta-lactamase
+blaPDC	blaPDC_gen	blaPDC	NF000422.6	865.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC family class C beta-lactamase
+blaPEDO-1_fam	bla-B3	blaB3PEDO	NF000457.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-1 family subclass B3 metallo-beta-lactamase
+blaPEDO-2_fam	bla-B3	blaB3PEDO	NF000458.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-2 family subclass B3 metallo-beta-lactamase
+blaPEDO-3_fam	blaB-IND-MUS	blaB1PEDO	NF000453.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-3 family subclass B1 metallo-beta-lactamase
+blaPER	bla-A2	blaPER	NF000389.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PER family class A extended-spectrum beta-lactamase
+blaPFM	blaSFH_gen	blaPFM	NF038003.1	555.00	555.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PFM family subclass B2 metallo-beta-lactamase
+blaPLA-ORN-TER	bla-A	bla	NF000275.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PLA/ORN/TER family class A beta-lactamase
+blaPLA	blaPLA-ORN-TER	blaPLA	NF038398.1	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PLA family class A beta-lactamase
+blaPLN	bla-B3	blaPLN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PLN family subclass B3 metallo-beta-lactamase
+blaPME	bla-A	blaPME	NF000414.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PME family class A beta-lactamase
+blaPNGM	bla-B	blaPNGM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PNGM family subclass B3-like metallo-beta-lactamase
+blaPOM	bla-B3	blaPOM	NF000438.2	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	POM family subclass B3 metallo-beta-lactamase
+blaPSE	blaCARB_gen	blaPSE	NF000480.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PSE family carbenicillin-hydrolyzing class A beta-lactamase
+blaPST	blaDIM-SIM-IMP	blaPST	NF033584.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PST family subclass B1 metallo-beta-lactamase
+blaPSV	bla-A	blaPSV	NF033174.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PSV family class A beta-lactamase
+blaP	bla-A_firm	blaP	NF012156.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaP
+blaR1-2	blaR1	blaR1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactam sensor/signal transducer BlaR1
+blaR1_gen	AMR	blaR1	NF000326.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaR1 family beta-lactam sensor/signal transducer
+blaR1	blaR1_gen	blaR1	NF033108.1	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactam sensor/signal transducer BlaR1
+blaR39	bla-A	blaR39	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaRAA	bla-A2	blaRAA	NF040467.1	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RAA family extended-spectrum beta-lactamase
+blaRAHN	bla-A	blaRAHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RAHN family class A beta-lactamase
+blaRCP	bla-A	blaRCP	NF033466.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RCP family class A beta-lactamase
+blaRHO	bla-C	blaRHO	NF033575.1	825.00	825.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RHO family class C beta-lactamase
+blaROB	bla-A	blaROB	NF033568.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ROB family class A beta-lactamase
+blaRSA1	bla-A	blaRSA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RSA1 family class A beta-lactamase
+blaRSA2	bla-A	blaRSA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	RSA2 family carbapenem-hydrolyzing class A beta-lactamase
+blaRSC1	bla-C	blaRSC1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RSC1 family class C beta-lactamase
+blaRSD1	blaOXA	blaRSD1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RSD1 family class D beta-lactamase
+blaRSD2	blaOXA	blaRSD2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RSD2 family class D beta-lactamase
+blaRTG	blaCARB_gen	blaRTG	NF000284.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RTG family carbenicillin-hydrolyzing class A beta-lactamase
+blaRUB	bla-A	blaRUB	NF033204.1	635.00	635.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RUB family class A broad-spectrum beta-lactamase
+blaRm3	bla-B3	blaRm3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B3 metallo-beta-lactamase Rm3
+blaSCO	bla-A	blaSCO	NF000327.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SCO family class A beta-lactamase
+blaSED	bla-A	blaSED	NF000328.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SED family class A beta-lactamase
+blaSFC	bla-A_carba	blaSFC	NF040547.1	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SFC family carbapenem-hydrolyzing class A beta-lactamase
+blaSFDC	CMY2-MIR-ACT-EC	blaSFDC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	SFDC family class C beta-lactamase
+blaSFH_gen	bla-B2	bla	NF012225.0	440.00	440.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SFH-related subclass B2 metallo-beta-lactamase
+blaSFH	blaSFH_gen	blaSFH	NF012224.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SFH family subclass B2 metallo-beta-lactamase
+blaSGM	bla-A	blaSGM	NF000512.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SGM family class A beta-lactamase
+blaSHN	bla-B1	blaSHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SHN family subclass B1 metallo-beta-lactamase
+blaSHV-LEN	bla-A	blaSHV	NF012143.0	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHV/LEN/OKP family class A beta-lactamase
+blaSHV	blaSHV-LEN	blaSHV	NF000285.3	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHV family class A beta-lactamase
+blaSHW	blaDIM-SIM-IMP	blaSHW	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHW family subclass B1 metallo-beta-lactamase
+blaSIM	blaDIM-SIM-IMP	blaSIM	NF000426.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SIM family subclass B1 metallo-beta-lactamase
+blaSMB	bla-B3	blaSMB	NF000287.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SMB-1 family subclass B3 metallo-beta-lactamase
+blaSME	bla-A_carba	blaSME	NF012142.0	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SME family carbapenem-hydrolyzing class A beta-lactamase
+blaSPG-1_fam	bla-B3	blaSPG	NF000459.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPG-1 family subclass B3 metallo-beta-lactamase
+blaSPM	bla-B1	blaSPM	NF012150.3	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPM family subclass B1 metallo-beta-lactamase
+blaSPN79	bla-B1	blaSPN79	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPN79 family subclass B1 metallo-beta-lactamase
+blaSPR	HARLDQ_not_B3	blaSPR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SPR family putative metallo-beta-lactamase
+blaSPS	bla-B1	blaSPS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPS family subclass B1 metallo-beta-lactamase
+blaSRT	bla-C	blaSRT	NF000423.2	860.00	860.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	SRT/SST family class C beta-lactamase
+blaSTA	bla-B1	blaSTA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	STA family subclass B1 metallo-beta-lactamase
+blaS	bla-A	blaS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaTEM	bla-A	blaTEM	NF000531.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TEM family class A beta-lactamase
+blaTER	blaPLA-ORN-TER	blaTER	NF038400.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TER family class A beta-lactamase
+blaTHIN-B	blaTHIN	blaTHIN-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B3 metallo-beta-lactamase THIN-B
+blaTHIN	bla-B3	blaTHIN	NF000440.2	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	THIN family subclass B3 metallo-beta-lactamase
+blaTLA2	bla-A2	tla2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TLA2 family class A extended-spectrum beta-lactamase
+blaTLA	bla-A2	blaTLA	NF000298.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TLA family class A extended-spectrum beta-lactamase
+blaTMB	blaDIM-SIM-IMP	blaTMB	NF000443.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TMB family subclass B1 metallo-beta-lactamase
+blaTRU	blaCMY-FOX	blaTRU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TRU family class C beta-lactamase
+blaTTU	blaDIM-SIM-IMP	blaTTU	NF033585.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TTU family subclass B1 metallo-beta-lactamase
+blaTUS	blaMUS-TUS-MOC	blaTUS	NF000442.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TUS family subclass B1 metallo-beta-lactamase
+blaVAM	bla-B1	blaVAM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VAM family subclass B1 metallo-beta-lactamase
+blaVCC	bla-A_carba	blaVCC	NF000518.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VCC family carbapenem-hydrolyzing class A beta-lactamase
+blaVEB	bla-A2	blaVEB	NF000390.2	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	VEB family class A extended-spectrum beta-lactamase
+blaVHH	blaCARB_gen	blaVHH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	VHH family class A beta-lactamase
+blaVHW	blaCARB_gen	blaVHW	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	VHW family class A beta-lactamase
+blaVIM	bla-B1	blaVIM	NF012100.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VIM family subclass B1 metallo-beta-lactamase
+blaVMB	bla-B1	blaVMB	NF038184.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VMB family subclass B1 metallo-beta-lactamase
+blaYEM	bla-B2	blaYEM	NF038166.1	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	YEM family subclass B2 metallo-beta-lactamase
+blaYRC	CMY2-MIR-ACT-EC	blaYRC	NF038089.1	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	YRC family class C beta-lactamase
+blaZ-mecC	blaZ_gen	blaZ	NF033140.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ
+blaZOG	bla-B1	blaZOG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ZOG family subclass B1 metallo-beta-lactamase
+blaZ_gen	bla-A	bla	NF033141.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaZ-like penicillin-hydrolyzing class A beta-lactamase
+blaZ	blaZ_gen	blaZ	NF033139.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	penicillin-hydrolyzing class A beta-lactamase BlaZ
+bla	AMR	bla	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactamase
+ble-MBL	sequest	ble	NF012202.0	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein Ble-MBL
+ble-Sh	ble	ble-Sh	NF000489.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	phleomycin/bleomycin binding protein Ble-Sh
+ble-Sv	ble	ble	NF000028.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMA family bleomycin binding protein
+bleO	sequest	bleO	NF000027.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein
+ble_BLMT_gen	sequest	ble	NF000005.4	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMT family bleomycin binding protein
+ble_Tn5	ble_BLMT_gen	ble	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein BLMT
+ble	sequest	ble	NF033156.1	140.00	140.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMA family bleomycin binding protein
+blmA	ble	blmA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein BLMA
+blmB_tlmB	AMR	blmB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase
+blmB	blmB_tlmB	blmB	NF000483.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase BlmB
+bmaE	VIRULENCE_Ecoli	bmaE	-	0.00	0.00	87.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			M agglutinin-type afimbrial adhesin BmaE/AfaE-8
+cadA_Lm	P-type_ATPase	cadA	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium-translocating P-type ATPase CadA
+cadC_Lm	HTH_5	cadC	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	Cd(II)-sensing metalloregulatory transcriptional repressor CadC
+cadC_Sa	HTH_5	cadC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC
+cadD	METAL	cadD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium resistance transporter CadD
+cadR	METAL	cadR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium resistance transcriptional regulator CadR
+capU	VIRULENCE_Ecoli	capU	-	0.00	0.00	92.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			putative hexosyltransferase CapU
+car(A)	abcf-produ	car(A)	NF000166.1	1050.00	1050.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Car(A)
+cat-TC	catA9	cat-TC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-9 chloramphenicol O-acetyltransferase Cat-TC
+cat86	catA6	cat86	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-6 chloramphenicol O-acetyltransferase Cat86
+catA10	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-10 chloramphenicol O-acetyltransferase
+catA11	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase
+catA13	catA	catA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-13 chloramphenicol O-acetyltransferase
+catA14	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-14 chloramphenicol O-acetyltransferase
+catA15	catA	catA15	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-15 chloramphenicol acetyltransferase CatA15
+catA16	catA	catA16	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-16 chloramphenicol O-acetyltransferase CatQ
+catA1	catA	catA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-1 chloramphenicol O-acetyltransferase
+catA2	catA	catA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-2 chloramphenicol O-acetyltransferase CatII
+catA3	catA	catA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-3 chloramphenicol O-acetyltransferase CatIII
+catA4	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-4 chloramphenicol O-acetyltransferase
+catA5	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-5 chloramphenicol O-acetyltransferase
+catA6	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-6 chloramphenicol O-acetyltransferase
+catA7	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-7 chloramphenicol O-acetyltransferase
+catA8	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-8 chloramphenicol O-acetyltransferase
+catA9	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-9 chloramphenicol O-acetyltransferase
+catA	cat	catA	NF000491.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase
+catB10	catB	catB10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase CatB10
+catB1	catB	catB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-1 chloramphenicol O-acetyltransferase CatB1
+catB2	catB	catB2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-2 chloramphenicol O-acetyltransferase CatB2
+catB3	catB	catB3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-3 chloramphenicol O-acetyltransferase CatB3
+catB7	catB	catB7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-4 chloramphenicol O-acetyltransferase CatB7
+catB8	catB	catB8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-3 chloramphenicol O-acetyltransferase CatB8
+catB9	catB	catB9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-5 chloramphenicol O-acetyltransferase CatB9
+catB	cat	catB	NF000490.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase
+catC	cat	catC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase
+catD	catA11	catD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase CatD
+catP	catA11	catP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase CatP
+catU	catA	catU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase
+catV	catA	catV	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase CatV
+cat	AMR	cat	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol O-acetyltransferase CAT
+cblA	bla-A2	cblA	NF033098.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CblA family class A beta-lactamase
+cdtB_III	cdtB	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type III/V nuclease subunit CdtB
+cdtB_II	cdtB	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type II nuclease subunit CdtB
+cdtB_IV	cdtB	cdtB	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type IV nuclease subunit CdtB
+cdtB_I	cdtB	cdtB	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type I nuclease subunit CdtB
+cdtB_Salmo	VIRULENCE	cdtB	-	0.00	0.00	81.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin S-CDT
+cdtB	VIRULENCE_Ecoli	cdtB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin nuclease subunit CdtB
+cepA	bla-A2	cepA	NF033102.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CepA family class A extended-spectrum beta-lactamase
+cepH	blaCMY-FOX	cepH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase CepH
+cepS	blaCMY-FOX	cepS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase CepS
+cfaC	VIRULENCE_Ecoli	cfaC	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			CFA/I pilus usher protein CfaC
+cfiA_fam	bla-B1	cfiA	NF000322.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CfiA family subclass B1 metallo-beta-lactamase
+cfr(B)	cfr_gen	cfr(B)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(B)
+cfr(C)	cfr_gen	cfr(C)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(C)
+cfr(D)	cfr_gen	cfr(D)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(D)
+cfr(E)	cfr_gen	cfr(E)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(E)
+cfr-Cb	cfr_gen	cfr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase
+cfr_gen	AMR	cfr	NF000424.3	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase
+cfr	cfr_gen	cfr	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr
+cfxA2	cfxA_fam	cfxA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA2
+cfxA3	cfxA_fam	cfxA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA3
+cfxA4	cfxA_fam	cfxA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA4
+cfxA5	cfxA_fam	cfxA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA5
+cfxA6	cfxA_fam	cfxA6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA6
+cfxA_fam	bla-A2	cfxA	NF033100.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CfxA family class A broad-spectrum beta-lactamase
+cfxA	cfxA_fam	cfxA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA
+chrA	METAL	chrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CHROMATE	CHROMATE	chromate resistance efflux protein ChrA
+chrB_rRNA_meth	rlmA(II)_gen	chrB	NF000488.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase ChrB
+chrR_I	METAL	chrR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CHROMATE	CHROMATE	class I chromate reductase ChrR
+cif	VIRULENCE_Ecoli	cif	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector Cif
+cipA	cfr_gen	cipA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase CipA
+clbA	cfr_gen	clbA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA
+clbB	cfr_gen	clbB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB
+clbC	cfr_gen	clbC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbC
+cmlA1	cmlA	cmlA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA1
+cmlA4	cmlA	cmlA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA4
+cmlA5	cmlA	cmlA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA5
+cmlA_floR	MFS_efflux_CHL	cml	NF033134.0	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	CmlA/FloR family chloramphenicol efflux MFS transporter
+cmlA	cmlA_floR	cmlA	NF000509.1	875.00	835.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	CmlA family chloramphenicol efflux MFS transporter
+cmlB1	cmlA_floR	cmlB1	NF012203.0	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlB1
+cmlB	cmlA_floR	cmlB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlB
+cmlR	cmx_cmrA	cmlR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlR
+cmlV	cmx_cmrA	cmlV	NF012199.0	830.00	830.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlV
+cml_Ensi	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cml_Myxo	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cml_Ochro	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cmrA	cmx_cmrA	cmrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmrA
+cmx_cmrA	MFS_efflux_CHL	cmx_cmrA	NF033135.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cmx/CmrA family chloramphenicol efflux MFS transporter
+cmx	cmx_cmrA	cmx	NF000510.1	800.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter Cmx
+cna	VIRULENCE_Saur	cna	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			collagen adhesin Cna
+cnf1	cnf_gen	cnf1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF1
+cnf2	cnf_gen	cnf2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF2
+cnf3	cnf_gen	cnf3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF3
+cnf_gen	VIRULENCE_Ecoli	cnf	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			CNF1 family cytotoxic necrotizing factor
+cnrA	METAL-RND-IM	cnrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel efflux RND transporter permease subunit CnrA
+cnrC	METAL	cnrC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel efflux RND transporter outer membrane subunit CnrC
+cnrT	METAL	cnrT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel diffusion facilitator CnrT
+cnrY	METAL	cnrY	-	0.00	0.00	80.00	90.00	90.00	81.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance system anti-sigma factor CnrY
+cofA	pilus	cofA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type IV pilus CFA/III major pilin
+copA_Ehir	P-type_ATPase	copA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-translocating P-type ATPase CopA
+copB_Ehir	P-type_ATPase	copB	-	0.00	0.00	77.00	90.00	90.00	80.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver-translocating P-type ATPase CopB
+copC_Psyr	copC	copC	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper homeostasis periplasmic binding protein CopC
+copC	METAL	copC	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			copper homeostasis periplasmic binding protein CopC
+copD	METAL	copD	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			copper homeostasis membrane protein CopD
+copL	METAL	copL	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	transcriptional regulator CopL
+copP	METAL	copP	NF033781.1	112.00	112.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	copper-binding metallochaperone CopP
+copR_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CopR family heavy metal response regulator
+copR	copR_gen	copR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	heavy metal response regulator transcription factor CopR
+copS	METAL	copS	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance membrane spanning protein CopS
+cpa	VIRULENCE_Cperf	cpa	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			alpha-toxin
+cpb2	VIRULENCE_Cperf	cpb2	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-2 toxin CPB2
+cpb	VIRULENCE_Cperf	cpb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-channel forming cytolysin CPB
+cpd	VIRULENCE_Cperf	cpd	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-channel forming cytolysin CPD
+cpe	VIRULENCE_Cperf	cpe	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterotoxin CPE
+cphA1	cphA	cphA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B2 metallo-beta-lactamase CphA1
+cphA	bla-B2	cphA	NF000329.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CphA family subclass B2 metallo-beta-lactamase
+cpt	AMR	cpt	NF033114.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol phosphotransferase CPT
+crcB	BIOCIDE	crcB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	fluoride efflux transporter CrcB
+crpP	AMR	crpP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FLUOROQUINOLONE	FLUOROQUINOLONE	ciprofloxacin resistance protein CrpP
+cueA	P-type_ATPase	cueA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance metal-translocating P1-type ATPase CueA
+cusB_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CusB family metal efflux RND transporter periplasmic adaptor subunit
+cvaC	VIRULENCE_Ecoli	cvaC	-	0.00	0.00	83.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			colicin V
+dfr1_rpt	dfrA	dfrA	NF000008.1	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant repeat-containing dihydrofolate reductase DfrA1
+dfrA10	dfr_gen	dfrA10	NF000018.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA10
+dfrA12_A21	dfr_gen	dfrA	NF000055.3	330.00	330.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	DfrA12/DfrA21 family trimethoprim-resistant dihydrofolate reductase
+dfrA12	dfrA12_A21	dfrA12	NF000053.2	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA12
+dfrA14	dfrA	dfrA14	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA14
+dfrA15	dfrA	dfrA15	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA15
+dfrA16	dfrA	dfrA16	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA16
+dfrA17	dfrA	dfrA17	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA17
+dfrA18	dfr_gen	dfrA18	NF000039.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA18
+dfrA19	dfr_gen	dfrA19	NF000041.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA19
+dfrA1	dfrA	dfrA1	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA1
+dfrA20	dfr_gen	dfrA20	NF000127.2	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA20
+dfrA21	dfrA12_A21	dfrA21	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA21
+dfrA22	dfrA12_A21	dfrA22	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA22
+dfrA23	dfr_gen	dfrA23	NF000134.2	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA23
+dfrA24	dfr_gen	dfrA24	NF000146.2	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA24
+dfrA25	dfrA	dfrA25	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA25
+dfrA26	dfr_gen	dfrA26	NF000006.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA26
+dfrA27	dfrA	dfrA27	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA27
+dfrA29	dfrA	dfrA29	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA29
+dfrA30	dfrA	dfrA30	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA30
+dfrA31	dfrA	dfrA31	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA31
+dfrA32	dfrA	dfrA32	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	20.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA32
+dfrA33	dfrA12_A21	dfrA33	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA33
+dfrA34	dfr_gen	dfrA34	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA34
+dfrA35	dfr_gen	dfrA35	NF033851.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA35
+dfrA36	dfr_gen	dfrA36	NF033868.0	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA36
+dfrA37	dfrA	dfrA37	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA37
+dfrA38	dfr_gen	dfrA38	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA38
+dfrA39	dfr_gen	dfrA39	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA39
+dfrA3b	dfr_gen	dfrA3b	NF000065.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA3b
+dfrA3	dfr_gen	dfrA3	NF000019.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA3
+dfrA42	dfr_gen	dfrA42	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA42
+dfrA43	dfr_gen	dfrA43	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA43
+dfrA44	dfr_gen	dfrA44	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA44
+dfrA46	dfrA	dfrA46	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA46
+dfrA47	dfrA12_A21	dfrA47	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA47
+dfrA48	dfrA	dfrA48	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA48
+dfrA4	dfr_gen	dfrA4	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA4
+dfrA5	dfrA	dfrA5	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA5
+dfrA6	dfrA	dfrA6	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA6
+dfrA7	dfrA	dfrA7	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA7
+dfrA8	dfr_gen	dfrA8	NF000126.2	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA8
+dfrA9	dfr_gen	dfrA9	NF000109.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA9
+dfrA	dfr_gen	dfrA	NF000330.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA
+dfrB1	dfrB	dfrB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB1
+dfrB2	dfrB	dfrB2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB2
+dfrB4	dfrB	dfrB4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB4
+dfrB5	dfrB	dfrB5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB5
+dfrB	dfr_gen	dfrB	NF000331.1	160.00	160.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB
+dfrC	dfr_gen	dfrC	NF000155.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrC
+dfrD	dfr_DGK	dfrD	NF000159.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrD
+dfrE	dfr_gen	dfrE	NF040541.1	347.00	347.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrE
+dfrF	dfr_gen	dfrF	NF000333.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrF
+dfrG	dfr_DGK	dfrG	NF000143.1	365.00	365.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrG
+dfrI	dfr_gen	dfrI	NF000012.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrI
+dfrK	dfr_DGK	dfrK	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrK
+dfr_DGK	dfr_gen	dfr	NF000332.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	DfrD/DfrG/DfrK family trimethoprim-resistant dihydrofolate reductase
+dfr_gen	AMR	dfrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase
+dpsA	METAL	dpsA	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL			non-specific DNA-binding protein DpsA
+eae_typing_E._coli	VIRULENCE	eae	NF033627.3	1400.00	1400.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	INTIMIN	intimin
+eat(A)	lsa	eat(A)	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	0	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN	ABC-F type ribosomal protection-like protein Eat(A)
+eatA	auto_tox	eatA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin EatA
+ednB	VIRULENCE_Saur	ednB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			epidermal cell differentiation inhibitor EdnB
+efa1	VIRULENCE_Ecoli	efa1	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			lymphostatin Efa1/LifA
+efflux_TF	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			antibiotic efflux transcriptional regulator
+ehxA	VIRULENCE_Ecoli	ehxA	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterohemolysin EhxA
+eilA	VIRULENCE_Ecoli	eilA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			HilA family transcriptional regulator EilA
+emhA	RND-peri	emhA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter periplasmic adaptor subunit EmhA
+emhB	RND-IM	emhB	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter permease subunit EmhB
+emhC	adeC-K-oprM	emhC	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter outer membrane subunit EmhC
+emrA-sm	MFS_efflux	emrA	-	0.00	0.00	88.00	90.00	90.00	88.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
+emrB-sm	MFS_efflux	emrB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter permease subunit EmrB
+emrC	RND-OM	emrC	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux transporter outer membrane subunit EmrC
+emrD3	MFS_efflux	emrD3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter EmrD-3
+emrD	MFS_efflux	emrD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter EmrD
+emtA_fam	AMR	emt	NF033398.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AVILAMYCIN	AVILAMYCIN	EmtA family 23S rRNA (guanine(2470)) methyltransferase
+emtA	emtA_fam	emtA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AVILAMYCIN	AVILAMYCIN	23S rRNA (guanine(2470)) methyltransferase EmtA
+epeA	auto_tox	epeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EpeA
+epsilon-1	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-2	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-3	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-4	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-6	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-7	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	XI	intimin type xi
+epsilon-8	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon	eae_typing_E._coli	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+ere(A)	ere	ere(A)	NF000208.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	EreA family erythromycin esterase
+ere(B)	ere	ere(B)	NF000209.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EreB family erythromycin esterase
+ere(D)	ere	ere(D)	NF000516.1	800.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EreD family erythromycin esterase
+ere	AMR	ere	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	erythromycin esterase
+erm(30)	erm-23S_rRNA	erm(30)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(30)
+erm(31)	erm-23S_rRNA	erm(31)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(31)
+erm(32)	rlmA(II)_gen	erm(32)	NF000133.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	23S rRNA (guanine(748)-N(1))-methyltransferase Erm(32)
+erm(33)	erm-23S_rRNA	erm(33)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(33)
+erm(34)	erm-23S_rRNA	erm(34)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)
+erm(35)	erm-23S_rRNA	erm(35)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(35)
+erm(36)	erm-23S_rRNA	erm(36)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(36)
+erm(37)	erm_gen	erm(37)	NF000468.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)
+erm(38)	erm-23S_rRNA	erm(38)	NF012218.0	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(38)
+erm(39)	erm-23S_rRNA	erm(39)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(39)
+erm(40)	erm-23S_rRNA	erm(40)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(40)
+erm(42)	erm-23S_rRNA	erm(42)	NF000077.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(42)
+erm(43)	erm-23S_rRNA	erm(43)	NF000412.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(43)
+erm(44)v	erm-23S_rRNA	erm(44)v	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(44)v
+erm(44)	erm-23S_rRNA	erm(44)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(44)
+erm(45)	erm-23S_rRNA	erm(45)	NF000411.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(45)
+erm(46)	erm-23S_rRNA	erm(46)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(46)
+erm(47)	erm-23S_rRNA	erm(47)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(47)
+erm(48)	erm-23S_rRNA	erm(48)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(48)
+erm(49)	erm-23S_rRNA	erm(49)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(49)
+erm(A)	erm-23S_rRNA	erm(A)	NF012222.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
+erm(B)	erm-23S_rRNA	erm(B)	NF012220.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)
+erm(C)	erm-23S_rRNA	erm(C)	NF012219.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)
+erm(D)	erm-23S_rRNA	erm(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(D)
+erm(E)	erm_SHROVE	erm(E)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(E)
+erm(F)	erm-23S_rRNA	erm(F)	NF012223.0	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)
+erm(G)	erm-23S_rRNA	erm(G)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)
+erm(H)	erm_SHROVE	erm(H)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(H)
+erm(K)	erm-23S_rRNA	erm(K)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(K)
+erm(N)	erm-23S_rRNA	erm(N)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(N)
+erm(O)	erm_SHROVE	erm(O)	NF000087.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(O)
+erm(Q)	erm-23S_rRNA	erm(Q)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Q)
+erm(R)	erm_SHROVE	erm(R)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(R)
+erm(S)	erm_SHROVE	erm(S)	NF000024.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(S)
+erm(T)	erm-23S_rRNA	erm(T)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)
+erm(U)	erm-23S_rRNA	erm(U)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(U)
+erm(V)	erm_SHROVE	erm(V)	NF000047.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(V)
+erm(W)	erm-23S_rRNA	erm(W)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(W)
+erm(X)	erm-23S_rRNA	erm(X)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)
+erm(Y)	erm-23S_rRNA	erm(Y)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Y)
+erm(Z)	erm-23S_rRNA	erm(Z)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Z)
+erm-23S_rRNA	erm_gen	erm	NF000499.1	215.00	215.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S ribosomal RNA methyltransferase Erm
+erm_SHROVE	erm-23S_rRNA	erm	NF000337.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ErmE/ErmH/ErmO/ErmR family 23S rRNA (adenine(2058)-N(6))-methyltransferase
+erm_gen	AMR	erm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Erm family 23S rRNA (adenine(2058)-N(6))-methyltransferase
+espA	VIRULENCE_Ecoli	espA	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocon filament protein EspA
+espB	VIRULENCE_Ecoli	espB	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocon pore-forming subunit EspB
+espC	auto_tox	espC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin EspC
+espF	VIRULENCE_Ecoli	espF	-	0.00	0.00	75.00	90.00	90.00	80.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE effector EspF
+espI	auto_tox	espI	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EspI
+espJ_gen	VIRULENCE_Ecoli	espJ	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			EspJ family T3SS effector ADP-ribosyltransferase
+espJ	espJ_gen	espJ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector ADP-ribosyltransferase EspJ
+espK	VIRULENCE_Ecoli	espK	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector EspK
+espP	auto_tox	espP	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EspP
+espX1	VIRULENCE_Ecoli	espX1	-	0.00	0.00	84.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector EspX1
+estDL136	AMR	estDL136	NF033149.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol hydrolase
+estX	AMR	estX	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			alpha/beta fold putative hydrolase EstX
+eta	VIRULENCE_Saur	eta	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			exfoliative toxin A
+etb	VIRULENCE_Saur	etb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			exfoliative toxin B
+etpD	VIRULENCE_Ecoli	etpD	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			variant type II secretion system secretin EtpD
+etx	VIRULENCE_Cperf	etx	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			epsilon toxin type B
+f17a	VIRULENCE_Ecoli	f17a	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F17A fimbrial adhesin
+f17g	VIRULENCE_Ecoli	f17g	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F17G fimbrial adhesin
+faeG	VIRULENCE_Ecoli	faeG	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F4 (K88) fimbria major subunit/adhesin FaeG
+farB	AMR	farB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	fatty acid resistance MFS efflux transporter permease subunit FarB
+fasA	VIRULENCE_Ecoli	fasA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F6 fimbrial major subunit FasA
+fdeC	VIRULENCE_Ecoli	fdeC	-	0.00	0.00	88.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			intimin-like adhesin FdeC
+fedA	VIRULENCE_Ecoli	fedA	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F18 fimbrial major subunit FedA
+fedF	VIRULENCE_Ecoli	fedF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F18 fimbrial adhesin subunit FedF
+fexA	MFS_efflux_CHL	fexA	NF000218.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FexA
+fieF	CDF_efflux	fieF	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	METAL			CDF family cation-efflux transporter FieF
+fim41a	VIRULENCE_Ecoli	fim41a	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			fimbrial adhesin F41 protein Fim41a
+floR2	floR	floR2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FloR2
+floR	cmlA_floR	floR	NF000219.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FloR
+focG	VIRULENCE_Ecoli	focG	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F1C fimbria minor subunit FocG
+fomA	AMR	fomA	NF000338.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance kinase FomA
+fomB	AMR	fomB	NF000361.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FomB family phosphonate monophosphate kinase
+fos-Crono	fos_GT	fos	NF000339.2	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fos-Vibrio	fos_GT	fos	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosG/FosC2-related fosfomycin resistance glutathione transferase
+fosA5_fam	fosA_gen	fosA	NF040540.1	310.00	310.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA5 family fosfomycin resistance glutathione transferase
+fosA7_fam	fosA_gen	fosA7	NF032892.0	305.00	305.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA7 family fosfomycin resistance glutathione transferase
+fosA8_fam	fosA_gen	fosA8	NF033933.0	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA8 family fosfomycin resistance glutathione transferase
+fosA_PA1129	fos_GT	fosA	NF000094.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fosA_gen	fos_GT	fosA	NF000221.4	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fosB-Bcer	fosB_gen	fosB	NF000098.1	295.00	295.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB family fosfomycin resistance bacillithiol transferase
+fosB-Saur	fosB_gen	fosB	NF000085.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase
+fosB-Sepi	fosB_gen	fosB	NF000063.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB family fosfomycin resistance bacillithiol transferase
+fosB_gen	fos_gen	fosB	NF000493.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB/FosD family fosfomycin resistance bacillithiol transferase
+fosC2	fos_GT	fosC2	NF000074.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosC2 family fosfomycin resistance glutathione transferase
+fosC	AMR	fosC	NF000122.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance kinase FosC
+fosD	fosB_gen	fosD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance bacillithiol transferase FosD
+fosE	fosX_gen	fosE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosE
+fosF	fos_GT	fosF	NF000494.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosF
+fosG	fos_GT	fosG	NF000467.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosG family fosfomycin resistance glutathione transferase
+fosI	fosX_gen	fosI	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosI
+fosK	fos_GT	fosK	NF000495.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosK
+fosL	fos_GT	fosL	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosL
+fosM1	fosM	fosM1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM1
+fosM2	fosM	fosM2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM2
+fosM3	fosM	fosM3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM3
+fosM	fos_gen	fosM	NF038306.1	255.00	255.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosM family fosfomycin resistance protein
+fosU	fos_GT	fosU	NF038311.1	295.00	295.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosU family fosfomycin resistance glutathione transferase
+fosX_gen	fos_gen	fosX	NF000222.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosX/FosE/FosI family fosfomycin resistance hydrolase
+fosX	fosX_gen	fosX	-	0.00	0.00	84.00	90.00	90.00	90.00	90.00	35.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosX
+fos_A3_A4	fosA_gen	fosA	NF000075.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA3/FosA4 family fosfomycin resistance glutathione transferase
+fos_A_A2	fosA_gen	fosA	NF000026.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA/FosA2 family fosfomycin resistance glutathione transferase
+fos_GT	fos_gen	fos	NF000496.1	190.00	190.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase
+fos_gen	AMR	fos	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin inactivation enzyme
+fos_related	fos_gen	fos	NF000125.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	Fos family putative thiol transferase
+fusBCD_gen	AMR	fus	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusB/FusC/FusD family EF-G-binding protein
+fusB_set	fusBCD_gen	fusB	NF000340.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusB family fusidic acid resistance EF-G-binding protein
+fusB	fusB_set	fusB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid resistance EF-G-binding protein FusB
+fusC_set	fusBCD_gen	fusC	NF000341.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusC family fusidic acid resistance EF-G-binding protein
+fusD	fusBCD_gen	fusD	NF000460.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusD family fusidic acid resistance EF-G-binding protein
+fusF	fusBCD_gen	fusF	NF000503.1	435.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid resistance EF-G-binding protein FusF
+fusH	AMR	fusH	NF000157.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid esterase FusH
+gamma-1	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-2	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	THETA	intimin type theta
+gamma-3	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-4	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-5	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-6	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma	eae_typing_E._coli	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+garos_AAA	AMR	gar_fam	NF038208.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	garosamine-type aminoglycoside resistance ATP-binding protein
+gar	garos_AAA	gar	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	gentamicin resistance ATP-binding protein Gar
+golS	METAL	golS	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	GOLD	GOLD	Au(I) sensor transcriptional regulator GolS
+golT	P-type_ATPase	golT	-	0.00	0.00	92.00	90.00	90.00	92.00	90.00	25.00	1	STRESS	METAL	COPPER/GOLD	COPPER/GOLD	gold/copper-translocating P-type ATPase GolT
+grdA	garos_AAA	grdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	gentamicin resistance ATP-binding protein GrdA
+grm	rmt	grm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	Grm family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+hbp_auto	auto_tox	-	-	0	0	94.00	90.00	90.00	96.00	90.00	25.00	0	VIRULENCE	VIRULENCE			hemoglobin-binding protease autotransporter Hbp
+hld	VIRULENCE_Saur	hld	-	0.00	0.00	91.00	90.00	90.00	91.00	90.00	90.00	1	VIRULENCE	VIRULENCE			delta-hemolysin
+hlgA	VIRULENCE_Saur	hlgA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgAB subunit A
+hlgB	VIRULENCE_Saur	hlgB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgAB/HlgCB subunit B
+hlgC	VIRULENCE_Saur	hlgC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgCB subunit C
+hlyA-alpha	VIRULENCE_Ecoli	hlyA-alpha	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			RTX toxin hemolysin HlyA
+hlyE	VIRULENCE_Ecoli	hlyE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			hemolysin HlyE
+hmrM	MATE_efflux	hmrM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	sodium-coupled multidrug efflux MATE transporter HmrM
+hugA	bla-A	hugA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+iap	VIRULENCE_Cperf	iap	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin iota enzymatic subunit Ia
+ibeA	VIRULENCE_Ecoli	ibeA	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			putative intracellular survival FAD-dependent oxidoreductase IbeA
+ibp	VIRULENCE_Cperf	ibp	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin iota binding subunit Ib
+icaC	VIRULENCE_Saur	icaC	-	0.00	0.00	50.00	90.00	90.00	75.00	90.00	40.00	1	VIRULENCE	VIRULENCE			polysaccharide intercellular adhesin biosynthesis/export protein IcaC
+icr-Mo	pmrC_gen	icr-Mo	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	COLISTIN	COLISTIN	phosphoethanolamine--lipid A transferase ICR-Mo
+iha	OM_sidero	iha	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bifunctional siderophore receptor/adhesin Iha
+iota-1	iota	eae	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	IOTA	intimin type iota
+iota	eae_typing_E._coli	eae	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	IOTA	intimin type iota
+ipaD	VIRULENCE_Ecoli	ipaD	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system needle tip complex protein IpaD
+ipaH1	ipa_gen	ipaH1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH1/H6
+ipaH2	ipa_gen	ipaH2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH2
+ipaH3	ipa_gen	ipaH3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH3
+ipaH4	ipa_gen	ipaH4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH4/H7
+ipaH5	ipa_gen	ipaH5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH5
+ipaH9.8	ipa_gen	ipaH9.8	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH9.8
+ipa_gen	VIRULENCE_Ecoli	ipa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase
+ireA	OM_sidero	ireA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			TonB-dependent siderophore receptor IreA
+iri	rox_gen	iri	NF000343.1	950.00	950.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase Iri
+iroB	VIRULENCE	iroB	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	1	VIRULENCE	VIRULENCE			salmochelin biosynthesis C-glycosyltransferase IroB
+iroC	VIRULENCE	iroC	-	0.00	0.00	75.00	90.00	90.00	82.00	90.00	25.00	1	VIRULENCE	VIRULENCE			salmochelin/enterobactin export ABC transporter IroC
+iroD	VIRULENCE	iroD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catecholate siderophore esterase IroD
+iroE	VIRULENCE_Ecoli	iroE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catecholate siderophore esterase IroE
+iroN	OM_sidero	iroN	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			siderophore salmochelin receptor IroN
+iss	VIRULENCE_Ecoli	iss	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			increased serum survival lipoprotein Iss
+iucA	VIRULENCE_Ecoli	iucA	-	0.00	0.00	73.00	80.00	90.00	83.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aerobactin synthase IucA
+iucB	VIRULENCE	iucB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			N(6)-hydroxylysine O-acetyltransferase IucB
+iucC	VIRULENCE	iucC	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			NIS family aerobactin synthetase IucC
+iucD	VIRULENCE	iucD	-	0.00	0.00	82.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			NADPH-dependent L-lysine N(6)-monooxygenase IucD
+iutA	VIRULENCE_Ecoli	iutA	-	0.00	0.00	77.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ferric aerobactin receptor IutA
+kamB	npmA_gen	kamB	NF000363.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase KamB
+katP	VIRULENCE_Ecoli	katP	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catalase/peroxidase KatP
+kdeA	MFS_efflux	kdeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter KdeA
+klaB	METAL	klaB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance system protein klaB
+klaC	METAL	klaC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance system protein klaC
+lambda-2	lambda	eae	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	70.00	1	VIRULENCE	VIRULENCE	INTIMIN	LAMBDA	intimin type lambda
+lambda	eae_typing_E._coli	eae	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	70.00	1	VIRULENCE	VIRULENCE	INTIMIN	LAMBDA	intimin type lambda
+lin	abc-f	lin	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lmo0919 family lincomycin resistance ABC-F type ribosomal protection protein
+lmrC_abcf	abc-f	lmrC	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ABC-F type ribosomal protection protein LmrC
+lmrS	BIOCIDE	lmrS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	multidrug efflux MFS transporter LmrS
+lngA	pilus	lngA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type IV pilus longus major pilin
+lnu(A)	lnu_AE	lnu(A)	NF000236.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(A)
+lnu(AN2)	lnu_AE	lnu(AN2)	NF000153.1	340.00	340.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(AN2)
+lnu(B)	lnu_BFG	lnu(B)	NF000235.3	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(B)
+lnu(C)	lnu_CDP	lnu(C)	NF000141.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(C)
+lnu(D)	lnu_CDP	lnu(D)	NF000017.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(D)
+lnu(E)	lnu_AE	lnu(E)	NF000478.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(E)
+lnu(F)	lnu_BFG	lnu(F)	NF000119.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(F)
+lnu(G)	lnu_BFG	lnu(G)	NF033182.0	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(G)
+lnu(P)	lnu_CDP	lnu(P)	NF000061.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(P)
+lnu_AE	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase
+lnu_BFG	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Lnu(B)/Lnu(F)/Lnu(G) family lincosamide nucleotidyltransferase
+lnu_CDP	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Lnu(C)/Lnu(D)/Lnu(P) family lincosamide nucleotidyltransferase
+lnu	AMR	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase
+lpfA-O113	lpfA_gen	lpfA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA-O113
+lpfA1	lpfA_gen	lpfA1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA1
+lpfA2	lpfA_gen	lpfA2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA2
+lpfA_gen	VIRULENCE_Ecoli	lpfA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA
+lsa(A)	lsa	lsa(A)	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(A)
+lsa(B)	lsa	lsa(B)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(B)
+lsa(C)	lsa	lsa(C)	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(C)
+lsa(D)	lsa	lsa(D)	-	0.00	0.00	83.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(D)
+lsa(E)	lsa	lsa(E)	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(E)
+lsa	abc-f	lsa	NF000167.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	Lsa family ABC-F type ribosomal protection protein
+ltcA	VIRULENCE_Ecoli	ltcA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-labile enterotoxin LT subunit A
+lukD	VIRULENCE_Saur	lukD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component leukocidin LukED subunit D
+lukE	VIRULENCE_Saur	lukE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component leukocidin LukED subunit E
+lukF-PV	VIRULENCE_Saur	lukF-PV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Panton-Valentine bi-component leukocidin subunit F
+lukS-PV	VIRULENCE_Saur	lukS-PV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Panton-Valentine bi-component leukocidin subunit S
+macro_glyco	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	MACROLIDE	MACROLIDE	macrolide glycosyltransferase
+mchB	VIRULENCE_Ecoli	mchB	-	0.00	0.00	99.00	90.00	95.00	99.00	95.00	40.00	1	VIRULENCE	VIRULENCE			microcin H47
+mchF	VIRULENCE_Ecoli	mchF	-	0.00	0.00	96.00	90.00	90.00	97.00	90.00	25.00	1	VIRULENCE	VIRULENCE			microcin H47 export transporter peptidase/ATP-binding subunit MchF
+mco	multi_Cu_ox	mco	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	multi-copper oxidase Mco
+mcr-10	pmrC_gen	mcr-10	NF033862.2	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-10 family phosphoethanolamine--lipid A transferase
+mcr-1	pmrC_gen	mcr-1	NF000465.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-1 family phosphoethanolamine--lipid A transferase
+mcr-2	pmrC_gen	mcr-2	NF012159.0	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-2 family phosphoethanolamine--lipid A transferase
+mcr-3_set	pmrC_gen	mcr-3	NF033409.0	1075.00	1075.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-3 family phosphoethanolamine--lipid A transferase
+mcr-3	mcr-3_set	mcr-3	NF033408.5	1225.00	1225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-3 family phosphoethanolamine--lipid A transferase
+mcr-4	pmrC_gen	mcr-4	NF033462.1	1225.00	1225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-4 family phosphoethanolamine--lipid A transferase
+mcr-5	pmrC_gen	mcr-5	NF033463.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-5 family phosphoethanolamine--lipid A transferase
+mcr-6	pmrC_gen	mcr-6	NF033670.1	1235.00	1235.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-6 family phosphoethanolamine--lipid A transferase
+mcr-7	pmrC_gen	mcr-7	NF033671.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-7 family phosphoethanolamine--lipid A transferase
+mcr-8	pmrC_gen	mcr-8	NF033669.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-8 family phosphoethanolamine--lipid A transferase
+mcr-9	pmrC_gen	mcr-9	NF033836.1	1240.00	1240.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	COLISTIN	COLISTIN	MCR-9 family phosphoethanolamine--lipid A transferase
+mdsA	RND-peri	mdsA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MdsA
+mdsB	RND-IM	mdsB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit MdsB
+mdtM	MFS_efflux	mdtM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter MdtM
+mecA-ceftar	mecA	mecA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	ceftaroline-resistant PBP2a family peptidoglycan transpeptidase MecA
+mecA1	mec_gen	mecA1	NF000410.1	1480.00	1480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA1
+mecA2	mec_gen	mecA2	NF000408.1	1525.00	1525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA2
+mecA	mec_gen	mecA	NF000409.1	1490.00	1490.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
+mecB	mec_gen	mecB	NF000406.1	1450.00	1450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecB
+mecC2	mec_gen	mecC2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC2
+mecC3	mec_gen	mecC3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC3
+mecC	mec_gen	mecC	NF000407.1	1500.00	1500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC
+mecD	mec_gen	mecD	NF033378.1	1450.00	1450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecD
+mecI_of_mecA	mecI	mecI	NF000243.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	mecA-type methicillin resistance repressor MecI
+mecI_of_mecC	mecI	mecI	NF000244.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	mecC-type methicillin resistance repressor MecI
+mecI	blaI_gen	mecI	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	methicillin resistance repressor MecI
+mecR1	blaR1_gen	mecR1	NF033109.1	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	beta-lactam sensor/signal transducer MecR1
+mec_gen	AMR	mec	NF000237.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase
+mef(A)	mef_gen	mef(A)	NF000245.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	macrolide efflux MFS transporter Mef(A)
+mef(B)	mef_gen	mef(B)	NF000051.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(B)
+mef(C)	mef_gen	mef(C)	NF000246.1	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(C)
+mef(D)	mef_gen	mef(D)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	macrolide efflux MFS transporter Mef(D)
+mef(En2)	mef_gen	mef(En2)	NF000154.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(En2)
+mef(F)	mef_gen	mef(F)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(F)
+mef_gen	MFS_efflux	mef	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mef family macrolide efflux MFS transporter
+mepA	MATE_efflux	mepA	NF000131.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MATE transporter MepA
+merA	METAL	merA	TIGR02053.1	454.45	454.45	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury(II) reductase
+merB1	merB	merB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial lyase MerB1
+merB_gen	METAL	merB	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			organomercurial lyase MerB
+merB	merB_gen	merB	NF033555.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial lyase MerB
+merC	METAL	merC	NF033784.1	140.00	140.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial transporter MerC
+merD	METAL	merD	NF033783.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance co-regulator MerD
+merE	METAL	merE	NF010310.2	80.00	80.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	broad-spectrum mercury transporter MerE
+merF	METAL	merF	NF033565.0	50.00	50.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system transport protein MerF
+merG	METAL	merG	NF033786.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	PHENYLMERCURY	phenylmercury resistance protein MerG
+merP	METAL	merP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system substrate-binding protein MerP
+merR_Bc1	merR_gen	merR1	-	0.00	0.00	82.00	90.00	90.00	88.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR1
+merR_Bc2	merR_gen	merR2	-	0.00	0.00	76.00	90.00	90.00	85.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR2
+merR_Ps	merR_gen	merR	NF010315.0	261.00	261.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR
+merR_gen	METAL	merR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR
+merT_RC607	merT_gen	merT	NF033560.1	130.00	130.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+merT_gen	METAL	merT	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			mercury resistance system transport protein MerT
+merT_pI258	merT_gen	merT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+merT	merT_gen	merT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+met_repress	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			metal-sensing transcriptional repressor
+mexA	RND-peri	mexA	NF033834.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MexA
+mexE	RND-peri	mexE	NF000249.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	MexE family multidrug efflux RND transporter periplasmic adaptor subunit
+mexX_amrA	RND-peri	mexX	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			MexX/AmrA family multidrug efflux RND transporter periplasmic adaptor subunit
+mexX	mexX_amrA	mexX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MexX
+mgt	macro_glyco	mgt	NF033129.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide-inactivating glycosyltransferase
+mph(A)	mph_gen	mph(A)	NF000254.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(A) family macrolide 2'-phosphotransferase
+mph(B)	mph_gen	mph(B)	NF000242.2	615.00	615.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(B) family macrolide 2'-phosphotransferase
+mph(C)	mph_gen	mph(C)	NF000240.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(C) family macrolide 2'-phosphotransferase
+mph(E)	mph_3	mph(E)	NF012158.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(E) family macrolide 2'-phosphotransferase
+mph(F)	mph_gen	mph(F)	NF000255.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(F) family macrolide 2'-phosphotransferase
+mph(G)	mph_3	mph(G)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(G) family macrolide 2'-phosphotransferase
+mphH	mph_gen	mphH	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphH
+mphJ	mph_gen	mphJ	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN/TELITHROMYCIN/TYLOSIN	macrolide 2'-phosphotransferase MphJ
+mphK	mph_gen	mphK	-	0.00	0.00	80.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphK
+mphL	mph_gen	mphL	NF038057.1	612.00	612.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphL
+mphM	mph_gen	mphM	NF038056.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphM
+mphN	mph_gen	mphN	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphN
+mph_3	mph_gen	mph	NF000241.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(E)/Mph(G) family macrolide 2'-phosphotransferase
+mph_gen	AMR	mph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide phosphotransferase
+mrdH	rcnA_gen	mrdH	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	Ni(II)/Co(II) efflux transporter permease subunit MrdH
+mreA	met_repress	mreA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL			metal-sensing transcriptional repressor MreA
+msr(A)	msr	msr(A)	NF000256.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(A)
+msr(C)	msr	msr(C)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(C)
+msr(D)	msr	msr(D)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	ABC-F type ribosomal protection protein Msr(D)
+msr(E)	msr	msr(E)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(E)
+msr(F)	msr	msrF	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(F)
+msr(G)	msr	msr(G)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(G)
+msr(H)	msr	msrH	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(H)
+msr	abc-f	msr	NF000168.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Msr family ABC-F type ribosomal protection protein
+mtrA_Ngon	efflux_TF	mtrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux transporter MtrCDE transcriptional activator MtrA
+mtrC	RND-peri	mtrC	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MtrC
+mtrF	BIOCIDE	mtrF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	AbgT family antimetabolite efflux transporter MtrF
+mtrR	EFFLUX	mtrR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux system transcriptional repressor MtrR
+multi_CopA	multi_Cu_ox	copA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	laccase-like oxidase CopA
+multi_Cu_ox	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			multi-copper oxidase
+mupA	AMR	mupA	NF000257.1	1900.00	1900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MUPIROCIN	MUPIROCIN	mupirocin-resistant isoleucine--tRNA ligase MupA
+mupB	AMR	mupB	NF000258.1	1900.00	1900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MUPIROCIN	MUPIROCIN	mupirocin-resistant isoleucine--tRNA ligase MupB
+myrA	rlmA(II)_gen	myrA	NF000476.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase MyrA
+nccH	METAL	nccH	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	STRESS	METAL	CADMIUM/COBALT/NICKEL	CADMIUM/COBALT/NICKEL	nickel/cobalt/cadmium resistance ECF sigma factor NccH
+nccX	PERI-SENSOR	nccX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM/COBALT/NICKEL	CADMIUM/COBALT/NICKEL	periplasmic metal sensor NccX
+ncrA	METAL	ncrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	Metal Resistance
+ncrB	met_repress	ncrB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	nickel-sensing transcriptional repressor NcrB
+ncrC	rcnA_gen	ncrC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	Ni(II)/Co(II) efflux transporter permease subunit NcrC
+ncrY	METAL	ncrY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance OB fold protein NcrY
+netB	VIRULENCE_Cperf	netB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			necrotizing enteritis toxin NetB
+netF	VIRULENCE_Cperf	netF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			necrotizing enteritis toxin NetF
+nfaE	VIRULENCE_Ecoli	nfaE	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Dr family non-fimbrial adhesin I chaperone NfaE
+nimABCDEF	AMR	nim	NF000261.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	NimABCDEF family nitroimidazole resistance protein
+nimA	nimABCDEF	nimA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimA
+nimB	nimABCDEF	nimB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimB
+nimC	nimABCDEF	nimC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimC
+nimD	nimABCDEF	nimD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimD
+nimE	nimABCDEF	nimE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimE
+nimIJ	AMR	nimIJ	NF000262.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	NimIJ family nitroimidazole resistance protein
+nimI	nimIJ	nimI	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimI
+nimJ	nimIJ	nimJ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimJ
+nirA	METAL	nirA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance membrane nickel efflux protein NirA
+nirB	met_repress	nirB	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel-sensing transcriptional repressor NirB
+nirD	METAL	nirD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance OB fold protein NirD
+nleA	VIRULENCE_Ecoli	nleA	-	0.00	0.00	85.00	90.00	90.00	88.00	90.00	80.00	1	VIRULENCE	VIRULENCE			type III secretion system effector NleA
+nleB2	VIRULENCE_Ecoli	nleB2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector arginine glycosyltransferase NleB2
+nleB	VIRULENCE_Ecoli	nleB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector arginine glycosyltransferase NleB
+nleC	VIRULENCE_Ecoli	nleC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector zinc metalloprotease NleC
+norM	MATE_efflux	norM	NF000263.1	950.00	950.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	sodium-coupled multidrug efflux MATE transporter NorM
+npmA_gen	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase
+npmA	npmA_gen	npmA	NF000030.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase NpmA
+nreB	METAL	nreB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance MFS transporter NreB
+nshR_tsnR	AMR	nshR	NF000477.1	425.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	NshR/TsnR family 23S rRNA methyltransferase
+nshR	nshR_tsnR	nshR	NF000035.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	NshR family nosiheptide/thiostrepton resistance 23S rRNA methyltransferase
+ole(B)	abcf-produ	ole(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Ole(B)
+oleD	mgt	oleD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	oleandomycin glycosyltransferase OleD
+oleI	macro_glyco	oleI	NF000362.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	OleI family self-immunity macrolide glycosyltransferase
+optrA	abc-f	optrA	NF000514.1	1450.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/OXAZOLIDINONE	FLORFENICOL/OXAZOLIDINONE	ABC-F type ribosomal protection protein OptrA
+oqxA	RND-peri	oqxA	NF000272.1	875.00	875.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	multidrug efflux RND transporter periplasmic adaptor subunit OqxA
+oqxB	RND-IM	oqxB	NF000037.1	2200.00	2200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	multidrug efflux RND transporter permease subunit OqxB
+otr(A)	tet_rib_protect	otr(A)	NF000120.3	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Otr(A)
+otr(B)	tet_MFS_efflux	otr(B)	NF000095.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	oxytetracycline resistance efflux MFS transporter OtrB
+papA	VIRULENCE_Ecoli	papA	-	0.00	0.00	82.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria major subunit PapA
+papC	VIRULENCE_Ecoli	papC	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial usher protein PapC
+papE	VIRULENCE_Ecoli	papE	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial minor subunit PapE
+papF	VIRULENCE_Ecoli	papF	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial tip protein PapF
+papG-III	papG	papG-III	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-III
+papG-II	papG	papG-II	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-II
+papG-I	papG	papG-I	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-I
+papG	VIRULENCE_Ecoli	papG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin
+papH	VIRULENCE_Ecoli	papH	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial minor subunit PapH
+pcoA	multi_Cu_ox	pcoA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	multicopper oxidase PcoA
+pcoB	METAL	pcoB	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-binding protein PcoB
+pcoC	copC	pcoC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance system metallochaperone PcoC
+pcoD	copD	pcoD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance inner membrane protein PcoD
+pcoE	METAL	pcoE	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance system metallochaperone PcoE
+pcoR	copR_gen	pcoR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper response regulator transcription factor PcoR
+pcoS	METAL	pcoS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance membrane spanning protein PcoS
+penA-A_Burk	bla-A	penA	NF000320.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PenA family class A beta-lactamase
+penI_Bp	bla-A	penI	NF000321.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PenI family class A extended-spectrum beta-lactamase
+perA	VIRULENCE_Ecoli	perA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			BFP system transcriptional regulator PerA
+pet	auto_tox	pet	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Pet
+pexA	MFS_efflux	pexA	NF000072.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	PHENICOL	phenicol efflux MFS transporter PexA
+pfoA	VIRULENCE_Cperf	pfoA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cholesterol-dependent cytolysin perfringolysin O
+pic_auto	auto_tox	pic	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Pic
+pilus	VIRULENCE_Ecoli	pil	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			type IV pilus protein
+pmrA	MFS_efflux	pmrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	QUINOLONE	QUINOLONE	multidrug efflux MFS transporter PmrA
+pmrC_gen	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			phosphoethanolamine--lipid A transferase
+poxtA	abc-f	poxtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein PoxtA
+qacA	MFS_efflux_qac	qacA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux MFS transporter QacA
+qacB	MFS_efflux_qac	qacB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux MFS transporter QacB
+qacCGHJ	SMR_efflux	qac	NF000384.1	160.00	160.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacCGHJ group quaternary ammonium compound efflux SMR transporter
+qacC	qacCGHJ	qacC	NF000023.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacC
+qacE_gen	SMR_qac_int	qacE	NF000276.2	185.00	185.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacE
+qacE	qacE_gen	qacE	-	0.00	0.00	97.00	99.00	99.00	97.00	99.00	99.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacE
+qacF	qac_F_L	qacF	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacF
+qacG2	SMR_qac_int	qacG2	NF000278.1	220.00	220.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacG2
+qacG	qacCGHJ	qacG	NF000277.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacG
+qacH_Lis	SMR_efflux	qacH	-	0.00	0.00	80.00	90.00	90.00	80.00	90.00	25.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qacH	qacCGHJ	qacH	NF000279.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qacJ	qacCGHJ	qacJ	NF012170.0	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacJ
+qacK	SMR_qac_int	qacK	NF033136.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacK
+qacL	qac_F_L	qacL	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacL
+qacR	BIOCIDE	qacR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	multidrug-binding transcriptional regulator QacR
+qacZ	qacH	qacZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qac_F_L	SMR_qac_int	qac	NF000067.2	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacF/QacL family quaternary ammonium compound efflux SMR transporter
+qepA	MFS_efflux	qepA	NF012169.0	1075.00	1075.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	fluoroquinolone efflux MFS transporter QepA
+qnrAS	qnr	qnrAS	NF012151.0	490.00	490.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrAS family quinolone resistance pentapeptide repeat protein
+qnrA	qnr	qnrA	NF000071.4	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrA family quinolone resistance pentapeptide repeat protein
+qnrB	qnr	qnrB	NF000420.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrB family quinolone resistance pentapeptide repeat protein
+qnrC	qnr	qnrC	NF012152.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrC family quinolone resistance pentapeptide repeat protein
+qnrD	qnr	qnrD	NF000139.2	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrD family quinolone resistance pentapeptide repeat protein
+qnrE	qnr	qnrE	NF033375.2	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrE family quinolone resistance pentapeptide repeat protein
+qnrS	qnr	qnrS	NF000056.3	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrS family quinolone resistance pentapeptide repeat protein
+qnrVC	qnr	qnrVC	NF000421.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrVC family quinolone resistance pentapeptide repeat protein
+qnr	AMR	qnr	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			Qnr family pentapeptide repeat protein
+ranA	EFFLUX	ranA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR			multidrug efflux ABC transporter ATP-binding subunit RanA
+ranB	EFFLUX	ranB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR			multidrug efflux ABC transporter permease subunit RanB
+rcnA_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			Ni(II)/Co(II) efflux transporter permease subunit
+rgt1438	rgt	rgt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	Rgt1438 family rifamycin-inactivating glycosyltransferase
+rgt	AMR	rgt	NF000354.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating glycosyltransferase Rgt
+rho-1	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rho-2	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	YPSILON	intimin type ypsilon
+rho-3	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rho	eae_typing_E._coli	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rlmA(II)_gen	AMR	rlmA(II)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase
+rmpA2	VIRULENCE	rmpA2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpA2
+rmpA	VIRULENCE	rmpA	-	0.00	0.00	89.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpA
+rmpC	VIRULENCE	rmpC	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpC
+rmpD	VIRULENCE	rmpD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype synthesis protein RmpD
+rmtA	rmt	rmtA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtA family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtB	rmt	rmtB	NF033209.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtB family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtC	rmt	rmtC	NF000150.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtD	rmt	rmtD	NF000007.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtD family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtE	rmt	rmtE	NF000069.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtE family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtF	rmt	rmtF	NF000113.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtF family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtG	rmt	rmtG	NF000114.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtG family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtH	rmt	rmtH	NF000116.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtH family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmt	AMR	rmt	NF000466.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	Rmt family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rox_gen	AMR	rox	NF033145.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase
+rox	rox_gen	rox	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase Rox
+rpeA	auto_tox	rpeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter colonization factor RpeA
+rphC	rph_gen	rphC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase RphC
+rphD	rph_gen	rphD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase RphD
+rph_gen	AMR	rph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase
+rph	rph_gen	rph	NF000283.1	1700.00	1700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase Rph
+saa	VIRULENCE_Ecoli	saa	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			autoagglutinating adhesin Saa
+sab	VIRULENCE_Ecoli	sab	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			autotransporter adhesin Sab
+sak	VIRULENCE_Saur	sak	-	0.00	0.00	90.00	50.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylokinase
+sal(A)	sal	sal(A)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Sal(A)
+sal	abc-f	sal	NF000169.1	1050.00	1050.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	Sal family ABC-F type ribosomal protection protein
+sat2_fam	sat	sat2	NF000358.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat2
+sat3	sat	sat3	NF000359.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat3
+sat4	sat	sat4	NF000360.1	380.00	380.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat4
+satA_Bant	sat	satA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase SatA
+satA_Bsub	sat	satA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase SatA
+sat_auto	auto_tox	sat	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Sat
+sat	AMR	sat	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase
+scn	VIRULENCE_Saur	scn	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			complement inhibitor SCIN-A
+sdeA	BIOCIDE	sdeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit SdeA
+sdeB	RND-IM	sdeB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit SdeB
+sdeY	RND-IM	sdeY	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit SdeY
+sea	VIRULENCE_Saur	sea	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type A
+seb	VIRULENCE_Saur	seb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type B
+sec1	VIRULENCE_Saur	sec1	-	0.00	0.00	98.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C1
+sec2	VIRULENCE_Saur	sec2	-	0.00	0.00	98.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C2
+sec3	VIRULENCE_Saur	sec3	-	0.00	0.00	96.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C3
+sed	VIRULENCE_Saur	sed	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type D
+see	VIRULENCE_Saur	see	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type E
+seh	VIRULENCE_Saur	seh	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type H
+sei	VIRULENCE_Saur	sei	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type I
+sej	VIRULENCE_Saur	sej	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type J
+sek	VIRULENCE_Saur	sek	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type K
+sel26	VIRULENCE_Saur	sel26	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 26
+sel27	VIRULENCE_Saur	sel27	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 27
+sel28	VIRULENCE_Saur	sel28	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 28
+sel30	VIRULENCE_Saur	sel30	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 30
+sel31	VIRULENCE_Saur	sel31	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 31
+sel32	VIRULENCE_Saur	sel32	-	0.00	0.00	97.00	90.00	90.00	97.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 32
+sel33	VIRULENCE_Saur	sel33	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 33
+selV	VIRULENCE_Saur	selV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type V
+selX	VIRULENCE_Saur	selX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin-like toxin X
+selZ	VIRULENCE_Saur	selZ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Z
+sel	VIRULENCE_Saur	sel	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type L
+sem	VIRULENCE_Saur	sem	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type M
+senB	VIRULENCE_Ecoli	senB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterotoxin production-related protein TieB
+sen	VIRULENCE_Saur	sen	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type N
+seo	VIRULENCE_Saur	seo	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type O
+sepA	auto_tox	sepA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin SepA
+sep	VIRULENCE_Saur	sep	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type P
+sequest	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein
+seq	VIRULENCE_Saur	seq	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Q
+ser	VIRULENCE_Saur	ser	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type R
+ses	VIRULENCE_Saur	ses	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type S
+set	VIRULENCE_Saur	set	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type T
+seu	VIRULENCE_Saur	seu	-	0.00	0.00	91.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type U
+sey	VIRULENCE_Saur	sey	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Y
+sfaF	VIRULENCE_Ecoli	sfaF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			S/F1C fimbrial biogenesis usher protein SfaF/FocD
+sfaS	VIRULENCE_Ecoli	sfaS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			S-fimbrial adhesin minor subunit SfaS
+sgm	rmt	sgm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	Sgm family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+sigA	auto_tox	sigA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin SigA
+silA	METAL-RND-IM	silA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA
+silB	cusB_gen	silB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB
+silC	METAL	silC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
+silE	METAL	silE	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	METAL	SILVER	SILVER	silver-binding protein SilE
+silF	METAL	silF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF
+silP	P-type_ATPase	silP	-	0.00	0.00	84.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	SILVER	SILVER	Ag(+)-translocating P-type ATPase SilP
+silR	copR_gen	silR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver response regulator transcription factor SilR
+silS	METAL	silS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver sensor histidine kinase SilS
+sinH	VIRULENCE_Ecoli	sinH	NF033423.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			intimin-like inverse autotransporter SinH
+smdA	BIOCIDE	smdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
+smdB	BIOCIDE	smdB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
+smeF	RND-OM	smeF	-	0.00	0.00	84.00	90.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane subunit SmeF
+smfY	MFS_efflux	smfY	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter SmfY
+spd	ant(9)	spd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase Spd
+splA	VIRULENCE_Saur	splA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplA
+splB	VIRULENCE_Saur	splB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplB
+splE	VIRULENCE_Saur	splE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplE
+spw	ant(9)	spw	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase Spw
+srm(B)	abcf-produ	srm(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Srm(B)
+srpA	RND-peri	srpA	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter periplasmic adaptor subunit SrpA
+srpB	RND-IM	srpB	-	0.00	0.00	89.00	90.00	90.00	93.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter permease subunit SrpB
+srpC	RND-OM	ttgI	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter outer membrane subunit SrpC
+srpR	BIOCIDE	srpR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	solvent efflux transporter antirepressor SrpR
+srpS	BIOCIDE	srpS	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	solvent efflux transporter transcriptional repressor SrpS
+sslE	VIRULENCE_Ecoli	sslE	NF037973.1	3000.00	3000.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			lipoprotein metalloprotease SslE
+ssmE	SMR_efflux	ssmE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux SMR transporter SsmE
+sta1	VIRULENCE_Ecoli	sta1	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin ST-I group a
+sta	sat	sta	NF000487.1	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase STAT
+stb	VIRULENCE_Ecoli	stb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin ST-II
+str	ant(6)	str	NF000062.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	streptomycin adenylyltransferase Str
+stxA1a	stxA1	stxA1a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1A	Shiga toxin Stx1a subunit A
+stxA1c	stxA1	stxA1c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1C	Shiga toxin Stx1c subunit A
+stxA1d	stxA1	stxA1d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1D	Shiga toxin Stx1d subunit A
+stxA1	stxA	stxA1	NF033658.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1	Shiga toxin Stx1 subunit A
+stxA2a	stxA2	stxA2a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2A	Shiga toxin Stx2a subunit A
+stxA2b	stxA2	stxA2b	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2B	Shiga toxin Stx2b subunit A
+stxA2c	stxA2	stxA2c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2C	Shiga toxin Stx2c subunit A
+stxA2d	stxA2	stxA2d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2D	Shiga toxin Stx2d subunit A
+stxA2e	stxA2	stxA2e	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2E	Shiga toxin Stx2e subunit A
+stxA2f	stxA2	stxA2f	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2F	Shiga toxin Stx2f subunit A
+stxA2g	stxA2	stxA2g	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2G	Shiga toxin Stx2g subunit A
+stxA2	stxA	stxA2	NF033661.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2	Shiga toxin Stx2 subunit A
+stxA	stx	stxA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin subunit A
+stxB1a	stxB1	stxB1a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1A	Shiga toxin Stx1a subunit B
+stxB1c	stxB1	stxB1c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1C	Shiga toxin Stx1c subunit B
+stxB1d	stxB1	stxB1d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1D	Shiga toxin Stx1d subunit B
+stxB1	stxB	stxB1	NF033659.0	175.00	175.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1	Shiga toxin Stx1 subunit B
+stxB2a	stxB2	stxB2a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2A	Shiga toxin Stx2a subunit B
+stxB2b	stxB2	stxB2b	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2B	Shiga toxin Stx2b subunit B
+stxB2c	stxB2	stxB2c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2C	Shiga toxin Stx2c subunit B
+stxB2d	stxB2	stxB2d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2D	Shiga toxin Stx2d subunit B
+stxB2e	stxB2	stxB2e	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2E	Shiga toxin Stx2e subunit B
+stxB2f	stxB2	stxB2f	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2F	Shiga toxin Stx2f subunit B
+stxB2g	stxB2	stxB2g	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2G	Shiga toxin Stx2g subunit B
+stxB2	stxB	stxB2	NF033660.0	165.00	165.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2	Shiga toxin Stx2 subunit B
+stxB	stx	stxB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin subunit B
+stx	VIRULENCE_Ecoli	stx	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin
+subA	VIRULENCE_Ecoli	subA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			subtilase AB5 cytotoxin subunit A
+subB	VIRULENCE_Ecoli	subB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			subtilase AB5 cytotoxin subunit B
+sul1	sul	sul1	NF000294.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul1
+sul2	sul	sul2	NF000295.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul2
+sul3	sul	sul3	NF000296.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul3
+sul4	sul	sul4	NF033502.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul4
+sulR	AMR	sulR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	flavin reductase SulR
+sulX	AMR	sulX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide monooxygenase SulX
+sul	AMR	sul	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase
+taeA	abc-f	taeA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PLEUROMUTILIN	TIAMULIN	ABC-F type ribosomal protection protein TaeA
+tbtA	RND-peri	tbtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit TbtA
+tbtB	RND-IM	tbtB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TbtB
+tbtM	adeC-K-oprM	tbtM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane channel subunit TbtM
+tbtR	BIOCIDE	tbtR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	tribuytltin resistance regulator TbtR
+tccP2	VIRULENCE_Ecoli	tccP	-	0.00	0.00	94.00	80.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Tir-cytoskeleton coupling protein TccP2
+tccP	VIRULENCE_Ecoli	tccP	-	0.00	0.00	94.00	80.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Tir-cytoskeleton coupling protein TccP
+tcdA	tcd_gen	tcdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TcdA
+tcdB	tcd_gen	tcdB	-	0.00	0.00	85.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TcdB
+tcdC	VIRULENCE_Cdiff	tcdC	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin anti-sigma factor TcdC
+tcdE	VIRULENCE_Cdiff	tcdE	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			holin-like glycosylating toxin export protein TcdE
+tcdR	VIRULENCE_Cdiff	tcdR	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin sigma factor TcdR
+tcd_gen	VIRULENCE_Cdiff	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			glycosylating toxin
+tcmA	MFS_efflux	tcmA	NF000025.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACENOMYCIN	TETRACENOMYCIN	tetracenomycin C efflux MFS transporter
+tcr3	tet_MFS_efflux	tcr3	NF000009.1	1000.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tcr3
+tcrB	P-type_ATPase	tcrB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-translocating P-type ATPase TcrB
+terB	METAL	terB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerB
+terC	METAL	terC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerC
+terD	METAL	terD	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerD
+terE	METAL	terE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance cAMP binding protein TerE
+terW	METAL	terW	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance protein TerW
+terZ	METAL	terZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance-associated protein TerZ
+tet(30)	tet_A_B_C_D	tet(30)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(30)
+tet(31)	tet_A_B_C_D	tet(31)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(31)
+tet(32)	tet(M-W-O-S)	tet(32)	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	75.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(32)
+tet(33)	tet_A_B_C_D	tet(33)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(33)
+tet(34)	tet	tet(34)	NF000014.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	oxytetracycline resistance phosphoribosyltransferase domain-containing protein Tet(34)
+tet(35)	tet	tet(35)	NF000013.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux Na+/H+ antiporter family transporter Tet(35)
+tet(36)	tet_rib_protect	tet(36)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(36)
+tet(37)	tet	tet(37)	NF000059.1	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)
+tet(38)	tet_MFS_efflux	tet(38)	NF012176.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(38)
+tet(39)	tet_A_B_C_D	tet(39)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(39)
+tet(40)	tet_MFS_efflux	tet(40)	NF000049.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(40)
+tet(41)	tet_A_B_C_D	tet(41)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(41)
+tet(42)	tet_MFS_efflux	tet(42)	NF012177.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(42)
+tet(43)	tet_MFS_efflux	tet(43)	NF012180.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(43)
+tet(44)	tet(M-W-O-S)	tet(44)	-	0.00	0.00	93.00	90.00	90.00	94.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(44)
+tet(45)	tet_L_K_45	tet(45)	NF012184.0	975.00	975.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(45)
+tet(47)	tet_destruct	tet(47)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(47)
+tet(48)	tet_destruct	tet(48)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(48)
+tet(49)	tet_destruct	tet(49)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(49)
+tet(50)	tet_destruct	tet(50)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(50)
+tet(51)	tet_destruct	tet(51)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(51)
+tet(52)	tet_destruct	tet(52)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(52)
+tet(53)	tet_destruct	tet(53)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(53)
+tet(54)	tet_destruct	tet(54)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(54)
+tet(55)	tet_destruct	tet(55)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(55)
+tet(56)	tet_destruct	tet(56)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(56)
+tet(57)	tet_A_B_C_D	tet(57)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(57)
+tet(59)	tet_A_B_C_D	tet(59)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(59)
+tet(62)	tet_A_B_C_D	tet(62)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(62)
+tet(63)	tet_L_K_45	tet(63)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(63)
+tet(64)	tet_A_B_C_D	tet(64)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(64)
+tet(A)	tet_A_B_C_D	tet(A)	NF012193.0	840.00	840.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(A)
+tet(B)	tet_A_B_C_D	tet(B)	NF012190.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(B)
+tet(C)	tet_A_B_C_D	tet(C)	NF012191.0	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(C)
+tet(D)	tet_A_B_C_D	tet(D)	NF012186.0	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(D)
+tet(E)	tet_A_B_C_D	tet(E)	NF012187.0	820.00	820.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(E)
+tet(G)	tet_A_B_C_D	tet(G)	NF012192.0	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(G)
+tet(H)	tet(H-J)	tet(H)	NF012195.0	840.00	840.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(H)
+tet(H-J)	tet_A_B_C_D	tet(H-J)	NF012207.0	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(H)/Tet(J) family tetracycline efflux MFS transporter
+tet(J)	tet(H-J)	tet(J)	NF012194.0	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(J)
+tet(K)	tet_L_K_45	tet(K)	NF012183.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(K)
+tet(L)	tet_L_K_45	tet(L)	NF012185.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(L)
+tet(M)	tet(M-W-O-S)	tet(M)	NF012155.1	1420.00	1420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(M)
+tet(M-W-O-S)	tet_rib_protect	tet_rib_protect	NF033148.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
+tet(O)	tet(M-W-O-S)	tet(O)	-	0.00	0.00	91.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(O)
+tet(O/32/O)	tet(M-W-O-S)	tet(O/32/O)	-	0.00	0.00	97.50	95.00	95.00	97.50	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/32/O)
+tet(O/M/O)	tet(M-W-O-S)	tet(O/M/O)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/M/O)
+tet(O/W)	tet(M-W-O-S)	tet(O/W)	-	0.00	0.00	99.00	98.00	98.00	99.00	98.00	98.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W)
+tet(O/W/32/O)	tet(M-W-O-S)	tet(O/W/32/O)	-	0.00	0.00	97.00	95.00	95.00	98.00	95.00	85.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/32/O)
+tet(O/W/O)	tet(M-W-O-S)	tet(O/W/O)	-	0.00	0.00	97.50	95.00	95.00	97.50	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/O)
+tet(Q)	tet_rib_protect	tet(Q)	NF012154.0	1425.00	1425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(Q)
+tet(S)	tet(M-W-O-S)	tet(S)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(S)
+tet(T)	tet_rib_protect	tet(T)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(T)
+tet(V)	tet_MFS_efflux	tet(V)	NF012178.0	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(V)
+tet(W)	tet(M-W-O-S)	tet(W)	-	0.00	0.00	94.00	90.00	90.00	97.00	90.00	75.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(W)
+tet(W/32/O)	tet(M-W-O-S)	tet(W/32/O)	-	0.00	0.00	99.00	97.00	97.00	99.00	97.00	97.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(W/32/O)
+tet(W/N/W)	tet(M-W-O-S)	tet(W/N/W)	-	0.00	0.00	96.00	95.00	95.00	96.00	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(W/N/W)
+tet(X)	tet	tet(X)	NF033111.2	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X)
+tet(X1)	tet(X)	tet(X1)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X1)
+tet(X2)	tet(X)	tet(X2)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X2)
+tet(X3)	tet(X)	tet(X3)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X3)
+tet(X4)	tet(X)	tet(X4)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X4)
+tet(X5)	tet(X)	tet(X5)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X5)
+tet(Y)	tet_A_B_C_D	tet(Y)	NF012188.1	820.00	820.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(Y)
+tet(Z)	tet_A_B_C_D	tet(Z)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(Z)
+tetA(46)	tet	tetA(46)	NF000474.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(46) subunit A
+tetA(58)	tet	tetA(58)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(58) subunit A
+tetA(60)	tet	tetA(60)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(60) subunit A
+tetA(D)	tet_A_B_C_D	tetA(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(D)-related tetracycline efflux MFS transporter
+tetA(P)	tet_MFS_efflux	tetA(P)	NF000043.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter TetA(P)
+tetAB_A	tetAB	tetA	NF000506.1	1025.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB subunit A
+tetAB_B	tetAB	tetAB_B	NF000103.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB subunit B
+tetAB	tet	tetAB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB
+tetB(46)	tet	tetB(46)	NF000475.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(46) subunit B
+tetB(58)	tet	tetB(58)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(58) subunit B
+tetB(60)	tet	tetB(60)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(60) subunit B
+tetB(P)	tet_rib_protect	tetB(P)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein TetB(P)
+tet_A_B_C_D	tet_MFS_efflux	tet	NF012174.0	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter
+tet_L_K_45	tet_MFS_efflux	tet	NF012175.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(L)/Tet(K)/Tet(45) family tetracycline efflux MFS transporter
+tet_MFS_efflux	MFS_efflux	tet	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter
+tet_destruct	tet	tet	NF033476.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase
+tet_rib_protect	tet	tet	NF012153.1	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein
+tet	AMR	tet	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance protein
+tir	VIRULENCE_Ecoli	tir	NF033637.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocated intimin receptor Tir
+tlmB	blmB_tlmB	tlmB	NF000485.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase TlmB
+tlr(C)	abcf-produ	tlr(C)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Tlr(C)
+tmexC	RND-peri	tmexC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux RND transporter periplasmic adaptor subunit TMexC
+tmexD	RND-IM	tmexD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux RND transporter permease subunit TMexD
+toprJ	RND-OM	toprJ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux transporter outer membrane subunit TOprJ
+toxB	VIRULENCE_Ecoli	toxB	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			toxin B
+tpeL	VIRULENCE_Cperf	tpeL	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TpeL
+tsh	hbp_auto	tsh	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			temperature-sensitive protease autotransporter hemagglutinin Tsh
+tsnR	nshR_tsnR	tsnR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	23S rRNA (adenine(1067)-N)-methyltransferase TsnR
+tst	VIRULENCE_Saur	tst	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			toxic shock syndrome toxin TSST-1
+ttgA	RND-peri	ttgA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	toluene efflux RND transporter periplasmic adaptor subunit TtgA
+ttgB	RND-IM	ttgB	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TtgB
+ttgD	RND-peri	ttgD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	toluene efflux RND transporter periplasmic adaptor subunit TtgD
+ttgE	RND-IM	ttgE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TtgE
+ttgR	BIOCIDE	ttgR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	efflux transport transcriptional regulator TtgR
+ttgT	BIOCIDE	ttgT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	efflux transport transcriptional regulator TtgT
+tva(A)	abc-f	tva(A)	-	0.00	0.00	88.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN/STREPTOGRAMIN	ABC-F type ribosomal protection protein Tva(A)
+tva(B)	abc-f	tva(B)	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	2	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN/STREPTOGRAMIN	ABC-F type ribosomal protection protein Tva(B)
+vac_auto	auto_tox	vactox	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			vacuolating autotransporter toxin Vat
+vanA-Ao2	vanA-all	vanA-Ao2	NF000092.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Ao2
+vanA-Pa	vanA-all	vanA-Pa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pa
+vanA-Pt2	vanA-all	vanA-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pt2
+vanA-Pt	vanA-all	vanA-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pt
+vanA-Sc	vanA-all	vanA-Sc	NF000129.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Sc
+vanA-all	AMR	vanA	NF000206.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase
+vanA	vanA-all	vanA	NF012217.1	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA
+vanB	vanA-all	vanB	NF012216.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanB
+vanC-all	AMR	vanC	NF000207.3	520.00	520.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase
+vanC1	vanC	vanC	NF012213.0	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC1
+vanC2/3	vanC	vanC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC2/3
+vanC	vanC-all	vanC	NF012214.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC
+vanD	vanA-all	vanD	NF012215.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanD
+vanE	vanC-all	vanE	NF000036.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanE
+vanF	vanA-all	vanF	NF000144.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanF
+vanG-Cd	vanG	vanG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG-Cd
+vanG2	vanG	vanG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG2
+vanG	AMR	vanG	NF000091.3	495.00	495.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG
+vanH-Ac1	vanH-Amyco	vanH-Ac1	NF000151.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ac1
+vanH-Amyco	vanH	vanH	NF000112.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanH-AOV family D-lactate dehydrogenase
+vanH-Ao1	vanH-Amyco	vanH-Ao1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ao1
+vanH-Ao2	vanH-Amyco	vanH-Ao2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ao2
+vanH-A	vanH_group_A_Pt	vanH-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-A
+vanH-B	vanH	vanH-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-B
+vanH-D	vanH	vanH-D	NF000004.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-D
+vanH-F	vanH	vanH-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-F
+vanH-M	vanH	vanH-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-M
+vanH-O	vanH	vanH-O	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-O
+vanH-Pt2	vanH_group_A_Pt	vanH-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Pt2
+vanH-Pt	vanH_group_A_Pt	vanH-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Pt
+vanH-Sc	vanH	vanH-Sc	NF000128.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Sc
+vanH_group_A_Pt	vanH	vanH	NF000371.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanH-A/VanH-Pt family D-lactate dehydrogenase
+vanH	AMR	vanH	NF000492.1	540.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH
+vanI	vanA-all	vanI	NF000372.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanI
+vanJ	AMR	vanJ	NF000373.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	teicoplanin resistance protein VanJ
+vanK-I	vanK	vanK-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	peptidoglycan bridge formation peptidyltransferase VanK-I
+vanK-Sc	vanK	vanK-Sc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	peptidoglycan bridge formation peptidyltransferase VanK-Sc
+vanK	AMR	vanK	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanK family peptidoglycan bridge formation peptidyltransferase
+vanL	vanC-all	vanL	NF000032.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanL
+vanM	vanA-all	vanM	NF000470.1	760.00	760.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanM
+vanN	vanC-all	vanN	NF000093.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanN
+vanO	vanA-all	vanO	NF000374.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanO
+vanR-ABDEGLN	vanR_gen	vanR	NF033117.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanR-ABDEGLN family response regulator transcription factor
+vanR-A	vanR-ABDEGLN	vanR-A	NF000401.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanA-type vancomycin resistance DNA-binding response regulator VanR
+vanR-B	vanR_gen	vanR-B	NF000402.1	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanB-type vancomycin resistance response regulator transcription factor VanR
+vanR-Cd	vanR-ABDEGLN	vanR-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-Cd-type vancomycin resistance DNA-binding response regulator VanR
+vanR-C	vanR-ABDEGLN	vanR-C	NF000403.1	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanC-type vancomycin resistance DNA-binding response regulator VanR
+vanR-D	vanR-ABDEGLN	vanR-D	NF000404.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanD-type vancomycin resistance DNA-binding response regulator VanR
+vanR-E	vanR-ABDEGLN	vanR-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanE-type vancomycin resistance DNA-binding response regulator VanR
+vanR-FM	vanR_gen	vanR	NF033120.0	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanR-FM family response regulator transcription factor
+vanR-F	vanR-FM	vanR-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanF-type vancomycin resistance DNA-binding response regulator VanR
+vanR-G	vanR-ABDEGLN	vanR-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-type vancomycin resistance DNA-binding response regulator VanR
+vanR-I	vanR-ABDEGLN	vanR-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanI-type vancomycin resistance DNA-binding response regulator VanR
+vanR-L	vanR-ABDEGLN	vanR-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanL-type vancomycin resistance DNA-binding response regulator VanR
+vanR-M	vanR-FM	vanR-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanM-type vancomycin resistance DNA-binding response regulator VanR
+vanR-N	vanR-ABDEGLN	vanR-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanN-type vancomycin resistance DNA-binding response regulator VanR
+vanR-O	vanR_gen	vanR-O	NF033118.1	505.00	505.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanO-type vancomycin resistance response regulator transcription factor VanR
+vanR-Sc	vanR_gen	vanR-Sc	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanSc-type vancomycin resistance response regulator transcription factor VanR
+vanR_gen	RESPONSE_REG	vanR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance response regulator transcription factor VanR
+vanS-A	vanS_ACDEFG	vanS-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanA-type vancomycin resistance histidine kinase VanS
+vanS-B	vanS_gen	vanS-B	NF033090.1	920.00	920.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanB-type vancomycin resistance histidine kinase VanS
+vanS-Cd	vanS_ACDEFG	vanS-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-Cd-type vancomycin resistance histidine kinase VanS
+vanS-C	vanS_ACDEFG	vanS-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanC-type vancomycin resistance histidine kinase VanS
+vanS-D	vanS_ACDEFG	vanS-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanD-type vancomycin resistance histidine kinase VanS
+vanS-E	vanS_ACDEFG	vanS-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanE-type vancomycin resistance histidine kinase VanS
+vanS-F	vanS_ACDEFG	vanS-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanF-type vancomycin resistance histidine kinase VanS
+vanS-G	vanS_ACDEFG	vanS-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-type vancomycin resistance histidine kinase VanS
+vanS-L	vanS_ACDEFG	vanS-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanL-type vancomycin resistance histidine kinase VanS
+vanS-M	vanS_ACDEFG	vanS-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanM-type vancomycin resistance histidine kinase VanS
+vanS-N	vanS_ACDEFG	vanS-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanN-type vancomycin resistance histidine kinase VanS
+vanS-O	vanS_gen	vanS-O	NF033094.0	720.00	720.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanO-type vancomycin resistance histidine kinase VanS
+vanS-Pt2	vanS_ACDEFG	vanS-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanPt2-type vancomycin resistance histidine kinase VanS
+vanS-Pt	vanS_ACDEFG	vanS-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanPt-type vancomycin resistance histidine kinase VanS
+vanS-Sc	vanS_gen	vanS-Sc	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanSc-type vancomycin resistance histidine kinase VanS
+vanS_ACDEFG	vanS_gen	vanS	NF033091.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance histidine kinase VanS
+vanS_gen	AMR	vanS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance histidine kinase VanS
+vanT-Cd	vanT-G_fam	vanT-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-Cd
+vanT-C	vanT_CELN	vanT-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-C
+vanT-E	vanT_CELN	vanT-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-E
+vanT-G_fam	vanT_all	vanT	NF033131.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanT-G-like membrane-bound serine racemase
+vanT-G	vanT-G_fam	vanT-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-G
+vanT-N	vanT_CELN	vanT-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-N
+vanT_CELN	vanT_all	vanT	NF033132.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanT_all	AMR	vanT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTc2	vanT_CELN	vanTc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTc3	vanT_CELN	vanTc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTm-L	vanT_all	vanTm	NF000033.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	serine racemase VanT-L membrane subunit
+vanTr-L	vanT_all	vanTr	NF033133.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	serine racemase VanT-L catalytic subunit
+vanU-G	vanU	vanU-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance transcriptional regulator VanU-G
+vanU	AMR	vanU	NF000090.1	150.00	150.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance transcriptional regulator VanU
+vanW-B	vanW	vanW-B	NF033122.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-B
+vanW-G	vanW	vanW-G	NF033123.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-G
+vanW-I	vanW	vanW-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-I
+vanW-Pt	vanW	vanW-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-Pt
+vanW	AMR	vanW	NF033128.2	365.00	365.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW
+vanX-Ac1	vanX	vanX-Ac1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ac1
+vanX-Ao1	vanX	vanX-Ao1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ao1
+vanX-Ao2	vanX	vanX-Ao2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ao2
+vanX-A	vanX	vanX-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-A
+vanX-B	vanX	vanX-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-B
+vanX-D	vanX	vanX-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-D
+vanX-F	vanX	vanX-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-F
+vanX-I	vanX	vanX-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-I
+vanX-M	vanX	vanX-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-M
+vanX-O	vanX	vanX-O	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-O
+vanX-Pt	vanX	vanX-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Pt
+vanX-Sc	vanX	vanX-Sc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Sc
+vanXY-C	vanXY	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY-E	vanXY	vanXY-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-E
+vanXY-G2	vanXY-G_fam	vanXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G2
+vanXY-G_fam	vanXY	vanXY	NF000149.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G
+vanXY-G	vanXY-G_fam	vanXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G
+vanXY-L	vanXY	vanXY-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-L
+vanXY-N	vanXY	vanXY-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-N
+vanXY-c2/3	vanXY-C	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY-c4	vanXY-C	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY	AMR	vanXY	NF000380.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D,D-carboxypeptidase/D,D-dipeptidase VanXY
+vanX	AMR	vanX	NF033115.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX
+vanY-A	vanY_AFMPt	vanY-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-A
+vanY-B	vanY_BG	vanY-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-B
+vanY-D	AMR	vanY-D	NF000471.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	transpeptidase-like D-Ala-D-Ala carboxypeptidase VanY-D
+vanY-F	vanY_AFMPt	vanY-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-F
+vanY-G1	vanY_BG	vanY-G1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-G1
+vanY-G	vanY_BG	vanY-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-G
+vanY-N	vanY	vanY-N	NF000086.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D,D-peptidase/D,D-carboxypeptidase VanY-N
+vanY-Pt	vanY_AFMPt	vanY-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-Pt
+vanY_AFMPt	vanY	vanY	NF000472.1	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase
+vanY_BG	vanY	vanY	NF000473.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanY-B/VanY-G family D-Ala-D-Ala carboxypeptidase
+vanY	AMR	vanY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY
+vanZ-A	vanZ	vanZ-A	NF033125.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-A
+vanZ-F	vanZ	vanZ-F	NF000145.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-F
+vanZ-Pt	vanZ	vanZ-Pt	NF000142.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-Pt
+vanZ1	vanZ	vanZ1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ1
+vanZ	AMR	vanZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ
+varG	bla-B	varG	NF033574.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VarG family subclass B1-like metallo-beta-lactamase
+vat(A)	vat	vat(A)	NF000101.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(A)
+vat(B)	vat	vat(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(B)
+vat(C)	vat	vat(C)	NF000097.1	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(C)
+vat(D)	vat	vat(D)	NF000111.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(D)
+vat(E)	vat	vat(E)	NF000020.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(E)
+vat(F)	vat	vat(F)	NF000147.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(F)
+vat(H)	vat	vat(H)	NF000504.1	475.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(H)
+vat(I)	vat	vatI	NF033468.1	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(I)
+vat	AMR	vat	NF000311.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	Vat family streptogramin A O-acetyltransferase
+vga(A)	vga	vga(A)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(A)
+vga(B)	vga	vga(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(B)
+vga(C)	vga	vga(C)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(C)
+vga(D)	vga	vga(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(D)
+vga(E)	vga	vga(E)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(E)
+vga	abc-f	vga	NF000170.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Vga family ABC-F type ribosomal protection protein
+vgb(A)	vgb	vgb(A)	NF000022.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(A)
+vgb(B)	vgb	vgb(B)	NF000096.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(B)
+vgb(C)	vgb	vgbC	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(C)
+vgb	AMR	vgb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase
+virF	VIRULENCE_Ecoli	virF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AraC family invasion system transcriptional regulator VirF
+vmlR	abc-f	vmlR	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	MACROLIDE/PLEUROMUTILIN	LINCOSAMIDE/STREPTOGRAMIN/TIAMULIN	ABC-F type ribosomal protection protein VmlR
+vph	AMR	vph	NF000088.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TUBERACTINOMYCIN	VIOMYCIN	viomycin phosphotransferase
+ybtP	VIRULENCE	ybtP	-	0.00	0.00	85.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			yersiniabactin ABC transporter ATP-binding/permease protein YbtP
+ybtQ	VIRULENCE	ybtQ	-	0.00	0.00	85.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			yersiniabactin ABC transporter ATP-binding/permease protein YbtQ
+yfeA	VIRULENCE	yfeA	-	0.00	0.00	83.00	90.00	90.00	88.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter substrate-binding protein YfeA
+yfeB	VIRULENCE	yfeB	-	0.00	0.00	86.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter ATP-binding protein YfeB
+yfeD	VIRULENCE	yfeD	-	0.00	0.00	88.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter permease subunit YfeD
+zbmA	ble	zbmA	NF000479.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	ZORBAMYCIN	zorbamycin binding protein ZbmA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/taxgroup.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/taxgroup.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	gpipe_taxgroup	number_of_nucl_ref_genes
+Acinetobacter_baumannii	Acinetobacter	0
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/amrfinderplus-db/2021-09-30.1/version.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/amrfinderplus-db/2021-09-30.1/version.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+2021-09-30.1
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/antifam.h3f
Binary file test-data/test-db/antifam.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/antifam.h3i
Binary file test-data/test-db/antifam.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/antifam.h3m
Binary file test-data/test-db/antifam.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/antifam.h3p
Binary file test-data/test-db/antifam.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/bakta.db
Binary file test-data/test-db/bakta.db has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/expert-protein-sequences.dmnd
Binary file test-data/test-db/expert-protein-sequences.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-genes.i1f
Binary file test-data/test-db/ncRNA-genes.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-genes.i1i
Binary file test-data/test-db/ncRNA-genes.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-genes.i1m
Binary file test-data/test-db/ncRNA-genes.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-genes.i1p
Binary file test-data/test-db/ncRNA-genes.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-regions.i1f
Binary file test-data/test-db/ncRNA-regions.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-regions.i1i
Binary file test-data/test-db/ncRNA-regions.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-regions.i1m
Binary file test-data/test-db/ncRNA-regions.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/ncRNA-regions.i1p
Binary file test-data/test-db/ncRNA-regions.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/oric.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/oric.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>ORI10010001
+TATTCTTCTATAACATTGTCAAGAATGATAGTTAAAATTCTCGAAATTGGGATATTAACTGCTTTGGAGTAATTTCTAACTTTTTGTCATACTCTTTGACTTGTATAGAAGTGTACACCTGTATCTAGTTTTTCTTGGCGTTCAACAGGAACTATTCCTGGTATTTTTGTTTTAGGTTGGGGAGGAATAGGCTGTGGTTGTGTGAATTGTTGTTGAAAATTTTGATTTTTTTGCTGTAAGAAACCATTATTATGATATTGAAAATTTTGTTCCTCTTGAAAATATCTCTCTTTTTTTGGTTTTCCAGAAAAATTTGATGAAAAAGATTTTTCTTCATTTCAATTTTCAAGATTATTTTCATTTTGTTGATTTATTTGCTCAGGCTGTTGAAATGAATTATTTTTTGATCAAAAAGATTTTGGAAAGGTTTTTTCAAAAGCAGATAAAGGTCCAAAATCAAATGAAGATGAATCTTTGTCAAAAGATGTTTCTTCTCTTTTTGACAAATTTTGTTTTTGATTAAACTTATTTTTATTTTGGGGTGTTACTTTTTCTTTTATGGAAAACAAATCTTCTTCTAAAAGACTTTGTTCTGGGTCATCATCTTGTGCTAAATCAAAGAAAAAACGTTTCTTTTTGTTA
+>ORI10010003
+GGCGTAGACACTGAATTCGATGGGGATAAGTGGTGGATAAAAGAATATAAATTAGTCATTACACTTTACTCACGAATATCCCCCTTTTTTTAGAGAAAAAATATACTTTCTTCACAAGCTTGTGTGCGGTTTTTGTTTGGTAATTCTCGAGACATAAGCACTTATCCAGATATTCACAGTTACTATTATGTGATACGACTACATTCTTTATACTTATAAGATTAATAAGGAGGAAACTAACT
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/orit.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/orit.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>CP019995|MOBP
+GTAGAATCGTTTAGTATGAGAATAGAAAACCAACGGTTTTCATGAACTTACTAAACGATTCTAC
+>CP012386|MOBP
+AGAACAATCAACAACTAATTAGGCAAATTAAGGGGTGCTAAACAACTGCTAGTAGGTGCTAGAGATGTGCTATAAAGGGTGCTAGTTTGGTGCTAGTTACTGCTAAATACGTGCTAGTTTAGGTGCTAGAAACGTGCTATATGGTGCTAAAAAGGTGCTAGTTTGCATGAAGTTACCTGCTAGCCAAGTGCTAGTGGCGTTCGTTTTTGGGTCCCACGGGAAAGCCTTGCACTGCAAGGCGGGTCAGCTTGTCTGACCCCCATTTCCCCTTATGCTCTTCCGAAACACAAAGCGCAATTAAGCGAATACTAGAGAATAAATA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/pfam.h3f
Binary file test-data/test-db/pfam.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/pfam.h3i
Binary file test-data/test-db/pfam.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/pfam.h3m
Binary file test-data/test-db/pfam.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/pfam.h3p
Binary file test-data/test-db/pfam.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/psc.dmnd
Binary file test-data/test-db/psc.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/rRNA.i1f
Binary file test-data/test-db/rRNA.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/rRNA.i1i
Binary file test-data/test-db/rRNA.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/rRNA.i1m
Binary file test-data/test-db/rRNA.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/rRNA.i1p
Binary file test-data/test-db/rRNA.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/rfam-go.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/rfam-go.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+Rfam:RF00001	GO:0003735
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/sorf.dmnd
Binary file test-data/test-db/sorf.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test-db/version.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/version.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,53 @@
+{
+  "date": "2021-08-9",
+  "major": 3,
+  "minor": 0,
+  "dependencies": [
+    {
+      "name": "AMRFinderPlus",
+      "release": "2020-09-22.2"
+    },
+    {
+      "name": "COG",
+      "release": "2014"
+    },
+    {
+      "name": "DoriC",
+      "release": "10"
+    },
+    {
+      "name": "ISFinder",
+      "release": "2019-09-25"
+    },
+    {
+      "name": "Mob-suite",
+      "release": "2.0"
+    },
+    {
+      "name": "Pfam",
+      "release": "33.1"
+    },
+    {
+      "name": "RefSeq",
+      "release": "r202"
+    },
+    {
+      "name": "Rfam",
+      "release": "14.2"
+    },
+    {
+      "name": "UniProtKB/Swiss-Prot",
+      "release": "2020_04"
+    }
+  ],
+  "experts": [
+    {
+      "name": "AMRFinderPlus",
+      "release": "3.10.1"
+    },
+    {
+      "name": "NCBI BlastRules",
+      "release": "4.0"
+    }
+  ]
+}
diff -r 000000000000 -r 1a27ad3d0cdf test-data/test_database.loc
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_database.loc	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+# Tab separated with 4 columns:
+# - value (Galaxy records this in the Galaxy DB)
+# - name (Galaxy shows this in the UI)
+# - path (folder name containing the NCBI DB)
+test-db-bakta	"Database test"	${__HERE__}/test-db
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/NC_002127.1.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/NC_002127.1.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,20 @@
+>NC_002127.1 Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTT
+TCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCA
+TCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGT
+CTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGC
+TTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTA
+TTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAG
+GAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTA
+AGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAA
+ACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTAT
+CACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTA
+TGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGT
+TCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGA
+ATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTT
+TAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTA
+ACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATT
+AAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,87 @@
+ID   contig_1; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   contig_1;
+XX
+DE   plasmid unnamed1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 12:57:48
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="unnamed1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>contig_1 [completeness=complete] [topology=circular] [gcode=11]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,83 @@
+LOCUS       contig_1                1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid unnamed1, complete sequence.
+ACCESSION   contig_1
+VERSION     contig_1
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 12:57:48
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="unnamed1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,36 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region contig_1 1 1330
+contig_1	Bakta	region	1	1330	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
+contig_1	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein
+contig_1	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein
+##FASTA
+>contig_1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+contig_1	413	736	+	IHHALP_00005	12.1	10.4		
+contig_1	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,90 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "contig_1",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "contig_1",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "contig_1",
+            "description": "[completeness=complete] [topology=circular] [gcode=11]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "unnamed1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 12:57:47",
+        "end": "2022-08-22 12:57:48"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,90 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+predict tRNAs...
+	found: 0
+predict tmRNAs...
+	found: 0
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 22
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/2/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:01 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+contig_1	cds	413	736	+	IHHALP_00005		hypothetical protein	
+contig_1	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_1/TEST_1.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_1/TEST_1.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+ID   NC_002127; SV 1; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   NC_002127;
+XX
+DE   Escherichia coli o157:h7 Sakai plasmid pOSAK1, complete sequence
+XX
+OS   Escherichia coli o157:h7 Sakai
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 12:58:03
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /organism="Escherichia coli o157:h7 Sakai"
+FT                   /strain="Sakai"
+FT                   /plasmid="pOSAK1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=11
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>NC_002127.1 Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,85 @@
+LOCUS       NC_002127.1             1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  Escherichia coli o157:h7 Sakai plasmid pOSAK1, complete sequence.
+ACCESSION   NC_002127
+VERSION     NC_002127.1
+KEYWORDS    .
+SOURCE      Escherichia coli o157:h7 Sakai
+  ORGANISM  Escherichia coli o157:h7 Sakai
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 12:58:03
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /organism="Escherichia coli o157:h7 Sakai"
+                     /strain="Sakai"
+                     /plasmid="pOSAK1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=11
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,37 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# organism Escherichia coli o157:h7 Sakai
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region NC_002127.1 1 1330
+NC_002127.1	Bakta	region	1	1330	.	+	.	ID=NC_002127.1;Name=NC_002127.1;Is_circular=true
+NC_002127.1	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein
+NC_002127.1	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein
+##FASTA
+>NC_002127.1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+NC_002127.1	413	736	+	IHHALP_00005	12.1	10.4		
+NC_002127.1	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+{
+    "genome": {
+        "genus": "Escherichia",
+        "species": "coli o157:h7",
+        "strain": "Sakai",
+        "plasmid": "pOSAK1",
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "NC_002127.1",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "NC_002127.1",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "NC_002127.1",
+            "description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "name": "pOSAK1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 12:58:02",
+        "end": "2022-08-22 12:58:03"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,88 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 22
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/4/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+NC_002127.1	cds	413	736	+	IHHALP_00005		hypothetical protein	
+NC_002127.1	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_2/TEST_2.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_2/TEST_2.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,62 @@
+ID   contig_1; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   contig_1;
+XX
+DE   plasmid unnamed1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 12:58:17
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     0
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="unnamed1"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.faa
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.ffn
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>contig_1 [completeness=complete] [topology=circular] [gcode=11]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,58 @@
+LOCUS       contig_1                1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid unnamed1, complete sequence.
+ACCESSION   contig_1
+VERSION     contig_1
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 12:58:17
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     0
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="unnamed1"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,34 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region contig_1 1 1330
+contig_1	Bakta	region	1	1330	.	+	.	ID=contig_1;Name=contig_1;Is_circular=true
+##FASTA
+>contig_1
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,42 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 11
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.0
+    },
+    "features": [],
+    "sequences": [
+        {
+            "id": "contig_1",
+            "description": "[completeness=complete] [topology=circular] [gcode=11]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "simple_id": "contig_1",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "unnamed1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 12:58:17",
+        "end": "2022-08-22 12:58:17"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,55 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+skip rRNA prediction...
+skip ncRNA prediction...
+skip ncRNA region prediction...
+skip CRISPR array prediction...
+skip CDS prediction...
+skip sORF prediction...
+skip gap annotation...
+skip oriC/T annotation...
+apply feature overlap filters...
+select features and create locus tags...
+selected: 0
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 0.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 0
+	  hypotheticals: 0
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/6/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,3 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_3/TEST_3.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_3/TEST_3.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 0.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 0
+hypotheticals: 0
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.embl
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.embl	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,87 @@
+ID   p2; ; circular; DNA; ; PRO; 1330 BP.
+XX
+AC   p2;
+XX
+DE   plasmid pOSAK1, complete sequence
+XX
+OS   .
+OC   .
+XX
+CC   Annotated with Bakta
+CC   Software: v1.4.2
+CC   Database: v3.0
+CC   DOI: 10.1099/mgen.0.000685
+CC   URL: github.com/oschwengers/bakta
+CC   
+CC   ##Genome Annotation Summary:##
+CC   Annotation Date                :: 08/22/2022, 12:58:56
+CC   Annotation Pipeline            :: Bakta
+CC   Annotation Software version    ::  v1.4.2
+CC   Annotation Database version    ::  v3.0
+CC   CDSs                           ::     2
+CC   tRNAs                          ::     0
+CC   tmRNAs                         ::     0
+CC   rRNAs                          ::     0
+CC   ncRNAs                         ::     0
+CC   regulatory ncRNAs              ::     0
+CC   CRISPR Arrays                  ::     0
+CC   oriCs/oriVs                    ::     0
+CC   oriTs                          ::     0
+CC   gaps                           ::     0
+XX
+FH   Key             Location/Qualifiers
+FH
+FT   source          1..1330
+FT                   /mol_type="genomic DNA"
+FT                   /plasmid="pOSAK1"
+FT   gene            413..736
+FT                   /locus_tag="IHHALP_00005"
+FT   CDS             413..736
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00005"
+FT                   /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+FT                   AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+FT                   MAD"
+FT                   /codon_start=1
+FT                   /transl_table=4
+FT                   /protein_id="gnl|Bakta|IHHALP_00005"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+FT   gene            complement(join(971..1330,1..141))
+FT                   /locus_tag="IHHALP_00010"
+FT   CDS             complement(join(971..1330,1..141))
+FT                   /product="hypothetical protein"
+FT                   /locus_tag="IHHALP_00010"
+FT                   /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+FT                   EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+FT                   YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+FT                   IPI"
+FT                   /codon_start=1
+FT                   /transl_table=4
+FT                   /protein_id="gnl|Bakta|IHHALP_00010"
+FT                   /inference="ab initio prediction:Prodigal:2.6"
+XX
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
+     ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
+     gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
+     agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
+     tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt       240
+     tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt       300
+     gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac       360
+     cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa       420
+     acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga       480
+     agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt       540
+     acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga       600
+     agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga       660
+     cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag       720
+     gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt       780
+     aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga       840
+     tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc       900
+     agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc       960
+     tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa      1020
+     ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat      1080
+     cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat      1140
+     taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
+     aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
+     tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
+     cttctatttg                                                             1330
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.ffn
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.ffn	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG
+>IHHALP_00010 hypothetical protein
+ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,24 @@
+>p2 [completeness=complete] [topology=circular] [gcode=4] [plasmid-name=pOSAK1]
+TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
+GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
+AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
+TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
+TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
+GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
+CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
+ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
+AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
+ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
+AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
+CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
+GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
+AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
+TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
+AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
+TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
+GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
+CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
+TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
+AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
+TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
+CTTCTATTTG
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.gbff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.gbff	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,83 @@
+LOCUS       p2                      1330 bp    DNA     circular BCT 22-AUG-2022
+DEFINITION  plasmid pOSAK1, complete sequence.
+ACCESSION   p2
+VERSION     p2
+KEYWORDS    .
+SOURCE      None
+  ORGANISM  .
+            .
+COMMENT     Annotated with Bakta
+            Software: v1.4.2
+            Database: v3.0
+            DOI: 10.1099/mgen.0.000685
+            URL: github.com/oschwengers/bakta
+            
+            ##Genome Annotation Summary:##
+            Annotation Date                :: 08/22/2022, 12:58:56
+            Annotation Pipeline            :: Bakta
+            Annotation Software version    ::  v1.4.2
+            Annotation Database version    ::  v3.0
+            CDSs                           ::     2
+            tRNAs                          ::     0
+            tmRNAs                         ::     0
+            rRNAs                          ::     0
+            ncRNAs                         ::     0
+            regulatory ncRNAs              ::     0
+            CRISPR Arrays                  ::     0
+            oriCs/oriVs                    ::     0
+            oriTs                          ::     0
+            gaps                           ::     0
+FEATURES             Location/Qualifiers
+     source          1..1330
+                     /mol_type="genomic DNA"
+                     /plasmid="pOSAK1"
+     gene            413..736
+                     /locus_tag="IHHALP_00005"
+     CDS             413..736
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00005"
+                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
+                     AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
+                     MAD"
+                     /codon_start=1
+                     /transl_table=4
+                     /protein_id="gnl|Bakta|IHHALP_00005"
+                     /inference="ab initio prediction:Prodigal:2.6"
+     gene            complement(join(971..1330,1..141))
+                     /locus_tag="IHHALP_00010"
+     CDS             complement(join(971..1330,1..141))
+                     /product="hypothetical protein"
+                     /locus_tag="IHHALP_00010"
+                     /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
+                     EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
+                     YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
+                     IPI"
+                     /codon_start=1
+                     /transl_table=4
+                     /protein_id="gnl|Bakta|IHHALP_00010"
+                     /inference="ab initio prediction:Prodigal:2.6"
+ORIGIN
+        1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
+       61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
+      121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
+      181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
+      241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
+      301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
+      361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
+      421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
+      481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
+      541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
+      601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
+      661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
+      721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
+      781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
+      841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
+      901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
+      961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
+     1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
+     1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
+     1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
+     1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
+     1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
+     1321 cttctatttg
+//
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.gff3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.gff3	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,13 @@
+##gff-version 3
+##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
+# Annotated with Bakta
+# Software: v1.4.2
+# Database: v3.0
+# DOI: 10.1099/mgen.0.000685
+# URL: github.com/oschwengers/bakta
+##sequence-region p2 1 1330
+p2	Bakta	region	1	1330	.	+	.	ID=p2;Name=p2;Is_circular=true
+p2	Prodigal	gene	413	736	.	+	.	ID=IHHALP_00005_gene;locus_tag=IHHALP_00005
+p2	Prodigal	CDS	413	736	.	+	0	ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein;Parent=IHHALP_00005_gene;inference=ab initio prediction:Prodigal:2.6
+p2	Prodigal	gene	971	1471	.	-	.	ID=IHHALP_00010_gene;locus_tag=IHHALP_00010
+p2	Prodigal	CDS	971	1471	.	-	0	ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein;Parent=IHHALP_00010_gene;inference=ab initio prediction:Prodigal:2.6
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.hypotheticals.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.hypotheticals.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>IHHALP_00005 hypothetical protein
+MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD
+>IHHALP_00010 hypothetical protein
+MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.hypotheticals.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.hypotheticals.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta v1.4.2, https://github.com/oschwengers/bakta
+#Database v3.0, https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Start	Stop	Strand	Locus Tag	Mol Weight [kDa]	Iso El. Point	Pfam hits	Dbxrefs
+p2	413	736	+	IHHALP_00005	12.1	10.4		
+p2	971	141	-	IHHALP_00010	18.9	7.7		
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,89 @@
+{
+    "genome": {
+        "genus": null,
+        "species": null,
+        "strain": null,
+        "complete": true,
+        "gram": "?",
+        "translation_table": 4
+    },
+    "stats": {
+        "no_sequences": 1,
+        "size": 1330,
+        "gc": 0.4518796992481203,
+        "n_ratio": 0.0,
+        "n50": 1330,
+        "coding_ratio": 0.6203007518796992
+    },
+    "features": [
+        {
+            "type": "cds",
+            "contig": "p2",
+            "start": 413,
+            "stop": 736,
+            "strand": "+",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 2,
+            "aa": "MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRAAALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRLMAD",
+            "aa_hexdigest": "d9bdebc84195542e775c3d22458b507e",
+            "nt": "ATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAG",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 12072.90819999999,
+                "isoelectric_point": 10.367886161804197
+            },
+            "id": "IHHALPPJCH_1",
+            "locus": "IHHALP_00005"
+        },
+        {
+            "type": "cds",
+            "contig": "p2",
+            "start": 971,
+            "stop": 141,
+            "strand": "-",
+            "gene": null,
+            "product": "hypothetical protein",
+            "start_type": "ATG",
+            "rbs_motif": "AGGA/GGAG/GAGG",
+            "db_xrefs": [],
+            "frame": 1,
+            "aa": "MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELAEEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDRYVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKGIPI",
+            "aa_hexdigest": "1e7027cbe48346e06a83e802a9385584",
+            "edge": true,
+            "nt": "ATGAACAAGCAGCAGCAAACTGCACTCAACATGGCGGGATTCATAAAAAGCCAGAGCCTGACGCTGCTCGAAAAACTGGACGCACTCGATGCTGACGAGCAGGCCACCATGTGTGAGAAGCTGCACGAACTCGCAGAAGAACAAATAGAAGCAATAAAAAATAAAGATAAAACTTTATTTATTGTCTATGCTACTGATATTTATAGCCCGAGCGAATTTTTCTCAAAAATCGAATCCGACTTGAAGAAAAAGAAAAGCAAGGGTGATGTTTTTTTTGATTTAATAATTCCTAACGGTGGAAAAAAAGATCGTTACGTCTATACGTCATTTAATGGCGAGAAGTTTTCAAGTTACACATTAAACAAAGTTACGAAAACTGATGAATATAATGATTTATCTGAGCTCTCGGCTTCGTTCTTTAAAAAAAACTTTGATAAGATCAACGTAAACCTTCTATCCAAAGCCACATCATTTGCTTTGAAAAAAGGCATTCCAATATAA",
+            "hypothetical": true,
+            "seq_stats": {
+                "molecular_weight": 18866.325799999995,
+                "isoelectric_point": 7.696590614318848
+            },
+            "id": "IHHALPPJCH_2",
+            "locus": "IHHALP_00010"
+        }
+    ],
+    "sequences": [
+        {
+            "id": "p2",
+            "description": "[completeness=complete] [topology=circular] [gcode=4] [plasmid-name=pOSAK1]",
+            "sequence": "TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGCGTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGCAGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTGTGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATTTCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTTGCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTACCCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAAACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGAAGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTTACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGAAGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGACAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAGGCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGTAAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGATCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTCAGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTCTGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAAGGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAATCATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCATTAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAAAAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGCTCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTGCTTCTATTTG",
+            "length": 1330,
+            "complete": true,
+            "type": "plasmid",
+            "topology": "circular",
+            "orig_id": "NC_002127.1",
+            "orig_description": "Escherichia coli O157:H7 str. Sakai plasmid pOSAK1, complete sequence",
+            "name": "pOSAK1"
+        }
+    ],
+    "run": {
+        "start": "2022-08-22 12:58:54",
+        "end": "2022-08-22 12:58:56"
+    },
+    "version": {
+        "bakta": "1.4.2",
+        "db": "3.0"
+    }
+}
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,91 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+predict tRNAs...
+	found: 0
+predict tmRNAs...
+	found: 0
+predict rRNAs...
+	found: 0
+predict ncRNAs...
+	found: 0
+predict ncRNA regions...
+	found: 0
+predict CRISPR arrays...
+	found: 0
+predict & annotate CDSs...
+	predicted: 2 
+	discarded spurious: 0
+	revised translational exceptions: 0
+	detected IPSs: 0
+	found PSCs: 0
+	found PSCCs: 0
+	lookup annotations...
+	conduct expert systems...
+		amrfinder: 0
+		protein sequences: 0
+		user protein sequences: 0
+	combine annotations and mark hypotheticals...
+	analyze hypothetical proteins: 2
+	detected Pfam hits: 0 
+	calculated proteins statistics
+	revise special cases...
+extract sORF...
+	potential: 16
+	discarded due to overlaps: 2
+	discarded spurious: 0
+	detected IPSs: 0
+	found PSCs: 0
+	lookup annotations...
+	filter and combine annotations...
+	filtered sORFs: 0
+detect gaps...
+	found: 0
+detect oriCs/oriVs...
+	found: 0
+detect oriTs...
+	found: 0
+apply feature overlap filters...
+select features and create locus tags...
+selected: 2
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 62.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 2
+	  hypotheticals: 2
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/12/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	hypothetical TSV...
+	translated hypothetical CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:01 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+#Annotated with Bakta (v1.4.2): https://github.com/oschwengers/bakta
+#Database (v3.0): https://doi.org/10.5281/zenodo.4247252
+#Sequence Id	Type	Start	Stop	Strand	Locus Tag	Gene	Product	DbXrefs
+p2	cds	413	736	+	IHHALP_00005		hypothetical protein	
+p2	cds	971	141	-	IHHALP_00010		hypothetical protein	
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_4/TEST_4.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_4/TEST_4.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 62.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 2
+hypotheticals: 2
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_5/TEST_5.log
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_5/TEST_5.log	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,55 @@
+parse genome sequences...
+	imported: 1
+	filtered & revised: 1
+	plasmids: 1
+
+start annotation...
+skip tRNA prediction...
+skip tmRNA prediction...
+skip rRNA prediction...
+skip ncRNA prediction...
+skip ncRNA region prediction...
+skip CRISPR array prediction...
+skip CDS prediction...
+skip sORF prediction...
+skip gap annotation...
+skip oriC/T annotation...
+apply feature overlap filters...
+select features and create locus tags...
+selected: 0
+
+genome statistics:
+	Genome size: 1,330 bp
+	Contigs/replicons: 1
+	GC: 45.2 %
+	N50: 1,330
+	N ratio: 0.0 %
+	coding density: 0.0 %
+
+annotation summary:
+	tRNAs: 0
+	tmRNAs: 0
+	rRNAs: 0
+	ncRNAs: 0
+	ncRNA regions: 0
+	CRISPR arrays: 0
+	CDSs: 0
+	  hypotheticals: 0
+	  signal peptides: 0
+	sORFs: 0
+	gaps: 0
+	oriCs/oriVs: 0
+	oriTs: 0
+
+export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/14/working
+	human readable TSV...
+	GFF3...
+	INSDC GenBank & EMBL...
+	genome sequences...
+	feature nucleotide sequences...
+	translated CDS sequences...
+	machine readable JSON...
+	genome and annotation summary...
+
+If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
+Annotation successfully finished in 0:00 [mm:ss].
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/TEST_5/TEST_5.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/TEST_5/TEST_5.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,29 @@
+Sequence(s):
+Length: 1330
+Count: 1
+GC: 45.2
+N50: 1330
+N ratio: 0.0
+coding density: 0.0
+
+Annotation:
+tRNAs: 0
+tmRNAs: 0
+rRNAs: 0
+ncRNAs: 0
+ncRNA regions: 0
+CRISPR arrays: 0
+CDSs: 0
+hypotheticals: 0
+signal peptides: 0
+sORFs: 0
+gaps: 0
+oriCs: 0
+oriVs: 0
+oriTs: 0
+
+Bakta:
+Software: v1.4.2
+Database: v3.0
+DOI: 10.1099/mgen.0.000685
+URL: github.com/oschwengers/bakta
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/prodigal.tf
Binary file test-data/tmp/prodigal.tf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/replicons.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/replicons.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,3 @@
+NC_002695.2	c1	c	c	-
+NC_002128.1	p1	plasmid	c	pO157
+NC_002127.1	p2	p	c	pOSAK1
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3f
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3i
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3m
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3p
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR.LIB.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-mutation.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-mutation.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	accession_version	mutation_position	mutation_symbol	class	subclass	mutated_protein_name
+Escherichia	WP_000019358.1	12	soxS_A12S	MULTIDRUG	AMPICILLIN/CHLORAMPHENICOL/QUINOLONE/RIFAMPIN/TETRACYCLINE	Escherichia_ampicillin/chloramphenicol/quinolone/rifampin/tetracycline_resistant_SoxS
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-suppress
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-suppress	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	protein_accession	protein_gi
+Escherichia	AAA21095.1	151858
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-susceptible.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt-susceptible.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	gene_symbol	accession_version	resistance_cutoff	class	subclass	resistance_protein_name
+Streptococcus_pneumoniae	pbp1a	WP_001040013.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pdb
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pdb has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.phr
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.phr has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pin
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pin has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.psq
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.psq has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.ptf
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.ptf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pto
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMRProt.pto has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ndb
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ndb has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nhr
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nhr has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nin
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nin has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.not
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.not has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nsq
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nsq has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ntf
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.ntf has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nto
Binary file test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/AMR_CDS.nto has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/database_format_version.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/database_format_version.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+3.10.16
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/fam.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/fam.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1744 @@
+#node_id	parent_node_id	gene_symbol	hmm_id	hmm_tc1	hmm_tc2	blastrule_complete_ident	blastrule_complete_wp_coverage	blastrule_complete_br_coverage	blastrule_partial_ident	blastrule_partial_wp_coverage	blastrule_partial_br_coverage	reportable	type	subtype	class	subclass	family_name
+ACID	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	ACID			
+ALL		-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0					
+AME	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			aminoglycoside modifying enzymes
+AMR	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			
+BIOCIDE	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	BIOCIDE			
+BcII	bla-B1	bla2	NF033095.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BcII family subclass B1 metallo-beta-lactamase
+CDF_efflux	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CDF family cation efflux transporter
+CMY2-MIR-ACT-EC	bla-C	ampC	NF012173.1	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CMY2/MIR/ACT/EC family class C beta-lactamase
+EFFLUX	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			efflux
+HARLDQ_not_B3	bla-B3	-	NF000405.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			HARLDQ motif MBL-fold protein
+HEAT	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	HEAT			
+HTH_5	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			ArsR/SmtB family metalloregulatory transcriptional repressor
+LHR_hdeD	HEAT	hdeD-GI	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	STRESS	HEAT			heat resistance membrane protein HdeD-GI
+LHR_hsp20A	HEAT	hsp20	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	HEAT			small heat shock protein sHSP20
+LHR_hsp20B	HEAT	shsP	-	0.00	0.00	93.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	HEAT			small heat shock protein sHSP20-GI
+LHR_kefB	HEAT	kefB-GI	-	0.00	0.00	86.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance system K+/H+ antiporter KefB-GI
+LHR_psiE	HEAT	psi-GI	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein PsiE-GI
+LHR_trx	HEAT	trxLHR	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance system thioredoxin Trx-GI
+LHR_yfdX1	HEAT	yfdX1	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein YfdX1
+LHR_yfdX2	HEAT	yfdX2	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	HEAT			heat resistance protein YfdX2
+MATE_efflux	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux MATE transporter
+METAL-RND-IM	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			cation efflux RND transporter permease subunit
+METAL	STRESS	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			Metal Resistance
+MFS_efflux_CHL	MFS_efflux	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter
+MFS_efflux_qac	BIOCIDE	qac	NF000089.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacA/B family quaternary ammonium compound efflux MFS transporter
+MFS_efflux	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux MFS transporter
+MerP_Gneg	merP	merP	TIGR02052.1	92.55	92.55	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system periplasmic binding protein MerP
+OM_sidero	VIRULENCE_Ecoli	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			TonB-dependent siderophore receptor
+P-type_ATPase	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			metal-translocating P-type ATPase
+PERI-SENSOR	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			periplasmic heavy metal sensor
+RESPONSE_REG	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			DNA-binding response regulator
+RND-IM	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux RND transporter permease subunit
+RND-OM	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux transporter outer membrane subunit
+RND-peri	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			multidrug efflux RND transporter periplasmic adaptor subunit
+SMR_efflux_bcrB	SMR_efflux	bcrB	NF033469.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	quaternary ammonium compound efflux SMR transporter BcrB
+SMR_efflux_bcrC	SMR_efflux	bcrC	NF033470.1	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	quaternary ammonium compound efflux SMR transporter BcrC
+SMR_efflux_emrE	SMR_efflux	emrE	NF000336.1	195.00	195.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux SMR transporter EmrE
+SMR_efflux_smr	SMR_efflux	smr	NF000280.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	multidrug efflux SMR transporter Smr
+SMR_efflux	BIOCIDE	qac	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	SMR family small multidrug resistance efflux protein
+SMR_qac_int	SMR_efflux	qac	NF033137.0	188.00	188.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	Qac family quaternary ammonium compound efflux SMR transporter
+SMR_qac_pB8	SMR_efflux	qac	NF000148.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	Qac-pB8 family quaternary ammonium compound efflux SMR transporter
+STRESS	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	STRESS			
+VIRULENCE_Cdiff	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Cperf	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Ecoli	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE_Saur	VIRULENCE	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+VIRULENCE	ALL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			
+aac(2')-IIa	aac(2')	aac(2')-IIa	NF000100.2	510.00	510.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	kasugamycin N-acetyltransferase AAC(2')-IIa
+aac(2')-IIb	aac(2')	aac(2')-IIb	NF033472.1	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	kasugamycin N-acetyltransferase AAC(2')-IIb
+aac(2')-Ia	aac(2')	aac(2')-Ia	NF000108.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ia
+aac(2')-Ib	aac(2')	aac(2')-Ib	NF000010.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ib
+aac(2')-Ic	aac(2')	aac(2')-Ic	NF000034.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ic
+aac(2')-Id	aac(2')	aac(2')-Id	NF000042.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Id
+aac(2')-Ie	aac(2')	aac(2')-Ie	NF000054.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMCYIN	aminoglycoside N-acetyltransferase AAC(2')-Ie
+aac(2')	aac	aac(2')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 2'-N-acetyltransferase
+aac(3)-IIIa	aac(3)	aac(3)-IIIa	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	40.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIa
+aac(3)-IIIb	aac(3)	aac(3)-IIIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIb
+aac(3)-IIIc	aac(3)	aac(3)-IIIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIIc
+aac(3)-IIa	aac(3)-II	aac(3)-IIa	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIa
+aac(3)-IIb	aac(3)-II	aac(3)-IIb	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIb
+aac(3)-IIc	aac(3)-II	aac(3)-IIc	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIc
+aac(3)-IId	aac(3)-II	aac(3)-IId	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IId
+aac(3)-IIe	aac(3)-II	aac(3)-IIe	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIe
+aac(3)-IIg	aac(3)-II	aac(3)-IIg	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-IIg
+aac(3)-II	aac(3)	aac(3)-II	NF033080.0	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-II family aminoglycoside N-acetyltransferase
+aac(3)-IVa	aac(3)_IV_fam	aac(3)-IVa	-	0.00	0.00	98.00	90.00	97.00	99.00	95.00	45.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(3)-IVa
+aac(3)-IVb	aac(3)_IV_fam	aac(3)-IVb	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(3)-IVb
+aac(3)-IXa	aac(3)	aac(3)-IXa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-IXa
+aac(3)-Ia	aac(3)-I	aac(3)-Ia	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ia
+aac(3)-Ib	aac(3)-I	aac(3)-Ib	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ib
+aac(3)-Ic	aac(3)-I	aac(3)-Ic	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ic
+aac(3)-Id	aac(3)-I	aac(3)-Id	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Id
+aac(3)-If	aac(3)-I	aac(3)-If	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-If
+aac(3)-Ig	aac(3)-I	aac(3)-Ig	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ig
+aac(3)-Ih	aac(3)-I	aac(3)-Ih	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	1	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ih
+aac(3)-Ii	aac(3)-I	aac(3)-Ii	-	0.00	0.00	98.00	97.00	97.00	99.00	97.00	50.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-Ii
+aac(3)-I	aac(3)_gen	aac(3)-I	NF033083.0	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-I family aminoglycoside 3-N-acetyltransferase
+aac(3)-VIII	aac(3)	aac(3)-VIII	NF033180.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-VIII
+aac(3)-VIIa	aac(3)	aac(3)-VIIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-VIIa
+aac(3)-VIa	aac(3)	aac(3)-VIa	NF033612.0	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(3)-VIa
+aac(3)-XI	aac(3)_gen	aac(3)-XI	NF000482.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-XI
+aac(3)-Xa	aac(3)	aac(3)-Xa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(3)-Xa
+aac(3)_IV_fam	aac(3)_gen	aac(3)-IV	NF033081.0	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(3)-IV family aminoglycoside N-acetyltransferase
+aac(3)_gen	aac	aac(3)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside 3-N-acetyltransferase
+aac(3)	aac(3)_gen	aac(3)	NF033082.0	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside 3-N-acetyltransferase
+aac(6')-29	aac(6')	aac(6')-29	NF000050.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-29
+aac(6')-30	aac(6')	aac(6')-30	NF033077.0	255.00	255.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-30
+aac(6')-31	aac(6')-set_A	aac(6')-31	NF000118.3	385.00	385.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-31
+aac(6')-35	aac(6')	aac(6')-35	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-35
+aac(6')-III	aac(6')	aac(6')-III	NF038102.1	305.00	305.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	tobramycin N-acetyltransferase AAC(6')-III
+aac(6')-IIa	aac(6')-II	aac(6')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-IIa
+aac(6')-IIc	aac(6')-II	aac(6')-IIc	NF000135.2	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-IIc
+aac(6')-IId	aac(6')-Ib-G	aac(6')-IId	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-IId
+aac(6')-II	aac(6')-set_A	aac(6')-II	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-II family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Iad	aac(6')-I	aac(6')-Iad	NF000115.2	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Iad
+aac(6')-Iag	aac(6')	aacA48	NF033130.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-Iag
+aac(6')-Iak	aac(6')_Steno	aac(6')-Iak	NF000497.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Iak
+aac(6')-Ian	aac(6')-I	aac(6')-Ian	NF000431.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aac(6')-Ia	aac(6')_Ia_fam	aac(6')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-Ia
+aac(6')-Ib''	aac(6')-Ib-KT	aac(6')-Ib''	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ib''
+aac(6')-Ib'	aac(6')-Ib-G	aac(6')-Ib'	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	aminoglycoside N-acetyltransferase AAC(6')-Ib'
+aac(6')-Ib-AGKT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-AKT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-D181Y	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-G	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-KT	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-K	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-W104R	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib-cr	aac(6')-Ib	aac(6')-Ib-cr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr
+aac(6')-Ib-generic	aac(6')-Ib	aac(6')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Ib11	aac(6')-Ib-AGKT	aac(6')-Ib11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ib11
+aac(6')-Ib	aac(6')-set_A	aac(6')-Ib	NF033074.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
+aac(6')-Id	aac(6')-I	aac(6')-Id	NF033374.6	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Id
+aac(6')-Ie2	aac(6')-Ie_fam	aac(6')-Ie	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ie
+aac(6')-Ie_fam	aac(6')-I	aac(6')-Ie	NF033693.0	340.00	340.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ie family aminoglycoside N-acetyltransferase
+aac(6')-Ie	aac(6')-Ie_fam	aac(6')-Ie	NF000507.1	450.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ie
+aac(6')-If	aac(6')-I	aac(6')-If	NF000110.2	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-If
+aac(6')-Il	aac(6')-I	aac(6')-Il	NF000158.2	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Il
+aac(6')-Im	aac(6')-I	aac(6')-Im	NF000016.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Im
+aac(6')-Ip	aac(6')_Ia_fam	aac(6')-Ip	NF000486.1	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AAC(6')-Ip
+aac(6')-Iq	aac(6')_Ia_fam	aac(6')-Iq	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside 6'-N-acetyltransferase AAC(6')-Iq
+aac(6')-Iz	aac(6')_Steno	aac(6')-Iz	NF000138.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Iz
+aac(6')-I	aac(6')	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-I family aminoglycoside 6'-N-acetyltransferase
+aac(6')-set_A	aac(6')	aac(6')	NF012165.0	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')-sk	aac(6')_Strep	aac(6')-kana	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Acine	aac(6')-I	aac(6')-I	NF000224.3	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aac(6')_Entco	aac(6')	aac(6')-I	NF000165.3	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Ia_fam	aac(6')	aac(6')	NF033078.2	265.00	265.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase
+aac(6')_Serra	aac(6')	aac(6')	NF000021.4	310.00	310.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Steno	aac(6')	aac(6')	NF033075.0	290.00	290.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Strep	aac(6')	aac(6')	NF000225.3	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')_Yersi	aac(6')	aac(6')	NF033076.0	290.00	290.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aac(6')	aac	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside 6'-N-acetyltransferase
+aacA-ACI1	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI2	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI3	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI4	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI5	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI6	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ACI7	aac(6')_Acine	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-Ighjkrstuvwx family aminoglycoside N-acetyltransferase
+aacA-ENT1	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT2	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT3	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-ENT4	aac(6')_Entco	aac(6')-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-10	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-13	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-15	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA-STR-7	aac(6')_Strep	aac(6')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA10	aac(6')-I	aacA10	NF033151.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	AAC(6')-I family aminoglycoside 6'-N-acetyltransferase
+aacA32	aac(6')-set_A	aacA32	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase
+aacA34	aac(6')	aacA34	NF000123.2	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA34
+aacA37	aac(6')	aacA37	NF000152.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA37
+aacA38	aac(6')-set_A	aacA38	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA38
+aacA40	aac(6')-II	aacA40	NF000048.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA40
+aacA43	aac(6')_Ia_fam	aacA43	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase AacA43
+aacA49	aac(6')_Ia_fam	aacA49	NF033150.1	410.00	410.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase AacA49
+aacA57-2	aacA57	aacA57-2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aacA57	aac(6')-Ian	aacA57	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside N-acetyltransferase AAC(6')-Ian
+aacA8	aac(6')-set_A	aacA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside 6'-N-acetyltransferase AacA8
+aac	AME	aac	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside N-acetyltransferase
+aad9	ant(9)	aad9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase
+aadA10	ant(3'')-Ia	aadA10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA10
+aadA11	ant(3'')-Ia	aadA11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA11
+aadA12	ant(3'')-Ia	aadA12	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA12
+aadA13	ant(3'')-Ia	aadA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA13
+aadA15	ant(3'')-Ia	aadA15	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA15
+aadA16	ant(3'')-Ia	aadA16	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16
+aadA1bt	aadA1	aadA1bt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1bt
+aadA1	ant(3'')-Ia	aadA1	NF033126.1	587.00	587.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1
+aadA21	ant(3'')-Ia	aadA21	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA21
+aadA22	ant(3'')-Ia	aadA22	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22
+aadA25	ant(3'')-Ia	aadA25	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA25
+aadA27	ant(3'')-II	aadA27	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-II family aminoglycoside nucleotidyltransferase AadA27
+aadA2	ant(3'')-Ia	aadA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2
+aadA31	ant(3'')-Ia	aadA31	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA31
+aadA3	ant(3'')-Ia	aadA3	NF033127.1	595.50	595.50	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA3
+aadA4	aadA_4_5	aadA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA4
+aadA5	aadA_4_5	aadA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5
+aadA6	ant(3'')-Ia	aadA6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA6
+aadA7	ant(3'')-Ia	aadA7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA7
+aadA8	ant(3'')-Ia	aadA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA8
+aadA9	ant(3'')-Ia	aadA9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA9
+aadA_4_5	ant(3'')-Ia	aadA_4_5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA
+aadE-Cc	ant(6)	aadE-Cc	NF033221.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadE-Cc
+aadE	ant(6)	aadE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadE
+aadK	ant(6)	aadK	NF000312.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadK
+aadS_fam	ant6_gen	aadS	NF033387.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	AadS family aminoglycoside 6-adenylyltransferase
+aadS	aadS_fam	aadS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase AadS
+aafA	VIRULENCE_Ecoli	aafA	-	0.00	0.00	76.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II major subunit AafA
+aafB	VIRULENCE_Ecoli	aafB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II minor subunit AafB
+aafC	VIRULENCE_Ecoli	aafC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II usher protein AafC
+aafD	VIRULENCE_Ecoli	aafD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria II chaperone AafD
+aaiC	VIRULENCE_Ecoli	aaiC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type VI secretion system protein AaiC/Hcp2
+aap	VIRULENCE_Ecoli	aap	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			dispersin Aap
+aar	VIRULENCE_Ecoli	aar	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AggR-activated transcriptional regulator Aar
+aatA	VIRULENCE_Ecoli	aatA	-	0.00	0.00	86.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			dispersin export ABC transporter outer membrane protein AatA
+abaF	MFS_efflux	abaF	-	0.00	0.00	71.00	90.00	90.00	96.00	84.00	25.00	1	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin efflux MFS transporter AbaF
+abc-f	AMR	abc-f	NF000355.3	450.00	440.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein
+abcf-produ	abc-f	abc-f	NF000171.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection protein
+acr3_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	Acr3 family arsenite efflux transporter
+acr3	acr3_gen	acr3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter Acr3
+acrF	RND-IM	acrF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit AcrF
+adeC-K-oprM	RND-OM	adeC	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor
+adeC	adeC-K-oprM	adeC	NF033142.1	975.00	975.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter AdeABC outer membrane channel subunit AdeC
+adeD	RND-peri	adeD	-	0.00	0.00	86.00	90.00	90.00	96.00	88.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit AdeD
+adeE	RND-IM	adeE	-	0.00	0.00	85.00	90.00	90.00	88.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit AdeE
+afaC	VIRULENCE_Ecoli	afaC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AfaC-I/III family usher protein
+agg3A	VIRULENCE_Ecoli	agg3A	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 major subunit Agg3A
+agg3B	VIRULENCE_Ecoli	agg3B	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 minor subunit Agg3B
+agg3C	VIRULENCE_Ecoli	agg3C	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 usher protein Agg3C
+agg3D	VIRULENCE_Ecoli	agg3D	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 3 chaperone Agg3D
+agg4A	VIRULENCE_Ecoli	agg4A	-	0.00	0.00	80.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 4 major subunit Agg4A/HdaA
+agg4D	VIRULENCE_Ecoli	agg4D	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria 4 chaperone Agg4D/HdaD
+agg5A	VIRULENCE_Ecoli	agg5A	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria V major subunit Agg5A
+aggA	VIRULENCE_Ecoli	aggA	-	0.00	0.00	60.00	80.00	90.00	70.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I major subunit AggA
+aggB	VIRULENCE_Ecoli	aggB	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I minor subunit AggB
+aggC	VIRULENCE_Ecoli	aggC	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I usher protein AggC
+aggD	VIRULENCE_Ecoli	aggD	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence fimbria I chaperone AggD
+aggR	VIRULENCE_Ecoli	aggR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aggregative adherence transcriptional regulator AggR
+air	VIRULENCE_Ecoli	air	-	0.00	0.00	85.00	80.00	80.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			inverse autotransporter adhesin EaeX/Air
+almG	AMR	almG	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	COLISTIN	COLISTIN	glycine--lipid A transferase AlmG
+alpha-1	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha-2	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha-5	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	NU	intimin type nu
+alpha-6	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ZETA	intimin type zeta
+alpha-8	alpha	eae	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+alpha	eae_typing_E._coli	eae	NF033639.1	2050.00	2050.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	ALPHA	intimin type alpha
+amvA	MFS_efflux	amvA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter AmvA
+ant(2'')-Ia	ant(2'')	ant(2'')-Ia	NF000064.3	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(2'')-Ia
+ant(2'')	ant	ant(2'')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	ANT(2'') family aminoglycoside adenylyltransferase
+ant(3'')-IIa	ant(3'')-II	ant(3'')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIa
+ant(3'')-IIb	ant(3'')-II	ant(3'')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIb
+ant(3'')-IIc	ant(3'')-II	ant(3'')-IIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-IIc
+ant(3'')-II	ant	ant(3'')-II	NF033220.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-II family aminoglycoside nucleotidyltransferase
+ant(3'')-Ia	ant(3'')-I	ant(3'')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA
+ant(3'')-Ib	ant	ant(3'')-Ib	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ib
+ant(3'')-Ih	ant(3'')-I	ant(3'')-Ih	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ih
+ant(3'')-Ij	ant(3'')-I	ant(3'')-Ij	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(3'')-Ij
+ant(3'')-I	ant	ant(3'')	NF012157.0	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	ANT(3'')-I family aminoglycoside nucleotidyltransferase
+ant(4')-IIa	ant(4')-II	ant(4')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(4')-IIa
+ant(4')-IIb	ant(4')-II	ant(4')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside nucleotidyltransferase ANT(4')-IIb
+ant(4')-II	ant(4')	ant(4')	NF028535.0	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4')-II family aminoglycoside nucleotidyltransferase
+ant(4')-Ia	ant(4')-I	aadD1	NF000181.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
+ant(4')-Ib	ant(4')-I	aadD2	NF000079.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ib
+ant(4')-Ic	ant(4')-I	ant(4')-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	aminoglycoside O-nucleotidyltransferase ANT(4')-Ic
+ant(4')-I	ant(4')	ant(4')-I	NF033061.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4')-I family aminoglycoside nucleotidyltransferase
+ant(4')	ant	ant(4')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	ANT(4') family aminoglycoside nucleotidyltransferase
+ant(6)-Ia	ant(6)	ant(6)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ia
+ant(6)-Ib	ant(6)	ant(6)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ib
+ant(6)-Ic	ant(6)	ant(6)-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside nucleotidyltransferase ANT(6)-Ic
+ant(6)	ant6_gen	ant(6)	NF033084.2	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-nucleotidyltransferase
+ant(9)-Ia	ant(9)	ant(9)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside nucleotidyltransferase ANT(9)-Ia
+ant(9)-Ib	ant(9)	ant(9)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside nucleotidyltransferase ANT(9)-Ib
+ant(9)	ant	ant(9)	NF012212.0	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	ANT(9) family aminoglycoside nucleotidyltransferase
+ant6_gen	ant	ant(6)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside 6-adenylyltransferase
+ant	AME	ant	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside nucleotidyltransferase
+aph(2'')-IIIa	aph(2'')	aph(2'')-IIIa	NF000044.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IIIa
+aph(2'')-IIa	aph(2'')	aph(2'')-IIa	NF000015.3	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IIa
+aph(2'')-IVa	aph-Ie-IVa	aph(2'')-IVa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-IVa
+aph(2'')-I_a_f_h	aph(2'')	aph(2'')-I	NF033692.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-Ia/If/Ih family aminoglycoside O-phosphotransferase
+aph(2'')-Ia	aph(2'')-I_a_f_h	aph(2'')-Ia	NF000508.1	600.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ia
+aph(2'')-Ie	aph-Ie-IVa	aph(2'')-Ie	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ie
+aph(2'')-If2	aph(2'')-I_a_f_h	aph(2'')-If2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-If2
+aph(2'')-If_h	aph(2'')-I_a_f_h	aph(2'')-I	NF000498.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-If/Ih family aminoglycoside O-phosphotransferase
+aph(2'')-If	aph(2'')-If_h	aph(2'')-If	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-If
+aph(2'')-Ig	aph(2'')	aph(2'')-Ig	NF000132.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ig
+aph(2'')-Ih	aph(2'')-If_h	aph(2'')-Ih	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	aminoglycoside O-phosphotransferase APH(2'')-Ih
+aph(2'')	aph	aph(2'')	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'') family aminoglycoside O-phosphotransferase
+aph(3'')-Ia	aph(3'')	aph(3'')-Ia	NF032894.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ia
+aph(3'')-Ib	aph(3'')	aph(3'')-Ib	NF032895.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ib
+aph(3'')-Ic	aph(3'')	aph(3'')-Ic	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(3'')-Ic
+aph(3'')	aph	aph(3'')	NF032896.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(3'') family aminoglycoside O-phosphotransferase
+aph(3')-II-therm	aph(3')-II	aph(3')-II	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3')-II family aminoglycoside O-phosphotransferase
+aph(3')-IIIa	aph(3')	aph(3')-IIIa	NF033064.0	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIIa
+aph(3')-IIa	aph(3')-II	aph(3')-IIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIa
+aph(3')-IIb	aph(3')-II	aph(3')-IIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIb
+aph(3')-IIc	aph(3')-II	aph(3')-IIc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IIc
+aph(3')-IId	aph(3')-II	aph(3')-IId	-	0.00	0.00	88.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IId
+aph(3')-II	aph(3')	aph(3')-II	NF032898.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3')-II family aminoglycoside O-phosphotransferase
+aph(3')-IVa	aph(3')	aph(3')-IVa	NF033065.0	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-IVa
+aph(3')-IX	aph(3')	aph(3')-IX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	APH(3') family aminoglycoside O-phosphotransferase
+aph(3')-Ia	aph(3')-I	aph(3')-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Ia
+aph(3')-Ib	aph(3')-I	aph(3')-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Ib
+aph(3')-Id	aph(3')-I	aph(3')-Id	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-Id
+aph(3')-I	aph(3')	aph(3')-I	NF033059.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN	APH(3')-I family aminoglycoside O-phosphotransferase
+aph(3')-VIIIa	aph(3')-VIII	aph(3')-VIIIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIIa
+aph(3')-VIIIb	aph(3')-VIII	aph(3')-VIIIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIIb
+aph(3')-VIII	aph(3')	aph(3')-VIII	NF033066.0	520.00	520.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIII
+aph(3')-VIIa	aph(3')	aph(3')-VIIa	NF033067.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIIa
+aph(3')-VIa	aph(3')-VI	aph(3')-VIa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIa
+aph(3')-VIb	aph(3')-VI	aph(3')-VIb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-VIb
+aph(3')-VI	aph(3')	aph(3')-VI	NF033062.0	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	APH(3')-VI family aminoglycoside O-phosphotransferase
+aph(3')-Va	aph(3')-V	aph(3')-Va	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Va
+aph(3')-Vb	aph(3')-V	aph(3')-Vb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Vb
+aph(3')-Vc	aph(3')-V	aph(3')-Vc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase APH(3')-Vc
+aph(3')-V	aph(3')	aph(3')-V	NF032897.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(3')-V family aminoglycoside O-phosphotransferase
+aph(3')-XV	aph(3')	aph(3')-XV	NF033063.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	aminoglycoside O-phosphotransferase APH(3')-XV
+aph(3')	aph	aph(3')	NF033068.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(3') family aminoglycoside O-phosphotransferase
+aph(4)-Ia	aph(4)-I	aph(4)-Ia	NF000107.2	725.00	725.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	aminoglycoside O-phosphotransferase APH(4)-Ia
+aph(4)-I	aph	aph(4)-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	APH(4)-I family aminoglycoside O-phosphotransferase
+aph(6)-Ia	aph(6)-I	aph(6)-Ia	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ia
+aph(6)-Ib	aph(6)-I	aph(6)-Ib	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ib
+aph(6)-Ic_gen	aph(6)-I	aph(6)-I	NF033614.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(6)-I family aminoglycoside O-phosphotransferase
+aph(6)-Ic	aph(6)-Ic_gen	aph(6)-Ic	NF000011.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Ic
+aph(6)-Id	aph(6)-I	aph(6)-Id	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	aminoglycoside O-phosphotransferase APH(6)-Id
+aph(6)-I	aph	aph(6)-I	NF012171.0	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	APH(6)-I family aminoglycoside O-phosphotransferase
+aph(6)-Smalt	aph(6)-I	aph(6)	NF012160.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	APH(6) family putative aminoglycoside O-phosphotransferase
+aph(7'')-Ia	aph	aph(7'')-Ia	NF000137.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	aminoglycoside O-phosphotransferase APH(7'')-Ia
+aph(9)-Ia	aph(9)-I	aph(9)-Ia	NF000052.4	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside O-phosphotransferase APH(9)-Ia
+aph(9)-Ib	aph(9)-I	aph(9)-Ib	NF000029.2	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	aminoglycoside O-phosphotransferase APH(9)-Ib
+aph(9)-I	aph	aph(9)-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	APH(9)-I family aminoglycoside O-phosphotransferase
+aph-Ie-IVa	aph(2'')	aph(2'')	NF000076.3	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	APH(2'')-Ie/IVa family aminoglycoside O-phosphotransferase
+aphA16	aph(3')	aphA16	NF033112.0	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	APH(3') family aminoglycoside O-phosphotransferase AphA16
+aph	AME	aph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	aminoglycoside O-phosphotransferase
+apmA	AMR	apmA	NF000084.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN	aminocyclitol acetyltransferase ApmA
+ariR	ACID	ymgB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	ACID			biofilm/acid-resistance regulator AriR
+armA	rmt	armA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+arr-2b	arr	arr	NF000066.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase
+arr-3	arr	arr-3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-3
+arr-6	arr	arr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-6
+arr-Msmeg	arr	arr	NF000318.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase Arr-2b
+arr	AMR	arr	NF033144.1	130.00	130.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	NAD(+)--rifampin ADP-ribosyltransferase
+arsA	METAL	arsA	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter ATPase subunit ArsA
+arsB_Lm	acr3_gen	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_R773	arsB	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pI258	arsB	arsB	NF033877.0	760.00	760.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pKW301	arsB	arsB	-	0.00	0.00	96.00	90.00	90.00	98.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB_pYV	arsB	arsB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsB	METAL	arsB	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter membrane subunit ArsB
+arsC_gluta	METAL	arsC	NF007456.1	242.00	242.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENATE	glutaredoxin-dependent arsenate reductase
+arsC_thio	METAL	arsC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENATE	thioredoxin-dependent arsenate reductase
+arsD_like	METAL	arsD2	-	0.00	0.00	70.00	90.00	90.00	80.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter metallochaperone ArsD-related protein
+arsD	METAL	arsD	NF033727.1	95.00	95.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENITE	arsenite efflux transporter metallochaperone ArsD
+arsH	METAL	arsH	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsenic resistance NADPH-dependent reductase ArsH
+arsN1a	arsN_gen	arsN1	NF040503.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsinothricin resistance N-acetyltransferase ArsN1 family A
+arsN1b	arsN_gen	arsN1	NF040504.1	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsinothricin resistance N-acetyltransferase ArsN1 family B
+arsN2	arsN_gen	arsN2	NF040501.1	125.00	125.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	arsenic resistance N-acetyltransferase ArsN2
+arsN_gen	METAL	arsN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	ARSENIC	ARSENIC	ArsN family N-acetyltransferase
+arsP	METAL	arsP	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ORGANOARSENIC	organoarsenical efflux permease ArsP
+arsR_K-12	arsR	arsR	-	0.00	0.00	87.00	90.00	90.00	95.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_LGI2_1	arsR	arsR	-	0.00	0.00	87.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_LGI2_2	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_R46	arsR	arsR	-	0.00	0.00	88.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_Tn7102	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pI258	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pKW301	arsR_R46	arsR	-	0.00	0.00	88.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pSX267	arsR	arsR	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR_pYV	arsR	arsR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	ARSENIC	ARSENIC	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+arsR	HTH_5	arsR	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL	ARSENIC	ARSENITE	As(III)-sensing metalloregulatory transcriptional repressor ArsR
+asr	ACID	asr	NF033636.1	50.00	40.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	ACID			acid resistance repetitive basic protein Asr
+astA	VIRULENCE_Ecoli	astA	NF033646.1	80.00	80.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin EAST1
+aur	VIRULENCE_Saur	aur	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			zinc metalloproteinase aureolysin
+auto_tox	VIRULENCE_Ecoli	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			SPATE family serine protease autotransporter
+bcrA_Lm	AMR	bcrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BACITRACIN	BACITRACIN	bacitracin resistance ABC transporter ATP-binding subunit BcrA
+becA	VIRULENCE_Cperf	becA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin enzymatic subunit BecA
+becB	VIRULENCE_Cperf	becB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin binding subunit BecB
+bepC	RND-OM	bepC	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane subunit BepC
+bepD	RND-peri	bepD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit BepD
+bepE	RND-IM	bepE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit BepE
+bepF	RND-peri	bepF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit BepF
+bepG	RND-IM	bepG	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit BepG
+beta-1	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+beta-2	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+beta-4	beta	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	KAPPA	intimin type kappa
+beta	eae_typing_E._coli	eae	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	60.00	1	VIRULENCE	VIRULENCE	INTIMIN	BETA	intimin type beta
+bexA	MATE_efflux	bexA	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MATE transporter BexA
+bfpA	pilus	bfpA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bundle-forming pilus major subunit BfpA
+bin_CdtA	VIRULENCE_Cdiff	cdtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin enzymatic subunit CdtA
+bin_CdtB	VIRULENCE_Cdiff	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin binding subunit CdtB
+bind_CopB	multi_Cu_ox	copB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	copper-binding protein CopB
+bla-A2	bla-A	bla	NF012099.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase, subclass A2
+bla-A_Chryseo	bla-A2	bla-A	NF000447.2	510.00	510.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CGA/CIA family class A beta-lactamase
+bla-A_carba	bla-A	bla	NF000538.0	410.00	410.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	carbapenem-hydrolyzing class A beta-lactamase
+bla-A_firm	bla-A	bla	NF012167.0	427.00	427.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+bla-A	bla	bla	NF033103.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+bla-B1-FLAV	blaB-IND-MUS	bla-B1-FLAV	NF000450.2	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B1 metallo-beta-lactamase
+bla-B1	bla-B	bla	NF033088.2	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B1 metallo-beta-lactamase
+bla-B2	bla-B	bla	NF033087.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B2 metallo-beta-lactamase
+bla-B3-CAR	bla-B	blaCAR	NF000469.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAR family subclass B3 metallo-beta-lactamase
+bla-B3	bla-B	bla	NF033105.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	subclass B3 metallo-beta-lactamase
+bla-B	bla	bla	NF012229.1	100.00	100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	metallo-beta-lactamase
+bla-C	bla	ampC	NF033085.1	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class C beta-lactamase
+bla-D-Gpos	blaOXA	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BPU/BAT/BSU family class D beta-lactamase
+bla-D	bla	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+bla1	bla-A_firm	bla	NF033096.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase Bla1
+bla2a	bla-A	bla2a	NF033099.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	Exo family class A beta-lactamase
+blaAAK	blaSHV-LEN	blaAAK	NF038195.1	655.00	655.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AAK family class A beta-lactamase
+blaACC	bla-C	blaACC	NF000397.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACC family cephalosporin-hydrolyzing class C beta-lactamase
+blaACI	bla-A	blaACI	NF000448.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACI family class A beta-lactamase
+blaACT	CMY2-MIR-ACT-EC	blaACT	NF000385.4	810.00	810.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ACT family cephalosporin-hydrolyzing class C beta-lactamase
+blaADC-8_fam	bla-C	blaADC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ADC-like cephalosporin-hydrolyzing class C beta-lactamase
+blaADC	bla-C	blaADC	NF000425.2	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ADC family extended-spectrum class C beta-lactamase
+blaAER	bla-A	blaAER	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AER family class A beta-lactamase
+blaAFM	bla-B1	blaAFM	NF033736.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AFM family subclass B1 metallo-beta-lactamase
+blaAIM	bla-B3	blaAIM	NF000439.2	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AIM family subclass B3 metallo-beta-lactamase
+blaALG11	bla-B3	blaALG11	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALG11 family subclass B3 metallo-beta-lactamase
+blaALG6	bla-B3	blaALG6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALG6 family subclass B3 metallo-beta-lactamase
+blaALI	bla-B1	blaALI	NF033582.2	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALI family subclass B1 metallo-beta-lactamase
+blaANA	bla-B1	blaANA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ANA family subclass B1 metallo-beta-lactamase
+blaAQU	blaCMY-FOX	blaAQU	NF033467.0	815.00	815.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AQU family class C beta-lactamase
+blaARL	bla-A	blaARL	NF033386.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ARL family class A beta-lactamase
+blaAST	bla-A	blaAST	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	AST family class A beta-lactamase
+blaASU1	bla-A	blaASU1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ASU1 family class A beta-lactamase
+blaAXC	bla-A	blaAXC	NF033929.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	AXC family carbapenem-hydrolyzing class A beta-lactamase
+blaA_Mtub	bla-A	blaA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaA
+blaA_Yent	bla-A	blaA	NF033152.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaA
+blaB-IND-MUS	bla-B1	bla	NF012146.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaB/IND/MUS family subclass B1 metallo-beta-lactamase
+blaB3SU1	bla-B3	blaB3SU1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	B3SU1 family subclass B3 metallo-beta-lactamase
+blaB3SU2	bla-B3	blaB3SU2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	B3SU2 family subclass B3 metallo-beta-lactamase
+blaBAT	bla-D-Gpos	blaBAT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BAT family class D beta-lactamase
+blaBBI	bla-A_firm	blaBBI	NF033714.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BBI family class A beta-lactamase
+blaBCL	bla-A_firm	blaBCL	NF033060.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BCL family class A beta-lactamase
+blaBEL	bla-A	blaBEL	NF000398.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BEL family class A extended-spectrum beta-lactamase
+blaBES	bla-A	blaBES	NF000451.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BES family class A beta-lactamase
+blaBIC	bla-A_carba	blaBIC	NF000449.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BIC family carbapenem-hydrolyzing class A beta-lactamase
+blaBJP	bla-B3	blaBJP	NF012140.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BJP family subclass B3 metallo-beta-lactamase
+blaBKC_GPC	bla-A	bla	NF033626.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BKC/GPC family carbapenem-hydrolyzing class A beta-lactamase
+blaBKC	blaBKC_GPC	blaBKC	NF000413.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BKC family carbapenem-hydrolyzing class A beta-lactamase
+blaBPU	bla-D-Gpos	blaBPU	NF012098.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BPU family class D beta-lactamase
+blaBRO	bla-A	blaBRO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BRO family class A beta-lactamase
+blaBSU	bla-D-Gpos	blaBSU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BSU family class D beta-lactamase
+blaBUT	CMY2-MIR-ACT-EC	blaBUT	NF038238.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BUT family class C beta-lactamase
+blaB	blaB-IND-MUS	blaB	NF033107.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	BlaB family subclass B1 metallo-beta-lactamase
+blaCAM	blaB-IND-MUS	blaCAM	NF033895.1	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAM family subclass B1 metallo-beta-lactamase
+blaCARB_gen	bla-A	blaCARB	NF000481.1	430.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CARB/PSE/RTG family carbenicillin-hydrolyzing class A beta-lactamase
+blaCARB	blaCARB_gen	blaCARB	NF000188.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CARB family carbenicillin-hydrolyzing class A beta-lactamase
+blaCAU/MBL1b	bla-B3	blaCAU	NF000427.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CAU/MBL1b family subclass B3 metallo-beta-lactamase
+blaCBP	bla-A	blaCBP	NF000517.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CBP family penicillin-hydrolyzing class A beta-lactamase
+blaCDD	bla-D	blaCDD	NF033866.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CDD family class D beta-lactamase
+blaCFE	blaCMY	blaCFE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-2 family cephalosporin-hydrolyzing class C beta-lactamase
+blaCGA	bla-A_Chryseo	blaCGA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CGA family class A extended-spectrum beta-lactamase
+blaCIA	bla-A_Chryseo	blaCIA	NF000446.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CIA family class A extended-spectrum beta-lactamase
+blaCKO	bla-A	blaCKO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MAL/CKO family class A beta-lactamase
+blaCMA	blaCrA	blaCMA	NF033700.1	887.00	887.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	CMA family class C beta-lactamase
+blaCME	bla-A2	blaCME	NF000511.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CME family class A extended-spectrum beta-lactamase
+blaCMH	blaACT	blaCMH	NF000419.2	875.00	875.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CMH family class C beta-lactamase
+blaCMY-FOX	bla-C	ampC	NF012172.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FOX/MOX family class C beta-lactamase
+blaCMY	CMY2-MIR-ACT-EC	blaCMY	NF000191.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-2 family class C beta-lactamase
+blaCPS	bla-B3	blaCPS	NF000454.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CPS family subclass B3 metallo-beta-lactamase
+blaCRD3	bla-B3	blaCRD3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRD3 family subclass B3 metallo-beta-lactamase
+blaCRH	bla-A_carba	blaCRH	NF033211.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRH family carbapenem-hydrolyzing class A beta-lactamase
+blaCRP	bla-A_carba	blaCRP	NF040548.1	630.00	630.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CRP family carbapenem-hydrolyzing class A beta-lactamase
+blaCSA	blaCrA	blaCSA	NF033698.1	884.00	884.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	CSA family class C beta-lactamase
+blaCSP	bla-A2	blaCSP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CSP family class A beta-lactamase
+blaCTX-M-151_fam	bla-A	blaCTX-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CTX-M-151 family class A beta-lactamase
+blaCTX-M	bla-A	blaCTX-M	NF033089.1	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CTX-M family class A extended-spectrum beta-lactamase
+blaCVI	bla-B2	blaCVI	NF038046.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CVI family subclass B2 metallo-beta-lactamase
+blaCrA	bla-C	ampC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CrA family class C beta-lactamase
+blaDES	bla-A	blaDES	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	DES family class A beta-lactamase
+blaDHA	bla-C	blaDHA	NF012102.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	DHA family class C beta-lactamase
+blaDHT2	bla-B3	blaDHT2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DHT2 family subclass B3 metallo-beta-lactamase
+blaDIM-SIM-IMP	bla-B1	blaDIM	NF012145.1	288.00	288.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DIM/SIM/IMP family subclass B1 metallo-beta-lactamase
+blaDIM	blaDIM-SIM-IMP	blaDIM	NF000445.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	DIM family subclass B1 metallo-beta-lactamase
+blaEAM	bla-B3	blaEAM	NF040470.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EAM family subclass B3 metallo-beta-lactamase
+blaEBR	blaB-IND-MUS	blaEBR	NF000444.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	EBR family subclass B1 metallo-beta-lactamase
+blaECM	bla-B3	blaECM	NF040468.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ECM family subclass B3 metallo-beta-lactamase
+blaECV	bla-B1	blaECV	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ECV family subclass B1 metallo-beta-lactamase
+blaEC	CMY2-MIR-ACT-EC	blaEC	NF000185.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaEC family class C beta-lactamase
+blaEFM	bla-B3	blaEFM	NF040469.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	EFM family subclass B3 metallo-beta-lactamase
+blaELM	bla-B3	blaELM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ELM family subclass B3 metallo-beta-lactamase
+blaERP	bla-A	blaERP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ERP family class A beta-lactamase
+blaESP	bla-B3	blaESP	NF000455.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ESP-1 family subclass B3 metallo-beta-lactamase
+blaEVM	bla-B3	blaEVM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EVM family subclass B3 metallo-beta-lactamase
+blaE	bla-C	blaE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class C beta-lactamase
+blaFAR	bla-A	blaFAR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FAR family class A beta-lactamase
+blaFEZ	bla-B3	blaFEZ	NF000216.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FEZ family subclass B3 metallo-beta-lactamase
+blaFIA	bla-B1	blaFIA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FIA family subclass B1 metallo-beta-lactamase
+blaFIM	bla-B1	blaFIM	NF000437.2	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FIM family subclass B1 metallo-beta-lactamase
+blaFONA	bla-A	blaFONA	NF000323.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FONA family class A beta-lactamase
+blaFOX	blaCMY-FOX	blaFOX	NF000399.2	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	FOX family cephalosporin-hydrolyzing class C beta-lactamase
+blaFPH	bla-A	blaFPH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FPH family carbapenem-hydrolyzing class A beta-lactamase
+blaFRI	bla-A_carba	blaFRI	NF000428.4	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	FRI family carbapenem-hydrolyzing class A beta-lactamase
+blaFTU	bla-A	blaFTU	NF000513.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	FTU family class A beta-lactamase
+blaF	bla-A	blaF	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaGES	bla-A	blaGES	NF012103.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	GES family class A beta-lactamase
+blaGIL	bla-A	blaGIL	NF000505.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	GIL family class A beta-lactamase
+blaGIM	blaDIM-SIM-IMP	blaGIM	NF000396.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GIM family subclass B1 metallo-beta-lactamase
+blaGMB	bla-B1	blaGMB	NF038103.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GMB family subclass B1 metallo-beta-lactamase
+blaGOB	bla-B3	blaGOB	NF012101.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GOB family subclass B3 metallo-beta-lactamase
+blaGPC	blaBKC_GPC	blaGPC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GPC family carbapenem-hydrolyzing class A beta-lactamase
+blaGRD23	blaDIM-SIM-IMP	blaGRD23	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GRD23 family subclass B1 metallo-beta-lactamase
+blaGRD33	bla-B3	blaGRD33	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	GRD33 family subclass B3 metallo-beta-lactamase
+blaHER	bla-A	blaHER	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HER family class A beta-lactamase
+blaHMB	blaKHM-HMB	blaHMB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMB family subclass B1 metallo-beta-lactamase
+blaIDC	bla-C	blaIDC	NF038069.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	IDC family class C beta-lactamase
+blaIMI	bla-A_carba	blaIMI	NF000400.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IMI family carbapenem-hydrolyzing class A beta-lactamase
+blaIMP	blaDIM-SIM-IMP	blaIMP	NF012147.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IMP family subclass B1 metallo-beta-lactamase
+blaIND	blaB-IND-MUS	blaIND	NF012149.0	430.00	430.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	IND family subclass B1 metallo-beta-lactamase
+blaI_gen	AMR	blaI	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactamase repressor
+blaI_of_Z	blaI_gen	blaI	NF000186.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	penicillinase repressor BlaI
+blaJOHN	bla-B1-FLAV	blaJOHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	JOHN family subclass B1 metallo-beta-lactamase
+blaKHM-HMB	blaDIM-SIM-IMP	blaKHM-HMB	NF012148.0	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KHM/HMB family subclass B1 metallo-beta-lactamase
+blaKHM	blaKHM-HMB	blaKHM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KHM family subclass B1 metallo-beta-lactamase
+blaKLUC	blaCTX-M	blaKLUC	NF000452.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	KLUC family class A extended-spectrum beta-lactamase
+blaKPC	bla-A_carba	blaKPC	NF012141.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	KPC family carbapenem-hydrolyzing class A beta-lactamase
+blaL1	bla-B3	blaL1	NF033106.1	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	L1 family subclass B3 metallo-beta-lactamase
+blaL2	bla-A	blaL2	NF000232.1	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	L2 family class A beta-lactamase
+blaLAP	bla-A	blaLAP	NF000383.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LAP family class A beta-lactamase
+blaLAQ	CMY2-MIR-ACT-EC	blaLAQ	NF040478.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LAQ family class C beta-lactamase
+blaLAT	blaCMY	blaLAT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase
+blaLCR_NPS	blaOXA	blaLCR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LCR/NPS family class D beta-lactamase
+blaLCR	blaLCR_NPS	blaLCR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LCR family class D beta-lactamase
+blaLEN	blaSHV-LEN	blaLEN	NF000233.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LEN family class A beta-lactamase
+blaLHK	bla-C	blaLHK	NF033569.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LHK family class C beta-lactamase
+blaLMB	bla-B3	blaLMB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	LMB family subclass B3 metallo-beta-lactamase
+blaLRA-10_fam	bla-C	blaLRA10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA10 family class C beta-lactamase
+blaLRA-12_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA12 family subclass B3 metallo-beta-lactamase
+blaLRA-12	blaLRA-12_fam	blaLRA12	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA12 family subclass B3 metallo-beta-lactamase
+blaLRA-13	bla-C	blaLRA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA13 family bifunctional class D/class C beta-lactamase
+blaLRA-17	blaLRA-12_fam	blaLRA17	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA17 family subclass B3 metallo-beta-lactamase
+blaLRA-18_fam	bla-C	blaLRA18	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA18 family class C beta-lactamase
+blaLRA-19	blaLRA-12_fam	blaLRA19	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA19 family subclass B3 metallo-beta-lactamase
+blaLRA-1	bla-A	blaLRA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA1 family class A beta-lactamase
+blaLRA-2_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA2 family subclass B3 metallo-beta-lactamase
+blaLRA-2	blaLRA-2_fam	blaLRA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA2 family subclass B3 metallo-beta-lactamase
+blaLRA-3_fam	bla-B3	blaLRA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA3 family subclass B3 metallo-beta-lactamase
+blaLRA-3	blaLRA-3_fam	blaLRA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA3 family subclass B3 metallo-beta-lactamase
+blaLRA-5	bla-A	blaLRA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA5 family class A beta-lactamase
+blaLRA-7	blaLRA-3_fam	blaLRA7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA7 family subclass B3 metallo-beta-lactamase
+blaLRA-8	blaLRA-2_fam	blaLRA8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA8 family subclass B3 metallo-beta-lactamase
+blaLRA-9	blaLRA-3_fam	blaLRA9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LRA9 family subclass B3 metallo-beta-lactamase
+blaLRG	bla-A	blaLRG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	LRG family class A beta-lactamase
+blaLUS	bla-A2	blaLUS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	LUS family class A beta-lactamase
+blaLUT	bla-A	blaLUT	NF000324.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	LUT family class A beta-lactamase
+blaL	bla-A	blaL	NF033101.0	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaL family class A beta-lactamase
+blaM-1	blaM	blaM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaMCA	bla-C	blaMCA	NF033406.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MCA family class C beta-lactamase
+blaMIR	blaACT	blaMIR	NF000187.3	882.00	882.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	MIR family cephalosporin-hydrolyzing class C beta-lactamase
+blaMOC	blaMUS-TUS-MOC	blaMOC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	XUS family subclass B1 metallo-beta-lactamase
+blaMOX	blaCMY-FOX	blaMOX	NF000239.3	770.00	770.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CMY-1/MOX family class C beta-lactamase
+blaMSI-1_fam	bla-B3	blaMSI	NF000456.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MSI-1 family subclass B3 metallo-beta-lactamase
+blaMUS-TUS-MOC	blaB-IND-MUS	bla	NF012137.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	MUS/TUS/MOC family subclass B1 metallo-beta-lactamase
+blaMUS	blaMUS-TUS-MOC	blaMUS	NF000441.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MUS family subclass B1 metallo-beta-lactamase
+blaMYO	bla-B1	blaMYO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MYO family subclass B1 metallo-beta-lactamase
+blaMYX	bla-B1	blaMYX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	MYX family subclass B1 metallo-beta-lactamase
+blaM	bla-A	blaM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaNDM	bla-B1	blaNDM	NF000259.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	NDM family subclass B1 metallo-beta-lactamase
+blaNPS	blaLCR_NPS	blaNPS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	NPS family class D beta-lactamase
+blaOCH	bla-C	blaOCH	NF000264.2	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	OCH family class C extended-spectrum beta-lactamase
+blaOHIO	blaSHV-LEN	blaOHIO	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	OHIO family class A beta-lactamase
+blaOKP-A	blaOKP	blaOKP-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-A family class A broad-spectrum beta-lactamase
+blaOKP-B	blaOKP	blaOKP-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-B family class A broad-spectrum beta-lactamase
+blaOKP-C	blaSHV-LEN	blaOKP-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-C family class A broad-spectrum beta-lactamase
+blaOKP-D	blaSHV-LEN	blaOKP-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP-D family class A broad-spectrum beta-lactamase
+blaOKP	blaSHV-LEN	blaOKP	NF000265.2	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OKP family class A broad-spectrum beta-lactamase
+blaORN	blaPLA-ORN-TER	blaORN	NF038401.1	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ORN family class A beta-lactamase
+blaORR	bla-B1	blaORR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ORR family subclass B1 metallo-beta-lactamase
+blaOXA-1036_fam	blaOXA	blaOXA	NF040529.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-1036 family class D beta-lactamase
+blaOXA-10_fam	blaOXA	blaOXA	NF000386.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-10 family class D beta-lactamase
+blaOXA-114_fam	blaOXA-PR	blaOXA	NF033818.0	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-114 family class D beta-lactamase
+blaOXA-12_fam	blaOXA-PR	blaOXA	NF033702.0	595.00	595.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-12 family class D beta-lactamase
+blaOXA-134_fam	blaOXA	blaOXA	NF000436.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-143_fam	blaOXA	blaOXA	NF000464.2	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-143 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-184_fam	blaOXA_Campy	blaOXA	NF000461.2	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-184 family class D beta-lactamase
+blaOXA-1_fam	blaOXA	blaOXA	NF000388.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-1 family class D beta-lactamase
+blaOXA-211_fam	blaOXA	blaOXA	NF000417.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-213_fam	blaOXA	blaOXA	NF000269.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-213 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-214_fam	blaOXA	blaOXA	NF000418.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-214 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-229_fam	blaOXA	blaOXA	NF000501.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-229 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-22_fam	blaOXA-PR	blaOXA	NF033509.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-22 family class D beta-lactamase
+blaOXA-23_fam	blaOXA	blaOXA	NF000266.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-24_fam	blaOXA	blaOXA	NF000434.2	615.00	615.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-24 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-266_fam	blaOXA	blaOXA	NF033653.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-266 family class D beta-lactamase
+blaOXA-274_fam	blaOXA	blaOXA	NF033648.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-274 family class D beta-lactamase
+blaOXA-286_fam	blaOXA	blaOXA	NF000520.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-286 family class D beta-lactamase
+blaOXA-294_fam	blaOXA	blaOXA	NF038386.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-294 family class D beta-lactamase
+blaOXA-2_fam	blaOXA	blaOXA	NF000267.2	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-2 family class D beta-lactamase
+blaOXA-364_fam	blaOXA-PR	blaOXA	NF033815.0	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-364 family class D beta-lactamase
+blaOXA-372_fam	blaOXA	blaOXA	NF000415.2	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-372 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-427_fam	blaOXA-PR	blaOXA	NF038217.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-427 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-42_fam	blaOXA-PR	blaOXA	NF040531.1	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-42 family class D beta-lactamase
+blaOXA-46_fam	blaOXA	blaOXA	NF033104.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-46 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-48_fam	blaOXA	blaOXA	NF000387.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-48 family class D beta-lactamase
+blaOXA-493_fam	blaOXA_Campy	blaOXA	NF000462.2	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-493 family class D beta-lactamase
+blaOXA-50_fam	blaOXA	blaOXA	NF000432.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-51_fam	blaOXA	blaOXA	NF000268.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-542_fam	blaOXA	blaOXA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-542 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-548_fam	blaOXA	blaOXA	NF040530.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-548 family class D beta-lactamase
+blaOXA-55_fam	blaOXA	blaOXA	NF033667.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-55 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-576_fam	blaOXA_Campy	blaOXA	NF033613.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-576 family class D beta-lactamase
+blaOXA-58_fam	blaOXA	blaOXA	NF000500.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-58 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-5_fam	blaOXA	blaOXA	NF040527.1	585.00	585.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-5 family class D beta-lactamase
+blaOXA-60_fam	blaOXA	blaOXA	NF000395.3	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-61_fam	blaOXA_Campy	blaOXA	NF000435.2	540.00	540.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-61 family class D beta-lactamase
+blaOXA-62_fam	blaOXA	blaOXA	NF000430.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-62 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-63_fam	blaOXA	blaOXA	NF000429.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-63 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-679_fam	blaOXA	blaOXA	NF038333.1	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	OXA-679 family carbapenem-hydrolyzing class D beta-lactamase
+blaOXA-727_fam	blaOXA	blaOXA	NF033666.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-727 family class D beta-lactamase
+blaOXA-85_fam	blaOXA	blaOXA	NF000502.2	550.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase
+blaOXA-919_fam	blaOXA-PR	blaOXA	NF038183.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-919 family class D beta-lactamase
+blaOXA-9_fam	blaOXA-PR	blaOXA	NF040532.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXA-9 family class D beta-lactamase
+blaOXA-PR	bla-D	blaOXA	NF000270.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXA_Campy	blaOXA	blaOXA	NF000463.2	390.00	390.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXA	bla-D	blaOXA	NF012161.0	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class D beta-lactamase
+blaOXY-1	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-1 family class A extended-spectrum beta-lactamase
+blaOXY-2	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-2 family class A extended-spectrum beta-lactamase
+blaOXY-3	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-3 family class A extended-spectrum beta-lactamase
+blaOXY-4	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-4 family class A extended-spectrum beta-lactamase
+blaOXY-5	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-5 family class A extended-spectrum beta-lactamase
+blaOXY-6	blaOXY	blaOXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY-6 family class A extended-spectrum beta-lactamase
+blaOXY	bla-A	blaOXY	NF000271.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	OXY family class A extended-spectrum beta-lactamase
+blaPAC	bla-C	blaPAC	NF033159.0	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PAC family class C beta-lactamase
+blaPAD	bla-A	blaPAD	NF040472.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PAD family carbapenem-hydrolyzing class A beta-lactamase
+blaPAM	bla-B3	blaPAM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PAM family subclass B3 metallo-beta-lactamase
+blaPAU	bla-A	blaPAU	NF033867.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PAU family class A beta-lactamase
+blaPDC_gen	bla-C	blaPDC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC family class C beta-lactamase
+blaPDC_var	blaPDC_gen	blaPDC	NF000519.2	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC variant family class C beta-lactamase
+blaPDC	blaPDC_gen	blaPDC	NF000422.6	865.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PDC family class C beta-lactamase
+blaPEDO-1_fam	bla-B3	blaB3PEDO	NF000457.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-1 family subclass B3 metallo-beta-lactamase
+blaPEDO-2_fam	bla-B3	blaB3PEDO	NF000458.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-2 family subclass B3 metallo-beta-lactamase
+blaPEDO-3_fam	blaB-IND-MUS	blaB1PEDO	NF000453.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PEDO-3 family subclass B1 metallo-beta-lactamase
+blaPER	bla-A2	blaPER	NF000389.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PER family class A extended-spectrum beta-lactamase
+blaPFM	blaSFH_gen	blaPFM	NF038003.1	555.00	555.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PFM family subclass B2 metallo-beta-lactamase
+blaPLA-ORN-TER	bla-A	bla	NF000275.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PLA/ORN/TER family class A beta-lactamase
+blaPLA	blaPLA-ORN-TER	blaPLA	NF038398.1	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PLA family class A beta-lactamase
+blaPLN	bla-B3	blaPLN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PLN family subclass B3 metallo-beta-lactamase
+blaPME	bla-A	blaPME	NF000414.2	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PME family class A beta-lactamase
+blaPNGM	bla-B	blaPNGM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PNGM family subclass B3-like metallo-beta-lactamase
+blaPOM	bla-B3	blaPOM	NF000438.2	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	POM family subclass B3 metallo-beta-lactamase
+blaPSE	blaCARB_gen	blaPSE	NF000480.2	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PSE family carbenicillin-hydrolyzing class A beta-lactamase
+blaPST	blaDIM-SIM-IMP	blaPST	NF033584.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	PST family subclass B1 metallo-beta-lactamase
+blaPSV	bla-A	blaPSV	NF033174.0	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PSV family class A beta-lactamase
+blaP	bla-A_firm	blaP	NF012156.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase BlaP
+blaR1-2	blaR1	blaR1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactam sensor/signal transducer BlaR1
+blaR1_gen	AMR	blaR1	NF000326.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaR1 family beta-lactam sensor/signal transducer
+blaR1	blaR1_gen	blaR1	NF033108.1	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactam sensor/signal transducer BlaR1
+blaR39	bla-A	blaR39	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaRAA	bla-A2	blaRAA	NF040467.1	590.00	590.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RAA family extended-spectrum beta-lactamase
+blaRAHN	bla-A	blaRAHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RAHN family class A beta-lactamase
+blaRCP	bla-A	blaRCP	NF033466.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RCP family class A beta-lactamase
+blaRHO	bla-C	blaRHO	NF033575.1	825.00	825.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RHO family class C beta-lactamase
+blaROB	bla-A	blaROB	NF033568.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ROB family class A beta-lactamase
+blaRSA1	bla-A	blaRSA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RSA1 family class A beta-lactamase
+blaRSA2	bla-A	blaRSA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	RSA2 family carbapenem-hydrolyzing class A beta-lactamase
+blaRSC1	bla-C	blaRSC1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	RSC1 family class C beta-lactamase
+blaRSD1	blaOXA	blaRSD1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RSD1 family class D beta-lactamase
+blaRSD2	blaOXA	blaRSD2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RSD2 family class D beta-lactamase
+blaRTG	blaCARB_gen	blaRTG	NF000284.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RTG family carbenicillin-hydrolyzing class A beta-lactamase
+blaRUB	bla-A	blaRUB	NF033204.1	635.00	635.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	RUB family class A broad-spectrum beta-lactamase
+blaRm3	bla-B3	blaRm3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B3 metallo-beta-lactamase Rm3
+blaSCO	bla-A	blaSCO	NF000327.2	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SCO family class A beta-lactamase
+blaSED	bla-A	blaSED	NF000328.2	570.00	570.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SED family class A beta-lactamase
+blaSFC	bla-A_carba	blaSFC	NF040547.1	680.00	680.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SFC family carbapenem-hydrolyzing class A beta-lactamase
+blaSFDC	CMY2-MIR-ACT-EC	blaSFDC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	SFDC family class C beta-lactamase
+blaSFH_gen	bla-B2	bla	NF012225.0	440.00	440.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SFH-related subclass B2 metallo-beta-lactamase
+blaSFH	blaSFH_gen	blaSFH	NF012224.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SFH family subclass B2 metallo-beta-lactamase
+blaSGM	bla-A	blaSGM	NF000512.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SGM family class A beta-lactamase
+blaSHN	bla-B1	blaSHN	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SHN family subclass B1 metallo-beta-lactamase
+blaSHV-LEN	bla-A	blaSHV	NF012143.0	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHV/LEN/OKP family class A beta-lactamase
+blaSHV	blaSHV-LEN	blaSHV	NF000285.3	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHV family class A beta-lactamase
+blaSHW	blaDIM-SIM-IMP	blaSHW	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SHW family subclass B1 metallo-beta-lactamase
+blaSIM	blaDIM-SIM-IMP	blaSIM	NF000426.2	560.00	560.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SIM family subclass B1 metallo-beta-lactamase
+blaSMB	bla-B3	blaSMB	NF000287.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SMB-1 family subclass B3 metallo-beta-lactamase
+blaSME	bla-A_carba	blaSME	NF012142.0	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SME family carbapenem-hydrolyzing class A beta-lactamase
+blaSPG-1_fam	bla-B3	blaSPG	NF000459.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPG-1 family subclass B3 metallo-beta-lactamase
+blaSPM	bla-B1	blaSPM	NF012150.3	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPM family subclass B1 metallo-beta-lactamase
+blaSPN79	bla-B1	blaSPN79	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPN79 family subclass B1 metallo-beta-lactamase
+blaSPR	HARLDQ_not_B3	blaSPR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	SPR family putative metallo-beta-lactamase
+blaSPS	bla-B1	blaSPS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	SPS family subclass B1 metallo-beta-lactamase
+blaSRT	bla-C	blaSRT	NF000423.2	860.00	860.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	SRT/SST family class C beta-lactamase
+blaSTA	bla-B1	blaSTA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	STA family subclass B1 metallo-beta-lactamase
+blaS	bla-A	blaS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+blaTEM	bla-A	blaTEM	NF000531.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TEM family class A beta-lactamase
+blaTER	blaPLA-ORN-TER	blaTER	NF038400.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TER family class A beta-lactamase
+blaTHIN-B	blaTHIN	blaTHIN-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B3 metallo-beta-lactamase THIN-B
+blaTHIN	bla-B3	blaTHIN	NF000440.2	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	THIN family subclass B3 metallo-beta-lactamase
+blaTLA2	bla-A2	tla2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TLA2 family class A extended-spectrum beta-lactamase
+blaTLA	bla-A2	blaTLA	NF000298.2	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	TLA family class A extended-spectrum beta-lactamase
+blaTMB	blaDIM-SIM-IMP	blaTMB	NF000443.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TMB family subclass B1 metallo-beta-lactamase
+blaTRU	blaCMY-FOX	blaTRU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TRU family class C beta-lactamase
+blaTTU	blaDIM-SIM-IMP	blaTTU	NF033585.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TTU family subclass B1 metallo-beta-lactamase
+blaTUS	blaMUS-TUS-MOC	blaTUS	NF000442.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	TUS family subclass B1 metallo-beta-lactamase
+blaVAM	bla-B1	blaVAM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VAM family subclass B1 metallo-beta-lactamase
+blaVCC	bla-A_carba	blaVCC	NF000518.2	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VCC family carbapenem-hydrolyzing class A beta-lactamase
+blaVEB	bla-A2	blaVEB	NF000390.2	670.00	670.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	VEB family class A extended-spectrum beta-lactamase
+blaVHH	blaCARB_gen	blaVHH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	VHH family class A beta-lactamase
+blaVHW	blaCARB_gen	blaVHW	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	VHW family class A beta-lactamase
+blaVIM	bla-B1	blaVIM	NF012100.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VIM family subclass B1 metallo-beta-lactamase
+blaVMB	bla-B1	blaVMB	NF038184.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VMB family subclass B1 metallo-beta-lactamase
+blaYEM	bla-B2	blaYEM	NF038166.1	535.00	535.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	YEM family subclass B2 metallo-beta-lactamase
+blaYRC	CMY2-MIR-ACT-EC	blaYRC	NF038089.1	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	YRC family class C beta-lactamase
+blaZ-mecC	blaZ_gen	blaZ	NF033140.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ
+blaZOG	bla-B1	blaZOG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	ZOG family subclass B1 metallo-beta-lactamase
+blaZ_gen	bla-A	bla	NF033141.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BlaZ-like penicillin-hydrolyzing class A beta-lactamase
+blaZ	blaZ_gen	blaZ	NF033139.1	580.00	580.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	penicillin-hydrolyzing class A beta-lactamase BlaZ
+bla	AMR	bla	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	beta-lactamase
+ble-MBL	sequest	ble	NF012202.0	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein Ble-MBL
+ble-Sh	ble	ble-Sh	NF000489.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	phleomycin/bleomycin binding protein Ble-Sh
+ble-Sv	ble	ble	NF000028.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMA family bleomycin binding protein
+bleO	sequest	bleO	NF000027.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein
+ble_BLMT_gen	sequest	ble	NF000005.4	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMT family bleomycin binding protein
+ble_Tn5	ble_BLMT_gen	ble	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein BLMT
+ble	sequest	ble	NF033156.1	140.00	140.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLMA family bleomycin binding protein
+blmA	ble	blmA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein BLMA
+blmB_tlmB	AMR	blmB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase
+blmB	blmB_tlmB	blmB	NF000483.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase BlmB
+bmaE	VIRULENCE_Ecoli	bmaE	-	0.00	0.00	87.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			M agglutinin-type afimbrial adhesin BmaE/AfaE-8
+cadA_Lm	P-type_ATPase	cadA	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium-translocating P-type ATPase CadA
+cadC_Lm	HTH_5	cadC	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	Cd(II)-sensing metalloregulatory transcriptional repressor CadC
+cadC_Sa	HTH_5	cadC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC
+cadD	METAL	cadD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium resistance transporter CadD
+cadR	METAL	cadR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM	CADMIUM	cadmium resistance transcriptional regulator CadR
+capU	VIRULENCE_Ecoli	capU	-	0.00	0.00	92.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			putative hexosyltransferase CapU
+car(A)	abcf-produ	car(A)	NF000166.1	1050.00	1050.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Car(A)
+cat-TC	catA9	cat-TC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-9 chloramphenicol O-acetyltransferase Cat-TC
+cat86	catA6	cat86	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-6 chloramphenicol O-acetyltransferase Cat86
+catA10	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-10 chloramphenicol O-acetyltransferase
+catA11	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase
+catA13	catA	catA13	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-13 chloramphenicol O-acetyltransferase
+catA14	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-14 chloramphenicol O-acetyltransferase
+catA15	catA	catA15	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-15 chloramphenicol acetyltransferase CatA15
+catA16	catA	catA16	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-16 chloramphenicol O-acetyltransferase CatQ
+catA1	catA	catA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-1 chloramphenicol O-acetyltransferase
+catA2	catA	catA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-2 chloramphenicol O-acetyltransferase CatII
+catA3	catA	catA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-3 chloramphenicol O-acetyltransferase CatIII
+catA4	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-4 chloramphenicol O-acetyltransferase
+catA5	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-5 chloramphenicol O-acetyltransferase
+catA6	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-6 chloramphenicol O-acetyltransferase
+catA7	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-7 chloramphenicol O-acetyltransferase
+catA8	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-8 chloramphenicol O-acetyltransferase
+catA9	catA	catA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-9 chloramphenicol O-acetyltransferase
+catA	cat	catA	NF000491.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase
+catB10	catB	catB10	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase CatB10
+catB1	catB	catB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-1 chloramphenicol O-acetyltransferase CatB1
+catB2	catB	catB2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-2 chloramphenicol O-acetyltransferase CatB2
+catB3	catB	catB3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-3 chloramphenicol O-acetyltransferase CatB3
+catB7	catB	catB7	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-4 chloramphenicol O-acetyltransferase CatB7
+catB8	catB	catB8	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-3 chloramphenicol O-acetyltransferase CatB8
+catB9	catB	catB9	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B-5 chloramphenicol O-acetyltransferase CatB9
+catB	cat	catB	NF000490.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase
+catC	cat	catC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type B chloramphenicol O-acetyltransferase
+catD	catA11	catD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase CatD
+catP	catA11	catP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A-11 chloramphenicol O-acetyltransferase CatP
+catU	catA	catU	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase
+catV	catA	catV	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	type A chloramphenicol O-acetyltransferase CatV
+cat	AMR	cat	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol O-acetyltransferase CAT
+cblA	bla-A2	cblA	NF033098.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CblA family class A beta-lactamase
+cdtB_III	cdtB	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type III/V nuclease subunit CdtB
+cdtB_II	cdtB	cdtB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type II nuclease subunit CdtB
+cdtB_IV	cdtB	cdtB	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type IV nuclease subunit CdtB
+cdtB_I	cdtB	cdtB	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin type I nuclease subunit CdtB
+cdtB_Salmo	VIRULENCE	cdtB	-	0.00	0.00	81.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin S-CDT
+cdtB	VIRULENCE_Ecoli	cdtB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			cytolethal distending toxin nuclease subunit CdtB
+cepA	bla-A2	cepA	NF033102.1	660.00	660.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	CepA family class A extended-spectrum beta-lactamase
+cepH	blaCMY-FOX	cepH	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase CepH
+cepS	blaCMY-FOX	cepS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	cephalosporin-hydrolyzing class C beta-lactamase CepS
+cfaC	VIRULENCE_Ecoli	cfaC	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			CFA/I pilus usher protein CfaC
+cfiA_fam	bla-B1	cfiA	NF000322.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CfiA family subclass B1 metallo-beta-lactamase
+cfr(B)	cfr_gen	cfr(B)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(B)
+cfr(C)	cfr_gen	cfr(C)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(C)
+cfr(D)	cfr_gen	cfr(D)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(D)
+cfr(E)	cfr_gen	cfr(E)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(E)
+cfr-Cb	cfr_gen	cfr	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase
+cfr_gen	AMR	cfr	NF000424.3	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase
+cfr	cfr_gen	cfr	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr
+cfxA2	cfxA_fam	cfxA2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA2
+cfxA3	cfxA_fam	cfxA3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA3
+cfxA4	cfxA_fam	cfxA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A extended-spectrum beta-lactamase CfxA4
+cfxA5	cfxA_fam	cfxA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA5
+cfxA6	cfxA_fam	cfxA6	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA6
+cfxA_fam	bla-A2	cfxA	NF033100.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	CfxA family class A broad-spectrum beta-lactamase
+cfxA	cfxA_fam	cfxA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A broad-spectrum beta-lactamase CfxA
+chrA	METAL	chrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CHROMATE	CHROMATE	chromate resistance efflux protein ChrA
+chrB_rRNA_meth	rlmA(II)_gen	chrB	NF000488.1	620.00	620.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase ChrB
+chrR_I	METAL	chrR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CHROMATE	CHROMATE	class I chromate reductase ChrR
+cif	VIRULENCE_Ecoli	cif	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector Cif
+cipA	cfr_gen	cipA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase CipA
+clbA	cfr_gen	clbA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA
+clbB	cfr_gen	clbB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB
+clbC	cfr_gen	clbC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbC
+cmlA1	cmlA	cmlA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA1
+cmlA4	cmlA	cmlA4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA4
+cmlA5	cmlA	cmlA5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlA5
+cmlA_floR	MFS_efflux_CHL	cml	NF033134.0	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	CmlA/FloR family chloramphenicol efflux MFS transporter
+cmlA	cmlA_floR	cmlA	NF000509.1	875.00	835.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	CmlA family chloramphenicol efflux MFS transporter
+cmlB1	cmlA_floR	cmlB1	NF012203.0	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlB1
+cmlB	cmlA_floR	cmlB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlB
+cmlR	cmx_cmrA	cmlR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlR
+cmlV	cmx_cmrA	cmlV	NF012199.0	830.00	830.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmlV
+cml_Ensi	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cml_Myxo	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cml_Ochro	cmlA_floR	cml	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cml family chloramphenicol efflux MFS transporter
+cmrA	cmx_cmrA	cmrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter CmrA
+cmx_cmrA	MFS_efflux_CHL	cmx_cmrA	NF033135.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	Cmx/CmrA family chloramphenicol efflux MFS transporter
+cmx	cmx_cmrA	cmx	NF000510.1	800.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol efflux MFS transporter Cmx
+cna	VIRULENCE_Saur	cna	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			collagen adhesin Cna
+cnf1	cnf_gen	cnf1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF1
+cnf2	cnf_gen	cnf2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF2
+cnf3	cnf_gen	cnf3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cytotoxic necrotizing factor CNF3
+cnf_gen	VIRULENCE_Ecoli	cnf	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			CNF1 family cytotoxic necrotizing factor
+cnrA	METAL-RND-IM	cnrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel efflux RND transporter permease subunit CnrA
+cnrC	METAL	cnrC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel efflux RND transporter outer membrane subunit CnrC
+cnrT	METAL	cnrT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel diffusion facilitator CnrT
+cnrY	METAL	cnrY	-	0.00	0.00	80.00	90.00	90.00	81.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance system anti-sigma factor CnrY
+cofA	pilus	cofA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type IV pilus CFA/III major pilin
+copA_Ehir	P-type_ATPase	copA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-translocating P-type ATPase CopA
+copB_Ehir	P-type_ATPase	copB	-	0.00	0.00	77.00	90.00	90.00	80.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver-translocating P-type ATPase CopB
+copC_Psyr	copC	copC	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper homeostasis periplasmic binding protein CopC
+copC	METAL	copC	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			copper homeostasis periplasmic binding protein CopC
+copD	METAL	copD	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			copper homeostasis membrane protein CopD
+copL	METAL	copL	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	transcriptional regulator CopL
+copP	METAL	copP	NF033781.1	112.00	112.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	copper-binding metallochaperone CopP
+copR_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CopR family heavy metal response regulator
+copR	copR_gen	copR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	heavy metal response regulator transcription factor CopR
+copS	METAL	copS	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance membrane spanning protein CopS
+cpa	VIRULENCE_Cperf	cpa	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			alpha-toxin
+cpb2	VIRULENCE_Cperf	cpb2	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-2 toxin CPB2
+cpb	VIRULENCE_Cperf	cpb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-channel forming cytolysin CPB
+cpd	VIRULENCE_Cperf	cpd	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			beta-channel forming cytolysin CPD
+cpe	VIRULENCE_Cperf	cpe	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterotoxin CPE
+cphA1	cphA	cphA1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	subclass B2 metallo-beta-lactamase CphA1
+cphA	bla-B2	cphA	NF000329.2	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	CphA family subclass B2 metallo-beta-lactamase
+cpt	AMR	cpt	NF033114.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL	chloramphenicol phosphotransferase CPT
+crcB	BIOCIDE	crcB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	fluoride efflux transporter CrcB
+crpP	AMR	crpP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FLUOROQUINOLONE	FLUOROQUINOLONE	ciprofloxacin resistance protein CrpP
+cueA	P-type_ATPase	cueA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance metal-translocating P1-type ATPase CueA
+cusB_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			CusB family metal efflux RND transporter periplasmic adaptor subunit
+cvaC	VIRULENCE_Ecoli	cvaC	-	0.00	0.00	83.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			colicin V
+dfr1_rpt	dfrA	dfrA	NF000008.1	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant repeat-containing dihydrofolate reductase DfrA1
+dfrA10	dfr_gen	dfrA10	NF000018.2	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA10
+dfrA12_A21	dfr_gen	dfrA	NF000055.3	330.00	330.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	DfrA12/DfrA21 family trimethoprim-resistant dihydrofolate reductase
+dfrA12	dfrA12_A21	dfrA12	NF000053.2	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA12
+dfrA14	dfrA	dfrA14	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA14
+dfrA15	dfrA	dfrA15	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA15
+dfrA16	dfrA	dfrA16	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA16
+dfrA17	dfrA	dfrA17	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA17
+dfrA18	dfr_gen	dfrA18	NF000039.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA18
+dfrA19	dfr_gen	dfrA19	NF000041.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA19
+dfrA1	dfrA	dfrA1	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA1
+dfrA20	dfr_gen	dfrA20	NF000127.2	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA20
+dfrA21	dfrA12_A21	dfrA21	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA21
+dfrA22	dfrA12_A21	dfrA22	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA22
+dfrA23	dfr_gen	dfrA23	NF000134.2	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA23
+dfrA24	dfr_gen	dfrA24	NF000146.2	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA24
+dfrA25	dfrA	dfrA25	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA25
+dfrA26	dfr_gen	dfrA26	NF000006.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA26
+dfrA27	dfrA	dfrA27	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA27
+dfrA29	dfrA	dfrA29	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA29
+dfrA30	dfrA	dfrA30	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA30
+dfrA31	dfrA	dfrA31	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA31
+dfrA32	dfrA	dfrA32	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	20.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA32
+dfrA33	dfrA12_A21	dfrA33	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA33
+dfrA34	dfr_gen	dfrA34	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA34
+dfrA35	dfr_gen	dfrA35	NF033851.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA35
+dfrA36	dfr_gen	dfrA36	NF033868.0	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA36
+dfrA37	dfrA	dfrA37	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA37
+dfrA38	dfr_gen	dfrA38	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA38
+dfrA39	dfr_gen	dfrA39	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA39
+dfrA3b	dfr_gen	dfrA3b	NF000065.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA3b
+dfrA3	dfr_gen	dfrA3	NF000019.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA3
+dfrA42	dfr_gen	dfrA42	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA42
+dfrA43	dfr_gen	dfrA43	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA43
+dfrA44	dfr_gen	dfrA44	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA44
+dfrA46	dfrA	dfrA46	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA46
+dfrA47	dfrA12_A21	dfrA47	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA47
+dfrA48	dfrA	dfrA48	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA48
+dfrA4	dfr_gen	dfrA4	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA4
+dfrA5	dfrA	dfrA5	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA5
+dfrA6	dfrA	dfrA6	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA6
+dfrA7	dfrA	dfrA7	-	0.00	0.00	98.00	90.00	90.00	98.00	90.00	90.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA7
+dfrA8	dfr_gen	dfrA8	NF000126.2	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA8
+dfrA9	dfr_gen	dfrA9	NF000109.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA9
+dfrA	dfr_gen	dfrA	NF000330.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrA
+dfrB1	dfrB	dfrB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB1
+dfrB2	dfrB	dfrB2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB2
+dfrB4	dfrB	dfrB4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB4
+dfrB5	dfrB	dfrB5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB5
+dfrB	dfr_gen	dfrB	NF000331.1	160.00	160.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrB
+dfrC	dfr_gen	dfrC	NF000155.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrC
+dfrD	dfr_DGK	dfrD	NF000159.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrD
+dfrE	dfr_gen	dfrE	NF040541.1	347.00	347.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrE
+dfrF	dfr_gen	dfrF	NF000333.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrF
+dfrG	dfr_DGK	dfrG	NF000143.1	365.00	365.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrG
+dfrI	dfr_gen	dfrI	NF000012.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrI
+dfrK	dfr_DGK	dfrK	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase DfrK
+dfr_DGK	dfr_gen	dfr	NF000332.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	DfrD/DfrG/DfrK family trimethoprim-resistant dihydrofolate reductase
+dfr_gen	AMR	dfrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	trimethoprim-resistant dihydrofolate reductase
+dpsA	METAL	dpsA	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL			non-specific DNA-binding protein DpsA
+eae_typing_E._coli	VIRULENCE	eae	NF033627.3	1400.00	1400.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	INTIMIN	INTIMIN	intimin
+eat(A)	lsa	eat(A)	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	0	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN	ABC-F type ribosomal protection-like protein Eat(A)
+eatA	auto_tox	eatA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin EatA
+ednB	VIRULENCE_Saur	ednB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			epidermal cell differentiation inhibitor EdnB
+efa1	VIRULENCE_Ecoli	efa1	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			lymphostatin Efa1/LifA
+efflux_TF	EFFLUX	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			antibiotic efflux transcriptional regulator
+ehxA	VIRULENCE_Ecoli	ehxA	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterohemolysin EhxA
+eilA	VIRULENCE_Ecoli	eilA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			HilA family transcriptional regulator EilA
+emhA	RND-peri	emhA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter periplasmic adaptor subunit EmhA
+emhB	RND-IM	emhB	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter permease subunit EmhB
+emhC	adeC-K-oprM	emhC	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux RND transporter outer membrane subunit EmhC
+emrA-sm	MFS_efflux	emrA	-	0.00	0.00	88.00	90.00	90.00	88.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
+emrB-sm	MFS_efflux	emrB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter permease subunit EmrB
+emrC	RND-OM	emrC	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux transporter outer membrane subunit EmrC
+emrD3	MFS_efflux	emrD3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter EmrD-3
+emrD	MFS_efflux	emrD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter EmrD
+emtA_fam	AMR	emt	NF033398.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AVILAMYCIN	AVILAMYCIN	EmtA family 23S rRNA (guanine(2470)) methyltransferase
+emtA	emtA_fam	emtA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AVILAMYCIN	AVILAMYCIN	23S rRNA (guanine(2470)) methyltransferase EmtA
+epeA	auto_tox	epeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EpeA
+epsilon-1	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-2	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-3	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-4	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-6	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon-7	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	XI	intimin type xi
+epsilon-8	epsilon	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+epsilon	eae_typing_E._coli	eae	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	1	VIRULENCE	VIRULENCE	INTIMIN	EPSILON	intimin type epsilon
+ere(A)	ere	ere(A)	NF000208.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	EreA family erythromycin esterase
+ere(B)	ere	ere(B)	NF000209.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EreB family erythromycin esterase
+ere(D)	ere	ere(D)	NF000516.1	800.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EreD family erythromycin esterase
+ere	AMR	ere	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	erythromycin esterase
+erm(30)	erm-23S_rRNA	erm(30)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(30)
+erm(31)	erm-23S_rRNA	erm(31)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(31)
+erm(32)	rlmA(II)_gen	erm(32)	NF000133.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	23S rRNA (guanine(748)-N(1))-methyltransferase Erm(32)
+erm(33)	erm-23S_rRNA	erm(33)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(33)
+erm(34)	erm-23S_rRNA	erm(34)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)
+erm(35)	erm-23S_rRNA	erm(35)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(35)
+erm(36)	erm-23S_rRNA	erm(36)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(36)
+erm(37)	erm_gen	erm(37)	NF000468.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)
+erm(38)	erm-23S_rRNA	erm(38)	NF012218.0	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(38)
+erm(39)	erm-23S_rRNA	erm(39)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(39)
+erm(40)	erm-23S_rRNA	erm(40)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(40)
+erm(42)	erm-23S_rRNA	erm(42)	NF000077.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(42)
+erm(43)	erm-23S_rRNA	erm(43)	NF000412.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(43)
+erm(44)v	erm-23S_rRNA	erm(44)v	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(44)v
+erm(44)	erm-23S_rRNA	erm(44)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(44)
+erm(45)	erm-23S_rRNA	erm(45)	NF000411.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(45)
+erm(46)	erm-23S_rRNA	erm(46)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(46)
+erm(47)	erm-23S_rRNA	erm(47)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(47)
+erm(48)	erm-23S_rRNA	erm(48)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(48)
+erm(49)	erm-23S_rRNA	erm(49)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(49)
+erm(A)	erm-23S_rRNA	erm(A)	NF012222.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
+erm(B)	erm-23S_rRNA	erm(B)	NF012220.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)
+erm(C)	erm-23S_rRNA	erm(C)	NF012219.1	530.00	530.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)
+erm(D)	erm-23S_rRNA	erm(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(D)
+erm(E)	erm_SHROVE	erm(E)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(E)
+erm(F)	erm-23S_rRNA	erm(F)	NF012223.0	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)
+erm(G)	erm-23S_rRNA	erm(G)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)
+erm(H)	erm_SHROVE	erm(H)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(H)
+erm(K)	erm-23S_rRNA	erm(K)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(K)
+erm(N)	erm-23S_rRNA	erm(N)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(N)
+erm(O)	erm_SHROVE	erm(O)	NF000087.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(O)
+erm(Q)	erm-23S_rRNA	erm(Q)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Q)
+erm(R)	erm_SHROVE	erm(R)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(R)
+erm(S)	erm_SHROVE	erm(S)	NF000024.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(S)
+erm(T)	erm-23S_rRNA	erm(T)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)
+erm(U)	erm-23S_rRNA	erm(U)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(U)
+erm(V)	erm_SHROVE	erm(V)	NF000047.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(V)
+erm(W)	erm-23S_rRNA	erm(W)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(W)
+erm(X)	erm-23S_rRNA	erm(X)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)
+erm(Y)	erm-23S_rRNA	erm(Y)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Y)
+erm(Z)	erm-23S_rRNA	erm(Z)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Z)
+erm-23S_rRNA	erm_gen	erm	NF000499.1	215.00	215.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S ribosomal RNA methyltransferase Erm
+erm_SHROVE	erm-23S_rRNA	erm	NF000337.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ErmE/ErmH/ErmO/ErmR family 23S rRNA (adenine(2058)-N(6))-methyltransferase
+erm_gen	AMR	erm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Erm family 23S rRNA (adenine(2058)-N(6))-methyltransferase
+espA	VIRULENCE_Ecoli	espA	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocon filament protein EspA
+espB	VIRULENCE_Ecoli	espB	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocon pore-forming subunit EspB
+espC	auto_tox	espC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin EspC
+espF	VIRULENCE_Ecoli	espF	-	0.00	0.00	75.00	90.00	90.00	80.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE effector EspF
+espI	auto_tox	espI	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EspI
+espJ_gen	VIRULENCE_Ecoli	espJ	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			EspJ family T3SS effector ADP-ribosyltransferase
+espJ	espJ_gen	espJ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector ADP-ribosyltransferase EspJ
+espK	VIRULENCE_Ecoli	espK	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector EspK
+espP	auto_tox	espP	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter EspP
+espX1	VIRULENCE_Ecoli	espX1	-	0.00	0.00	84.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector EspX1
+estDL136	AMR	estDL136	NF033149.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol hydrolase
+estX	AMR	estX	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			alpha/beta fold putative hydrolase EstX
+eta	VIRULENCE_Saur	eta	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			exfoliative toxin A
+etb	VIRULENCE_Saur	etb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			exfoliative toxin B
+etpD	VIRULENCE_Ecoli	etpD	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			variant type II secretion system secretin EtpD
+etx	VIRULENCE_Cperf	etx	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			epsilon toxin type B
+f17a	VIRULENCE_Ecoli	f17a	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F17A fimbrial adhesin
+f17g	VIRULENCE_Ecoli	f17g	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F17G fimbrial adhesin
+faeG	VIRULENCE_Ecoli	faeG	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F4 (K88) fimbria major subunit/adhesin FaeG
+farB	AMR	farB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	fatty acid resistance MFS efflux transporter permease subunit FarB
+fasA	VIRULENCE_Ecoli	fasA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F6 fimbrial major subunit FasA
+fdeC	VIRULENCE_Ecoli	fdeC	-	0.00	0.00	88.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			intimin-like adhesin FdeC
+fedA	VIRULENCE_Ecoli	fedA	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F18 fimbrial major subunit FedA
+fedF	VIRULENCE_Ecoli	fedF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F18 fimbrial adhesin subunit FedF
+fexA	MFS_efflux_CHL	fexA	NF000218.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FexA
+fieF	CDF_efflux	fieF	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	METAL			CDF family cation-efflux transporter FieF
+fim41a	VIRULENCE_Ecoli	fim41a	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			fimbrial adhesin F41 protein Fim41a
+floR2	floR	floR2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FloR2
+floR	cmlA_floR	floR	NF000219.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	chloramphenicol/florfenicol efflux MFS transporter FloR
+focG	VIRULENCE_Ecoli	focG	-	0.00	0.00	97.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			F1C fimbria minor subunit FocG
+fomA	AMR	fomA	NF000338.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance kinase FomA
+fomB	AMR	fomB	NF000361.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FomB family phosphonate monophosphate kinase
+fos-Crono	fos_GT	fos	NF000339.2	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fos-Vibrio	fos_GT	fos	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosG/FosC2-related fosfomycin resistance glutathione transferase
+fosA5_fam	fosA_gen	fosA	NF040540.1	310.00	310.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA5 family fosfomycin resistance glutathione transferase
+fosA7_fam	fosA_gen	fosA7	NF032892.0	305.00	305.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA7 family fosfomycin resistance glutathione transferase
+fosA8_fam	fosA_gen	fosA8	NF033933.0	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA8 family fosfomycin resistance glutathione transferase
+fosA_PA1129	fos_GT	fosA	NF000094.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fosA_gen	fos_GT	fosA	NF000221.4	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA family fosfomycin resistance glutathione transferase
+fosB-Bcer	fosB_gen	fosB	NF000098.1	295.00	295.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB family fosfomycin resistance bacillithiol transferase
+fosB-Saur	fosB_gen	fosB	NF000085.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase
+fosB-Sepi	fosB_gen	fosB	NF000063.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB family fosfomycin resistance bacillithiol transferase
+fosB_gen	fos_gen	fosB	NF000493.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosB/FosD family fosfomycin resistance bacillithiol transferase
+fosC2	fos_GT	fosC2	NF000074.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosC2 family fosfomycin resistance glutathione transferase
+fosC	AMR	fosC	NF000122.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance kinase FosC
+fosD	fosB_gen	fosD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance bacillithiol transferase FosD
+fosE	fosX_gen	fosE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosE
+fosF	fos_GT	fosF	NF000494.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosF
+fosG	fos_GT	fosG	NF000467.1	240.00	240.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosG family fosfomycin resistance glutathione transferase
+fosI	fosX_gen	fosI	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosI
+fosK	fos_GT	fosK	NF000495.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosK
+fosL	fos_GT	fosL	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase FosL
+fosM1	fosM	fosM1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM1
+fosM2	fosM	fosM2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM2
+fosM3	fosM	fosM3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance protein FosM3
+fosM	fos_gen	fosM	NF038306.1	255.00	255.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosM family fosfomycin resistance protein
+fosU	fos_GT	fosU	NF038311.1	295.00	295.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosU family fosfomycin resistance glutathione transferase
+fosX_gen	fos_gen	fosX	NF000222.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosX/FosE/FosI family fosfomycin resistance hydrolase
+fosX	fosX_gen	fosX	-	0.00	0.00	84.00	90.00	90.00	90.00	90.00	35.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance hydrolase FosX
+fos_A3_A4	fosA_gen	fosA	NF000075.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA3/FosA4 family fosfomycin resistance glutathione transferase
+fos_A_A2	fosA_gen	fosA	NF000026.1	275.00	275.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	FosA/FosA2 family fosfomycin resistance glutathione transferase
+fos_GT	fos_gen	fos	NF000496.1	190.00	190.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin resistance glutathione transferase
+fos_gen	AMR	fos	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	fosfomycin inactivation enzyme
+fos_related	fos_gen	fos	NF000125.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	Fos family putative thiol transferase
+fusBCD_gen	AMR	fus	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusB/FusC/FusD family EF-G-binding protein
+fusB_set	fusBCD_gen	fusB	NF000340.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusB family fusidic acid resistance EF-G-binding protein
+fusB	fusB_set	fusB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid resistance EF-G-binding protein FusB
+fusC_set	fusBCD_gen	fusC	NF000341.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusC family fusidic acid resistance EF-G-binding protein
+fusD	fusBCD_gen	fusD	NF000460.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	FusD family fusidic acid resistance EF-G-binding protein
+fusF	fusBCD_gen	fusF	NF000503.1	435.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid resistance EF-G-binding protein FusF
+fusH	AMR	fusH	NF000157.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	fusidic acid esterase FusH
+gamma-1	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-2	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	THETA	intimin type theta
+gamma-3	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-4	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-5	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma-6	gamma	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+gamma	eae_typing_E._coli	eae	-	0.00	0.00	92.50	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	intimin type gamma
+garos_AAA	AMR	gar_fam	NF038208.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	garosamine-type aminoglycoside resistance ATP-binding protein
+gar	garos_AAA	gar	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	gentamicin resistance ATP-binding protein Gar
+golS	METAL	golS	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	STRESS	METAL	GOLD	GOLD	Au(I) sensor transcriptional regulator GolS
+golT	P-type_ATPase	golT	-	0.00	0.00	92.00	90.00	90.00	92.00	90.00	25.00	1	STRESS	METAL	COPPER/GOLD	COPPER/GOLD	gold/copper-translocating P-type ATPase GolT
+grdA	garos_AAA	grdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	gentamicin resistance ATP-binding protein GrdA
+grm	rmt	grm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	Grm family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+hbp_auto	auto_tox	-	-	0	0	94.00	90.00	90.00	96.00	90.00	25.00	0	VIRULENCE	VIRULENCE			hemoglobin-binding protease autotransporter Hbp
+hld	VIRULENCE_Saur	hld	-	0.00	0.00	91.00	90.00	90.00	91.00	90.00	90.00	1	VIRULENCE	VIRULENCE			delta-hemolysin
+hlgA	VIRULENCE_Saur	hlgA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgAB subunit A
+hlgB	VIRULENCE_Saur	hlgB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgAB/HlgCB subunit B
+hlgC	VIRULENCE_Saur	hlgC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component gamma-hemolysin HlgCB subunit C
+hlyA-alpha	VIRULENCE_Ecoli	hlyA-alpha	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			RTX toxin hemolysin HlyA
+hlyE	VIRULENCE_Ecoli	hlyE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			hemolysin HlyE
+hmrM	MATE_efflux	hmrM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	sodium-coupled multidrug efflux MATE transporter HmrM
+hugA	bla-A	hugA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	class A beta-lactamase
+iap	VIRULENCE_Cperf	iap	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin iota enzymatic subunit Ia
+ibeA	VIRULENCE_Ecoli	ibeA	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			putative intracellular survival FAD-dependent oxidoreductase IbeA
+ibp	VIRULENCE_Cperf	ibp	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ADP-ribosylating binary toxin iota binding subunit Ib
+icaC	VIRULENCE_Saur	icaC	-	0.00	0.00	50.00	90.00	90.00	75.00	90.00	40.00	1	VIRULENCE	VIRULENCE			polysaccharide intercellular adhesin biosynthesis/export protein IcaC
+icr-Mo	pmrC_gen	icr-Mo	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	COLISTIN	COLISTIN	phosphoethanolamine--lipid A transferase ICR-Mo
+iha	OM_sidero	iha	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bifunctional siderophore receptor/adhesin Iha
+iota-1	iota	eae	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	IOTA	intimin type iota
+iota	eae_typing_E._coli	eae	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	IOTA	intimin type iota
+ipaD	VIRULENCE_Ecoli	ipaD	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system needle tip complex protein IpaD
+ipaH1	ipa_gen	ipaH1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH1/H6
+ipaH2	ipa_gen	ipaH2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH2
+ipaH3	ipa_gen	ipaH3	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH3
+ipaH4	ipa_gen	ipaH4	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH4/H7
+ipaH5	ipa_gen	ipaH5	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH5
+ipaH9.8	ipa_gen	ipaH9.8	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase IpaH9.8
+ipa_gen	VIRULENCE_Ecoli	ipa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			T3SS effector E3 ubiquitin-protein ligase
+ireA	OM_sidero	ireA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			TonB-dependent siderophore receptor IreA
+iri	rox_gen	iri	NF000343.1	950.00	950.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase Iri
+iroB	VIRULENCE	iroB	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	1	VIRULENCE	VIRULENCE			salmochelin biosynthesis C-glycosyltransferase IroB
+iroC	VIRULENCE	iroC	-	0.00	0.00	75.00	90.00	90.00	82.00	90.00	25.00	1	VIRULENCE	VIRULENCE			salmochelin/enterobactin export ABC transporter IroC
+iroD	VIRULENCE	iroD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catecholate siderophore esterase IroD
+iroE	VIRULENCE_Ecoli	iroE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catecholate siderophore esterase IroE
+iroN	OM_sidero	iroN	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			siderophore salmochelin receptor IroN
+iss	VIRULENCE_Ecoli	iss	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			increased serum survival lipoprotein Iss
+iucA	VIRULENCE_Ecoli	iucA	-	0.00	0.00	73.00	80.00	90.00	83.00	90.00	25.00	1	VIRULENCE	VIRULENCE			aerobactin synthase IucA
+iucB	VIRULENCE	iucB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			N(6)-hydroxylysine O-acetyltransferase IucB
+iucC	VIRULENCE	iucC	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			NIS family aerobactin synthetase IucC
+iucD	VIRULENCE	iucD	-	0.00	0.00	82.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			NADPH-dependent L-lysine N(6)-monooxygenase IucD
+iutA	VIRULENCE_Ecoli	iutA	-	0.00	0.00	77.00	80.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			ferric aerobactin receptor IutA
+kamB	npmA_gen	kamB	NF000363.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase KamB
+katP	VIRULENCE_Ecoli	katP	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			catalase/peroxidase KatP
+kdeA	MFS_efflux	kdeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter KdeA
+klaB	METAL	klaB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance system protein klaB
+klaC	METAL	klaC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance system protein klaC
+lambda-2	lambda	eae	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	70.00	1	VIRULENCE	VIRULENCE	INTIMIN	LAMBDA	intimin type lambda
+lambda	eae_typing_E._coli	eae	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	70.00	1	VIRULENCE	VIRULENCE	INTIMIN	LAMBDA	intimin type lambda
+lin	abc-f	lin	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lmo0919 family lincomycin resistance ABC-F type ribosomal protection protein
+lmrC_abcf	abc-f	lmrC	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ABC-F type ribosomal protection protein LmrC
+lmrS	BIOCIDE	lmrS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	multidrug efflux MFS transporter LmrS
+lngA	pilus	lngA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type IV pilus longus major pilin
+lnu(A)	lnu_AE	lnu(A)	NF000236.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(A)
+lnu(AN2)	lnu_AE	lnu(AN2)	NF000153.1	340.00	340.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(AN2)
+lnu(B)	lnu_BFG	lnu(B)	NF000235.3	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(B)
+lnu(C)	lnu_CDP	lnu(C)	NF000141.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(C)
+lnu(D)	lnu_CDP	lnu(D)	NF000017.1	325.00	325.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(D)
+lnu(E)	lnu_AE	lnu(E)	NF000478.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(E)
+lnu(F)	lnu_BFG	lnu(F)	NF000119.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(F)
+lnu(G)	lnu_BFG	lnu(G)	NF033182.0	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(G)
+lnu(P)	lnu_CDP	lnu(P)	NF000061.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase Lnu(P)
+lnu_AE	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase
+lnu_BFG	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Lnu(B)/Lnu(F)/Lnu(G) family lincosamide nucleotidyltransferase
+lnu_CDP	lnu	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Lnu(C)/Lnu(D)/Lnu(P) family lincosamide nucleotidyltransferase
+lnu	AMR	lnu	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	lincosamide nucleotidyltransferase
+lpfA-O113	lpfA_gen	lpfA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA-O113
+lpfA1	lpfA_gen	lpfA1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA1
+lpfA2	lpfA_gen	lpfA2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA2
+lpfA_gen	VIRULENCE_Ecoli	lpfA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			long polar fimbria major subunit LpfA
+lsa(A)	lsa	lsa(A)	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(A)
+lsa(B)	lsa	lsa(B)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(B)
+lsa(C)	lsa	lsa(C)	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(C)
+lsa(D)	lsa	lsa(D)	-	0.00	0.00	83.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(D)
+lsa(E)	lsa	lsa(E)	-	0.00	0.00	90.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Lsa(E)
+lsa	abc-f	lsa	NF000167.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	Lsa family ABC-F type ribosomal protection protein
+ltcA	VIRULENCE_Ecoli	ltcA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-labile enterotoxin LT subunit A
+lukD	VIRULENCE_Saur	lukD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component leukocidin LukED subunit D
+lukE	VIRULENCE_Saur	lukE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			bi-component leukocidin LukED subunit E
+lukF-PV	VIRULENCE_Saur	lukF-PV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Panton-Valentine bi-component leukocidin subunit F
+lukS-PV	VIRULENCE_Saur	lukS-PV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Panton-Valentine bi-component leukocidin subunit S
+macro_glyco	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	MACROLIDE	MACROLIDE	macrolide glycosyltransferase
+mchB	VIRULENCE_Ecoli	mchB	-	0.00	0.00	99.00	90.00	95.00	99.00	95.00	40.00	1	VIRULENCE	VIRULENCE			microcin H47
+mchF	VIRULENCE_Ecoli	mchF	-	0.00	0.00	96.00	90.00	90.00	97.00	90.00	25.00	1	VIRULENCE	VIRULENCE			microcin H47 export transporter peptidase/ATP-binding subunit MchF
+mco	multi_Cu_ox	mco	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	multi-copper oxidase Mco
+mcr-10	pmrC_gen	mcr-10	NF033862.2	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-10 family phosphoethanolamine--lipid A transferase
+mcr-1	pmrC_gen	mcr-1	NF000465.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-1 family phosphoethanolamine--lipid A transferase
+mcr-2	pmrC_gen	mcr-2	NF012159.0	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-2 family phosphoethanolamine--lipid A transferase
+mcr-3_set	pmrC_gen	mcr-3	NF033409.0	1075.00	1075.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-3 family phosphoethanolamine--lipid A transferase
+mcr-3	mcr-3_set	mcr-3	NF033408.5	1225.00	1225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-3 family phosphoethanolamine--lipid A transferase
+mcr-4	pmrC_gen	mcr-4	NF033462.1	1225.00	1225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-4 family phosphoethanolamine--lipid A transferase
+mcr-5	pmrC_gen	mcr-5	NF033463.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-5 family phosphoethanolamine--lipid A transferase
+mcr-6	pmrC_gen	mcr-6	NF033670.1	1235.00	1235.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-6 family phosphoethanolamine--lipid A transferase
+mcr-7	pmrC_gen	mcr-7	NF033671.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-7 family phosphoethanolamine--lipid A transferase
+mcr-8	pmrC_gen	mcr-8	NF033669.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	COLISTIN	COLISTIN	MCR-8 family phosphoethanolamine--lipid A transferase
+mcr-9	pmrC_gen	mcr-9	NF033836.1	1240.00	1240.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	COLISTIN	COLISTIN	MCR-9 family phosphoethanolamine--lipid A transferase
+mdsA	RND-peri	mdsA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MdsA
+mdsB	RND-IM	mdsB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit MdsB
+mdtM	MFS_efflux	mdtM	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter MdtM
+mecA-ceftar	mecA	mecA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	ceftaroline-resistant PBP2a family peptidoglycan transpeptidase MecA
+mecA1	mec_gen	mecA1	NF000410.1	1480.00	1480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA1
+mecA2	mec_gen	mecA2	NF000408.1	1525.00	1525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA2
+mecA	mec_gen	mecA	NF000409.1	1490.00	1490.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
+mecB	mec_gen	mecB	NF000406.1	1450.00	1450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecB
+mecC2	mec_gen	mecC2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC2
+mecC3	mec_gen	mecC3	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC3
+mecC	mec_gen	mecC	NF000407.1	1500.00	1500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC
+mecD	mec_gen	mecD	NF033378.1	1450.00	1450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecD
+mecI_of_mecA	mecI	mecI	NF000243.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	mecA-type methicillin resistance repressor MecI
+mecI_of_mecC	mecI	mecI	NF000244.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	mecC-type methicillin resistance repressor MecI
+mecI	blaI_gen	mecI	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	methicillin resistance repressor MecI
+mecR1	blaR1_gen	mecR1	NF033109.1	1200.00	1200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	beta-lactam sensor/signal transducer MecR1
+mec_gen	AMR	mec	NF000237.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	METHICILLIN	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase
+mef(A)	mef_gen	mef(A)	NF000245.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	macrolide efflux MFS transporter Mef(A)
+mef(B)	mef_gen	mef(B)	NF000051.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(B)
+mef(C)	mef_gen	mef(C)	NF000246.1	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(C)
+mef(D)	mef_gen	mef(D)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	35.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	macrolide efflux MFS transporter Mef(D)
+mef(En2)	mef_gen	mef(En2)	NF000154.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(En2)
+mef(F)	mef_gen	mef(F)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide efflux MFS transporter Mef(F)
+mef_gen	MFS_efflux	mef	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mef family macrolide efflux MFS transporter
+mepA	MATE_efflux	mepA	NF000131.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MATE transporter MepA
+merA	METAL	merA	TIGR02053.1	454.45	454.45	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury(II) reductase
+merB1	merB	merB1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial lyase MerB1
+merB_gen	METAL	merB	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			organomercurial lyase MerB
+merB	merB_gen	merB	NF033555.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial lyase MerB
+merC	METAL	merC	NF033784.1	140.00	140.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	ORGANOMERCURY	organomercurial transporter MerC
+merD	METAL	merD	NF033783.1	170.00	170.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance co-regulator MerD
+merE	METAL	merE	NF010310.2	80.00	80.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	broad-spectrum mercury transporter MerE
+merF	METAL	merF	NF033565.0	50.00	50.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system transport protein MerF
+merG	METAL	merG	NF033786.1	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	PHENYLMERCURY	phenylmercury resistance protein MerG
+merP	METAL	merP	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance system substrate-binding protein MerP
+merR_Bc1	merR_gen	merR1	-	0.00	0.00	82.00	90.00	90.00	88.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR1
+merR_Bc2	merR_gen	merR2	-	0.00	0.00	76.00	90.00	90.00	85.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR2
+merR_Ps	merR_gen	merR	NF010315.0	261.00	261.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR
+merR_gen	METAL	merR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercury resistance transcriptional regulator MerR
+merT_RC607	merT_gen	merT	NF033560.1	130.00	130.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+merT_gen	METAL	merT	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			mercury resistance system transport protein MerT
+merT_pI258	merT_gen	merT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+merT	merT_gen	merT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	MERCURY	MERCURY	mercuric transport protein MerT
+met_repress	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			metal-sensing transcriptional repressor
+mexA	RND-peri	mexA	NF033834.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MexA
+mexE	RND-peri	mexE	NF000249.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	MexE family multidrug efflux RND transporter periplasmic adaptor subunit
+mexX_amrA	RND-peri	mexX	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			MexX/AmrA family multidrug efflux RND transporter periplasmic adaptor subunit
+mexX	mexX_amrA	mexX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MexX
+mgt	macro_glyco	mgt	NF033129.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide-inactivating glycosyltransferase
+mph(A)	mph_gen	mph(A)	NF000254.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(A) family macrolide 2'-phosphotransferase
+mph(B)	mph_gen	mph(B)	NF000242.2	615.00	615.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(B) family macrolide 2'-phosphotransferase
+mph(C)	mph_gen	mph(C)	NF000240.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(C) family macrolide 2'-phosphotransferase
+mph(E)	mph_3	mph(E)	NF012158.1	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(E) family macrolide 2'-phosphotransferase
+mph(F)	mph_gen	mph(F)	NF000255.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(F) family macrolide 2'-phosphotransferase
+mph(G)	mph_3	mph(G)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(G) family macrolide 2'-phosphotransferase
+mphH	mph_gen	mphH	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphH
+mphJ	mph_gen	mphJ	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN/TELITHROMYCIN/TYLOSIN	macrolide 2'-phosphotransferase MphJ
+mphK	mph_gen	mphK	-	0.00	0.00	80.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphK
+mphL	mph_gen	mphL	NF038057.1	612.00	612.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphL
+mphM	mph_gen	mphM	NF038056.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphM
+mphN	mph_gen	mphN	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide 2'-phosphotransferase MphN
+mph_3	mph_gen	mph	NF000241.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Mph(E)/Mph(G) family macrolide 2'-phosphotransferase
+mph_gen	AMR	mph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	macrolide phosphotransferase
+mrdH	rcnA_gen	mrdH	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	Ni(II)/Co(II) efflux transporter permease subunit MrdH
+mreA	met_repress	mreA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL			metal-sensing transcriptional repressor MreA
+msr(A)	msr	msr(A)	NF000256.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(A)
+msr(C)	msr	msr(C)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(C)
+msr(D)	msr	msr(D)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	ERYTHROMYCIN	ABC-F type ribosomal protection protein Msr(D)
+msr(E)	msr	msr(E)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(E)
+msr(F)	msr	msrF	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(F)
+msr(G)	msr	msr(G)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(G)
+msr(H)	msr	msrH	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Msr(H)
+msr	abc-f	msr	NF000168.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	Msr family ABC-F type ribosomal protection protein
+mtrA_Ngon	efflux_TF	mtrA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	efflux transporter MtrCDE transcriptional activator MtrA
+mtrC	RND-peri	mtrC	-	0.00	0.00	88.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit MtrC
+mtrF	BIOCIDE	mtrF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	AbgT family antimetabolite efflux transporter MtrF
+mtrR	EFFLUX	mtrR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux system transcriptional repressor MtrR
+multi_CopA	multi_Cu_ox	copA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER	COPPER	laccase-like oxidase CopA
+multi_Cu_ox	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			multi-copper oxidase
+mupA	AMR	mupA	NF000257.1	1900.00	1900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MUPIROCIN	MUPIROCIN	mupirocin-resistant isoleucine--tRNA ligase MupA
+mupB	AMR	mupB	NF000258.1	1900.00	1900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MUPIROCIN	MUPIROCIN	mupirocin-resistant isoleucine--tRNA ligase MupB
+myrA	rlmA(II)_gen	myrA	NF000476.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase MyrA
+nccH	METAL	nccH	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	STRESS	METAL	CADMIUM/COBALT/NICKEL	CADMIUM/COBALT/NICKEL	nickel/cobalt/cadmium resistance ECF sigma factor NccH
+nccX	PERI-SENSOR	nccX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	CADMIUM/COBALT/NICKEL	CADMIUM/COBALT/NICKEL	periplasmic metal sensor NccX
+ncrA	METAL	ncrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	Metal Resistance
+ncrB	met_repress	ncrB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	nickel-sensing transcriptional repressor NcrB
+ncrC	rcnA_gen	ncrC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	Ni(II)/Co(II) efflux transporter permease subunit NcrC
+ncrY	METAL	ncrY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance OB fold protein NcrY
+netB	VIRULENCE_Cperf	netB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			necrotizing enteritis toxin NetB
+netF	VIRULENCE_Cperf	netF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			necrotizing enteritis toxin NetF
+nfaE	VIRULENCE_Ecoli	nfaE	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Dr family non-fimbrial adhesin I chaperone NfaE
+nimABCDEF	AMR	nim	NF000261.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	NimABCDEF family nitroimidazole resistance protein
+nimA	nimABCDEF	nimA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimA
+nimB	nimABCDEF	nimB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimB
+nimC	nimABCDEF	nimC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimC
+nimD	nimABCDEF	nimD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimD
+nimE	nimABCDEF	nimE	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimE
+nimIJ	AMR	nimIJ	NF000262.1	270.00	270.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	NimIJ family nitroimidazole resistance protein
+nimI	nimIJ	nimI	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimI
+nimJ	nimIJ	nimJ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	nitroimidazole resistance protein NimJ
+nirA	METAL	nirA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance membrane nickel efflux protein NirA
+nirB	met_repress	nirB	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel-sensing transcriptional repressor NirB
+nirD	METAL	nirD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance OB fold protein NirD
+nleA	VIRULENCE_Ecoli	nleA	-	0.00	0.00	85.00	90.00	90.00	88.00	90.00	80.00	1	VIRULENCE	VIRULENCE			type III secretion system effector NleA
+nleB2	VIRULENCE_Ecoli	nleB2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector arginine glycosyltransferase NleB2
+nleB	VIRULENCE_Ecoli	nleB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector arginine glycosyltransferase NleB
+nleC	VIRULENCE_Ecoli	nleC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			type III secretion system effector zinc metalloprotease NleC
+norM	MATE_efflux	norM	NF000263.1	950.00	950.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	EFFLUX	EFFLUX	sodium-coupled multidrug efflux MATE transporter NorM
+npmA_gen	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase
+npmA	npmA_gen	npmA	NF000030.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	16S rRNA (adenine(1408)-N(1))-methyltransferase NpmA
+nreB	METAL	nreB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	NICKEL	NICKEL	nickel resistance MFS transporter NreB
+nshR_tsnR	AMR	nshR	NF000477.1	425.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	NshR/TsnR family 23S rRNA methyltransferase
+nshR	nshR_tsnR	nshR	NF000035.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	NshR family nosiheptide/thiostrepton resistance 23S rRNA methyltransferase
+ole(B)	abcf-produ	ole(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Ole(B)
+oleD	mgt	oleD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	oleandomycin glycosyltransferase OleD
+oleI	macro_glyco	oleI	NF000362.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	OleI family self-immunity macrolide glycosyltransferase
+optrA	abc-f	optrA	NF000514.1	1450.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/OXAZOLIDINONE	FLORFENICOL/OXAZOLIDINONE	ABC-F type ribosomal protection protein OptrA
+oqxA	RND-peri	oqxA	NF000272.1	875.00	875.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	multidrug efflux RND transporter periplasmic adaptor subunit OqxA
+oqxB	RND-IM	oqxB	NF000037.1	2200.00	2200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	multidrug efflux RND transporter permease subunit OqxB
+otr(A)	tet_rib_protect	otr(A)	NF000120.3	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Otr(A)
+otr(B)	tet_MFS_efflux	otr(B)	NF000095.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	oxytetracycline resistance efflux MFS transporter OtrB
+papA	VIRULENCE_Ecoli	papA	-	0.00	0.00	82.00	90.00	90.00	85.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria major subunit PapA
+papC	VIRULENCE_Ecoli	papC	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial usher protein PapC
+papE	VIRULENCE_Ecoli	papE	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial minor subunit PapE
+papF	VIRULENCE_Ecoli	papF	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial tip protein PapF
+papG-III	papG	papG-III	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-III
+papG-II	papG	papG-II	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-II
+papG-I	papG	papG-I	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin PapG-I
+papG	VIRULENCE_Ecoli	papG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			P fimbria tip G-adhesin
+papH	VIRULENCE_Ecoli	papH	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			P fimbrial minor subunit PapH
+pcoA	multi_Cu_ox	pcoA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	multicopper oxidase PcoA
+pcoB	METAL	pcoB	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-binding protein PcoB
+pcoC	copC	pcoC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance system metallochaperone PcoC
+pcoD	copD	pcoD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance inner membrane protein PcoD
+pcoE	METAL	pcoE	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance system metallochaperone PcoE
+pcoR	copR_gen	pcoR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper response regulator transcription factor PcoR
+pcoS	METAL	pcoS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper resistance membrane spanning protein PcoS
+penA-A_Burk	bla-A	penA	NF000320.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PenA family class A beta-lactamase
+penI_Bp	bla-A	penI	NF000321.2	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PenI family class A extended-spectrum beta-lactamase
+perA	VIRULENCE_Ecoli	perA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			BFP system transcriptional regulator PerA
+pet	auto_tox	pet	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Pet
+pexA	MFS_efflux	pexA	NF000072.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PHENICOL	PHENICOL	phenicol efflux MFS transporter PexA
+pfoA	VIRULENCE_Cperf	pfoA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			cholesterol-dependent cytolysin perfringolysin O
+pic_auto	auto_tox	pic	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Pic
+pilus	VIRULENCE_Ecoli	pil	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			type IV pilus protein
+pmrA	MFS_efflux	pmrA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	QUINOLONE	QUINOLONE	multidrug efflux MFS transporter PmrA
+pmrC_gen	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			phosphoethanolamine--lipid A transferase
+poxtA	abc-f	poxtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein PoxtA
+qacA	MFS_efflux_qac	qacA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux MFS transporter QacA
+qacB	MFS_efflux_qac	qacB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux MFS transporter QacB
+qacCGHJ	SMR_efflux	qac	NF000384.1	160.00	160.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacCGHJ group quaternary ammonium compound efflux SMR transporter
+qacC	qacCGHJ	qacC	NF000023.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacC
+qacE_gen	SMR_qac_int	qacE	NF000276.2	185.00	185.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacE
+qacE	qacE_gen	qacE	-	0.00	0.00	97.00	99.00	99.00	97.00	99.00	99.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacE
+qacF	qac_F_L	qacF	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacF
+qacG2	SMR_qac_int	qacG2	NF000278.1	220.00	220.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacG2
+qacG	qacCGHJ	qacG	NF000277.1	200.00	200.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacG
+qacH_Lis	SMR_efflux	qacH	-	0.00	0.00	80.00	90.00	90.00	80.00	90.00	25.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qacH	qacCGHJ	qacH	NF000279.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qacJ	qacCGHJ	qacJ	NF012170.0	210.00	210.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacJ
+qacK	SMR_qac_int	qacK	NF033136.1	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacK
+qacL	qac_F_L	qacL	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacL
+qacR	BIOCIDE	qacR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	multidrug-binding transcriptional regulator QacR
+qacZ	qacH	qacZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	quaternary ammonium compound efflux SMR transporter QacH
+qac_F_L	SMR_qac_int	qac	NF000067.2	205.00	205.00	0.00	0.00	0.00	0.00	0.00	0.00	2	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	QacF/QacL family quaternary ammonium compound efflux SMR transporter
+qepA	MFS_efflux	qepA	NF012169.0	1075.00	1075.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	fluoroquinolone efflux MFS transporter QepA
+qnrAS	qnr	qnrAS	NF012151.0	490.00	490.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrAS family quinolone resistance pentapeptide repeat protein
+qnrA	qnr	qnrA	NF000071.4	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrA family quinolone resistance pentapeptide repeat protein
+qnrB	qnr	qnrB	NF000420.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrB family quinolone resistance pentapeptide repeat protein
+qnrC	qnr	qnrC	NF012152.0	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrC family quinolone resistance pentapeptide repeat protein
+qnrD	qnr	qnrD	NF000139.2	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrD family quinolone resistance pentapeptide repeat protein
+qnrE	qnr	qnrE	NF033375.2	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrE family quinolone resistance pentapeptide repeat protein
+qnrS	qnr	qnrS	NF000056.3	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrS family quinolone resistance pentapeptide repeat protein
+qnrVC	qnr	qnrVC	NF000421.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	QUINOLONE	QUINOLONE	QnrVC family quinolone resistance pentapeptide repeat protein
+qnr	AMR	qnr	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR			Qnr family pentapeptide repeat protein
+ranA	EFFLUX	ranA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR			multidrug efflux ABC transporter ATP-binding subunit RanA
+ranB	EFFLUX	ranB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR			multidrug efflux ABC transporter permease subunit RanB
+rcnA_gen	METAL	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	STRESS	METAL			Ni(II)/Co(II) efflux transporter permease subunit
+rgt1438	rgt	rgt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	Rgt1438 family rifamycin-inactivating glycosyltransferase
+rgt	AMR	rgt	NF000354.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating glycosyltransferase Rgt
+rho-1	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rho-2	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	YPSILON	intimin type ypsilon
+rho-3	rho	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rho	eae_typing_E._coli	eae	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE	INTIMIN	RHO	intimin type rho
+rlmA(II)_gen	AMR	rlmA(II)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	23S rRNA (guanine(748)-N(1))-methyltransferase
+rmpA2	VIRULENCE	rmpA2	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpA2
+rmpA	VIRULENCE	rmpA	-	0.00	0.00	89.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpA
+rmpC	VIRULENCE	rmpC	-	0.00	0.00	88.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype regulator RmpC
+rmpD	VIRULENCE	rmpD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			mucoid phenotype synthesis protein RmpD
+rmtA	rmt	rmtA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtA family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtB	rmt	rmtB	NF033209.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtB family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtC	rmt	rmtC	NF000150.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtD	rmt	rmtD	NF000007.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtD family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtE	rmt	rmtE	NF000069.1	525.00	525.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtE family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtF	rmt	rmtF	NF000113.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtF family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtG	rmt	rmtG	NF000114.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtG family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmtH	rmt	rmtH	NF000116.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	RmtH family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rmt	AMR	rmt	NF000466.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	Rmt family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+rox_gen	AMR	rox	NF033145.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase
+rox	rox_gen	rox	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMPIN	rifampin monooxygenase Rox
+rpeA	auto_tox	rpeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter colonization factor RpeA
+rphC	rph_gen	rphC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase RphC
+rphD	rph_gen	rphD	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase RphD
+rph_gen	AMR	rph	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase
+rph	rph_gen	rph	NF000283.1	1700.00	1700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	RIFAMYCIN	RIFAMYCIN	rifamycin-inactivating phosphotransferase Rph
+saa	VIRULENCE_Ecoli	saa	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			autoagglutinating adhesin Saa
+sab	VIRULENCE_Ecoli	sab	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			autotransporter adhesin Sab
+sak	VIRULENCE_Saur	sak	-	0.00	0.00	90.00	50.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylokinase
+sal(A)	sal	sal(A)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	ABC-F type ribosomal protection protein Sal(A)
+sal	abc-f	sal	NF000169.1	1050.00	1050.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	Sal family ABC-F type ribosomal protection protein
+sat2_fam	sat	sat2	NF000358.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat2
+sat3	sat	sat3	NF000359.1	360.00	360.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat3
+sat4	sat	sat4	NF000360.1	380.00	380.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase Sat4
+satA_Bant	sat	satA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase SatA
+satA_Bsub	sat	satA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase SatA
+sat_auto	auto_tox	sat	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin Sat
+sat	AMR	sat	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase
+scn	VIRULENCE_Saur	scn	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			complement inhibitor SCIN-A
+sdeA	BIOCIDE	sdeA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit SdeA
+sdeB	RND-IM	sdeB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit SdeB
+sdeY	RND-IM	sdeY	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit SdeY
+sea	VIRULENCE_Saur	sea	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type A
+seb	VIRULENCE_Saur	seb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type B
+sec1	VIRULENCE_Saur	sec1	-	0.00	0.00	98.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C1
+sec2	VIRULENCE_Saur	sec2	-	0.00	0.00	98.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C2
+sec3	VIRULENCE_Saur	sec3	-	0.00	0.00	96.00	90.00	90.00	98.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type C3
+sed	VIRULENCE_Saur	sed	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type D
+see	VIRULENCE_Saur	see	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type E
+seh	VIRULENCE_Saur	seh	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type H
+sei	VIRULENCE_Saur	sei	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type I
+sej	VIRULENCE_Saur	sej	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type J
+sek	VIRULENCE_Saur	sek	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type K
+sel26	VIRULENCE_Saur	sel26	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 26
+sel27	VIRULENCE_Saur	sel27	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 27
+sel28	VIRULENCE_Saur	sel28	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 28
+sel30	VIRULENCE_Saur	sel30	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 30
+sel31	VIRULENCE_Saur	sel31	-	0.00	0.00	99.00	90.00	90.00	99.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 31
+sel32	VIRULENCE_Saur	sel32	-	0.00	0.00	97.00	90.00	90.00	97.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 32
+sel33	VIRULENCE_Saur	sel33	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type 33
+selV	VIRULENCE_Saur	selV	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type V
+selX	VIRULENCE_Saur	selX	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin-like toxin X
+selZ	VIRULENCE_Saur	selZ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Z
+sel	VIRULENCE_Saur	sel	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type L
+sem	VIRULENCE_Saur	sem	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type M
+senB	VIRULENCE_Ecoli	senB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			enterotoxin production-related protein TieB
+sen	VIRULENCE_Saur	sen	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type N
+seo	VIRULENCE_Saur	seo	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type O
+sepA	auto_tox	sepA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin SepA
+sep	VIRULENCE_Saur	sep	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type P
+sequest	AMR	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin binding protein
+seq	VIRULENCE_Saur	seq	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Q
+ser	VIRULENCE_Saur	ser	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type R
+ses	VIRULENCE_Saur	ses	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type S
+set	VIRULENCE_Saur	set	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type T
+seu	VIRULENCE_Saur	seu	-	0.00	0.00	91.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type U
+sey	VIRULENCE_Saur	sey	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			staphylococcal enterotoxin type Y
+sfaF	VIRULENCE_Ecoli	sfaF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			S/F1C fimbrial biogenesis usher protein SfaF/FocD
+sfaS	VIRULENCE_Ecoli	sfaS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			S-fimbrial adhesin minor subunit SfaS
+sgm	rmt	sgm	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	Sgm family 16S rRNA (guanine(1405)-N(7))-methyltransferase
+sigA	auto_tox	sigA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease autotransporter toxin SigA
+silA	METAL-RND-IM	silA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA
+silB	cusB_gen	silB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB
+silC	METAL	silC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
+silE	METAL	silE	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	METAL	SILVER	SILVER	silver-binding protein SilE
+silF	METAL	silF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF
+silP	P-type_ATPase	silP	-	0.00	0.00	84.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	SILVER	SILVER	Ag(+)-translocating P-type ATPase SilP
+silR	copR_gen	silR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver response regulator transcription factor SilR
+silS	METAL	silS	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	copper/silver sensor histidine kinase SilS
+sinH	VIRULENCE_Ecoli	sinH	NF033423.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			intimin-like inverse autotransporter SinH
+smdA	BIOCIDE	smdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
+smdB	BIOCIDE	smdB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
+smeF	RND-OM	smeF	-	0.00	0.00	84.00	90.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane subunit SmeF
+smfY	MFS_efflux	smfY	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux MFS transporter SmfY
+spd	ant(9)	spd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase Spd
+splA	VIRULENCE_Saur	splA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplA
+splB	VIRULENCE_Saur	splB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplB
+splE	VIRULENCE_Saur	splE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			serine protease SplE
+spw	ant(9)	spw	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ANT(9) family aminoglycoside nucleotidyltransferase Spw
+srm(B)	abcf-produ	srm(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Srm(B)
+srpA	RND-peri	srpA	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter periplasmic adaptor subunit SrpA
+srpB	RND-IM	srpB	-	0.00	0.00	89.00	90.00	90.00	93.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter permease subunit SrpB
+srpC	RND-OM	ttgI	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	solvent efflux RND transporter outer membrane subunit SrpC
+srpR	BIOCIDE	srpR	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	solvent efflux transporter antirepressor SrpR
+srpS	BIOCIDE	srpS	-	0.00	0.00	80.00	80.00	90.00	85.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	solvent efflux transporter transcriptional repressor SrpS
+sslE	VIRULENCE_Ecoli	sslE	NF037973.1	3000.00	3000.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			lipoprotein metalloprotease SslE
+ssmE	SMR_efflux	ssmE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	multidrug efflux SMR transporter SsmE
+sta1	VIRULENCE_Ecoli	sta1	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin ST-I group a
+sta	sat	sta	NF000487.1	420.00	420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	streptothricin N-acetyltransferase STAT
+stb	VIRULENCE_Ecoli	stb	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			heat-stable enterotoxin ST-II
+str	ant(6)	str	NF000062.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	streptomycin adenylyltransferase Str
+stxA1a	stxA1	stxA1a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1A	Shiga toxin Stx1a subunit A
+stxA1c	stxA1	stxA1c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1C	Shiga toxin Stx1c subunit A
+stxA1d	stxA1	stxA1d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1D	Shiga toxin Stx1d subunit A
+stxA1	stxA	stxA1	NF033658.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1	Shiga toxin Stx1 subunit A
+stxA2a	stxA2	stxA2a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2A	Shiga toxin Stx2a subunit A
+stxA2b	stxA2	stxA2b	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2B	Shiga toxin Stx2b subunit A
+stxA2c	stxA2	stxA2c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2C	Shiga toxin Stx2c subunit A
+stxA2d	stxA2	stxA2d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2D	Shiga toxin Stx2d subunit A
+stxA2e	stxA2	stxA2e	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2E	Shiga toxin Stx2e subunit A
+stxA2f	stxA2	stxA2f	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2F	Shiga toxin Stx2f subunit A
+stxA2g	stxA2	stxA2g	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2G	Shiga toxin Stx2g subunit A
+stxA2	stxA	stxA2	NF033661.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2	Shiga toxin Stx2 subunit A
+stxA	stx	stxA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin subunit A
+stxB1a	stxB1	stxB1a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1A	Shiga toxin Stx1a subunit B
+stxB1c	stxB1	stxB1c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1C	Shiga toxin Stx1c subunit B
+stxB1d	stxB1	stxB1d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1D	Shiga toxin Stx1d subunit B
+stxB1	stxB	stxB1	NF033659.0	175.00	175.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX1	STX1	Shiga toxin Stx1 subunit B
+stxB2a	stxB2	stxB2a	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2A	Shiga toxin Stx2a subunit B
+stxB2b	stxB2	stxB2b	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2B	Shiga toxin Stx2b subunit B
+stxB2c	stxB2	stxB2c	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2C	Shiga toxin Stx2c subunit B
+stxB2d	stxB2	stxB2d	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2D	Shiga toxin Stx2d subunit B
+stxB2e	stxB2	stxB2e	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2E	Shiga toxin Stx2e subunit B
+stxB2f	stxB2	stxB2f	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2F	Shiga toxin Stx2f subunit B
+stxB2g	stxB2	stxB2g	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2G	Shiga toxin Stx2g subunit B
+stxB2	stxB	stxB2	NF033660.0	165.00	165.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE	STX2	STX2	Shiga toxin Stx2 subunit B
+stxB	stx	stxB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin subunit B
+stx	VIRULENCE_Ecoli	stx	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			Shiga toxin
+subA	VIRULENCE_Ecoli	subA	-	0.00	0.00	90.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			subtilase AB5 cytotoxin subunit A
+subB	VIRULENCE_Ecoli	subB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			subtilase AB5 cytotoxin subunit B
+sul1	sul	sul1	NF000294.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul1
+sul2	sul	sul2	NF000295.1	575.00	575.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul2
+sul3	sul	sul3	NF000296.1	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul3
+sul4	sul	sul4	NF033502.0	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase Sul4
+sulR	AMR	sulR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	flavin reductase SulR
+sulX	AMR	sulX	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide monooxygenase SulX
+sul	AMR	sul	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	SULFONAMIDE	SULFONAMIDE	sulfonamide-resistant dihydropteroate synthase
+taeA	abc-f	taeA	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	PLEUROMUTILIN	TIAMULIN	ABC-F type ribosomal protection protein TaeA
+tbtA	RND-peri	tbtA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter periplasmic adaptor subunit TbtA
+tbtB	RND-IM	tbtB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TbtB
+tbtM	adeC-K-oprM	tbtM	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter outer membrane channel subunit TbtM
+tbtR	BIOCIDE	tbtR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	tribuytltin resistance regulator TbtR
+tccP2	VIRULENCE_Ecoli	tccP	-	0.00	0.00	94.00	80.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Tir-cytoskeleton coupling protein TccP2
+tccP	VIRULENCE_Ecoli	tccP	-	0.00	0.00	94.00	80.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			Tir-cytoskeleton coupling protein TccP
+tcdA	tcd_gen	tcdA	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TcdA
+tcdB	tcd_gen	tcdB	-	0.00	0.00	85.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TcdB
+tcdC	VIRULENCE_Cdiff	tcdC	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin anti-sigma factor TcdC
+tcdE	VIRULENCE_Cdiff	tcdE	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			holin-like glycosylating toxin export protein TcdE
+tcdR	VIRULENCE_Cdiff	tcdR	-	0.00	0.00	95.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin sigma factor TcdR
+tcd_gen	VIRULENCE_Cdiff	-	-	0	0	0.00	0.00	0.00	0.00	0.00	0.00	0	VIRULENCE	VIRULENCE			glycosylating toxin
+tcmA	MFS_efflux	tcmA	NF000025.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACENOMYCIN	TETRACENOMYCIN	tetracenomycin C efflux MFS transporter
+tcr3	tet_MFS_efflux	tcr3	NF000009.1	1000.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tcr3
+tcrB	P-type_ATPase	tcrB	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	COPPER	COPPER	copper-translocating P-type ATPase TcrB
+terB	METAL	terB	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerB
+terC	METAL	terC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerC
+terD	METAL	terD	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance membrane protein TerD
+terE	METAL	terE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance cAMP binding protein TerE
+terW	METAL	terW	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance protein TerW
+terZ	METAL	terZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	STRESS	METAL	TELLURIUM	TELLURIUM	tellurium resistance-associated protein TerZ
+tet(30)	tet_A_B_C_D	tet(30)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(30)
+tet(31)	tet_A_B_C_D	tet(31)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(31)
+tet(32)	tet(M-W-O-S)	tet(32)	-	0.00	0.00	91.00	90.00	90.00	96.00	90.00	75.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(32)
+tet(33)	tet_A_B_C_D	tet(33)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(33)
+tet(34)	tet	tet(34)	NF000014.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	oxytetracycline resistance phosphoribosyltransferase domain-containing protein Tet(34)
+tet(35)	tet	tet(35)	NF000013.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux Na+/H+ antiporter family transporter Tet(35)
+tet(36)	tet_rib_protect	tet(36)	-	0.00	0.00	90.00	90.00	90.00	92.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(36)
+tet(37)	tet	tet(37)	NF000059.1	225.00	225.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)
+tet(38)	tet_MFS_efflux	tet(38)	NF012176.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(38)
+tet(39)	tet_A_B_C_D	tet(39)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(39)
+tet(40)	tet_MFS_efflux	tet(40)	NF000049.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(40)
+tet(41)	tet_A_B_C_D	tet(41)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(41)
+tet(42)	tet_MFS_efflux	tet(42)	NF012177.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(42)
+tet(43)	tet_MFS_efflux	tet(43)	NF012180.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(43)
+tet(44)	tet(M-W-O-S)	tet(44)	-	0.00	0.00	93.00	90.00	90.00	94.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(44)
+tet(45)	tet_L_K_45	tet(45)	NF012184.0	975.00	975.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(45)
+tet(47)	tet_destruct	tet(47)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(47)
+tet(48)	tet_destruct	tet(48)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(48)
+tet(49)	tet_destruct	tet(49)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(49)
+tet(50)	tet_destruct	tet(50)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(50)
+tet(51)	tet_destruct	tet(51)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(51)
+tet(52)	tet_destruct	tet(52)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(52)
+tet(53)	tet_destruct	tet(53)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(53)
+tet(54)	tet_destruct	tet(54)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(54)
+tet(55)	tet_destruct	tet(55)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(55)
+tet(56)	tet_destruct	tet(56)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase Tet(56)
+tet(57)	tet_A_B_C_D	tet(57)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(57)
+tet(59)	tet_A_B_C_D	tet(59)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(59)
+tet(62)	tet_A_B_C_D	tet(62)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(62)
+tet(63)	tet_L_K_45	tet(63)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(63)
+tet(64)	tet_A_B_C_D	tet(64)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(64)
+tet(A)	tet_A_B_C_D	tet(A)	NF012193.0	840.00	840.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(A)
+tet(B)	tet_A_B_C_D	tet(B)	NF012190.1	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(B)
+tet(C)	tet_A_B_C_D	tet(C)	NF012191.0	850.00	850.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(C)
+tet(D)	tet_A_B_C_D	tet(D)	NF012186.0	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(D)
+tet(E)	tet_A_B_C_D	tet(E)	NF012187.0	820.00	820.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(E)
+tet(G)	tet_A_B_C_D	tet(G)	NF012192.0	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(G)
+tet(H)	tet(H-J)	tet(H)	NF012195.0	840.00	840.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(H)
+tet(H-J)	tet_A_B_C_D	tet(H-J)	NF012207.0	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(H)/Tet(J) family tetracycline efflux MFS transporter
+tet(J)	tet(H-J)	tet(J)	NF012194.0	870.00	870.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(J)
+tet(K)	tet_L_K_45	tet(K)	NF012183.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(K)
+tet(L)	tet_L_K_45	tet(L)	NF012185.0	925.00	925.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(L)
+tet(M)	tet(M-W-O-S)	tet(M)	NF012155.1	1420.00	1420.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(M)
+tet(M-W-O-S)	tet_rib_protect	tet_rib_protect	NF033148.1	1100.00	1100.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
+tet(O)	tet(M-W-O-S)	tet(O)	-	0.00	0.00	91.00	90.00	90.00	95.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(O)
+tet(O/32/O)	tet(M-W-O-S)	tet(O/32/O)	-	0.00	0.00	97.50	95.00	95.00	97.50	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/32/O)
+tet(O/M/O)	tet(M-W-O-S)	tet(O/M/O)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/M/O)
+tet(O/W)	tet(M-W-O-S)	tet(O/W)	-	0.00	0.00	99.00	98.00	98.00	99.00	98.00	98.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W)
+tet(O/W/32/O)	tet(M-W-O-S)	tet(O/W/32/O)	-	0.00	0.00	97.00	95.00	95.00	98.00	95.00	85.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/32/O)
+tet(O/W/O)	tet(M-W-O-S)	tet(O/W/O)	-	0.00	0.00	97.50	95.00	95.00	97.50	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/O)
+tet(Q)	tet_rib_protect	tet(Q)	NF012154.0	1425.00	1425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(Q)
+tet(S)	tet(M-W-O-S)	tet(S)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(S)
+tet(T)	tet_rib_protect	tet(T)	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(T)
+tet(V)	tet_MFS_efflux	tet(V)	NF012178.0	640.00	640.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(V)
+tet(W)	tet(M-W-O-S)	tet(W)	-	0.00	0.00	94.00	90.00	90.00	97.00	90.00	75.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein Tet(W)
+tet(W/32/O)	tet(M-W-O-S)	tet(W/32/O)	-	0.00	0.00	99.00	97.00	97.00	99.00	97.00	97.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(W/32/O)
+tet(W/N/W)	tet(M-W-O-S)	tet(W/N/W)	-	0.00	0.00	96.00	95.00	95.00	96.00	95.00	95.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection mosaic protein Tet(W/N/W)
+tet(X)	tet	tet(X)	NF033111.2	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X)
+tet(X1)	tet(X)	tet(X1)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X1)
+tet(X2)	tet(X)	tet(X2)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline-inactivating monooxygenase Tet(X2)
+tet(X3)	tet(X)	tet(X3)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X3)
+tet(X4)	tet(X)	tet(X4)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X4)
+tet(X5)	tet(X)	tet(X5)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	tetracycline-inactivating monooxygenase Tet(X5)
+tet(Y)	tet_A_B_C_D	tet(Y)	NF012188.1	820.00	820.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(Y)
+tet(Z)	tet_A_B_C_D	tet(Z)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter Tet(Z)
+tetA(46)	tet	tetA(46)	NF000474.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(46) subunit A
+tetA(58)	tet	tetA(58)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(58) subunit A
+tetA(60)	tet	tetA(60)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(60) subunit A
+tetA(D)	tet_A_B_C_D	tetA(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(D)-related tetracycline efflux MFS transporter
+tetA(P)	tet_MFS_efflux	tetA(P)	NF000043.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter TetA(P)
+tetAB_A	tetAB	tetA	NF000506.1	1025.00	1000.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB subunit A
+tetAB_B	tetAB	tetAB_B	NF000103.1	999.00	999.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB subunit B
+tetAB	tet	tetAB	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter TetAB
+tetB(46)	tet	tetB(46)	NF000475.1	1250.00	1250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(46) subunit B
+tetB(58)	tet	tetB(58)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(58) subunit B
+tetB(60)	tet	tetB(60)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux ABC transporter Tet(60) subunit B
+tetB(P)	tet_rib_protect	tetB(P)	-	0.00	0.00	90.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein TetB(P)
+tet_A_B_C_D	tet_MFS_efflux	tet	NF012174.0	475.00	475.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter
+tet_L_K_45	tet_MFS_efflux	tet	NF012175.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	Tet(L)/Tet(K)/Tet(45) family tetracycline efflux MFS transporter
+tet_MFS_efflux	MFS_efflux	tet	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline efflux MFS transporter
+tet_destruct	tet	tet	NF033476.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline destructase
+tet_rib_protect	tet	tet	NF012153.1	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance ribosomal protection protein
+tet	AMR	tet	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TETRACYCLINE	TETRACYCLINE	tetracycline resistance protein
+tir	VIRULENCE_Ecoli	tir	NF033637.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	1	VIRULENCE	VIRULENCE			type III secretion system LEE translocated intimin receptor Tir
+tlmB	blmB_tlmB	tlmB	NF000485.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	BLEOMYCIN	bleomycin family antibiotic N-acetyltransferase TlmB
+tlr(C)	abcf-produ	tlr(C)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	MACROLIDE	MACROLIDE	ABC-F type ribosomal protection protein Tlr(C)
+tmexC	RND-peri	tmexC	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux RND transporter periplasmic adaptor subunit TMexC
+tmexD	RND-IM	tmexD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux RND transporter permease subunit TMexD
+toprJ	RND-OM	toprJ	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	TETRACYCLINE	TIGECYCLINE	multidrug efflux transporter outer membrane subunit TOprJ
+toxB	VIRULENCE_Ecoli	toxB	-	0.00	0.00	85.00	90.00	90.00	90.00	90.00	25.00	1	VIRULENCE	VIRULENCE			toxin B
+tpeL	VIRULENCE_Cperf	tpeL	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			glycosylating toxin TpeL
+tsh	hbp_auto	tsh	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			temperature-sensitive protease autotransporter hemagglutinin Tsh
+tsnR	nshR_tsnR	tsnR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	THIOSTREPTON	THIOSTREPTON	23S rRNA (adenine(1067)-N)-methyltransferase TsnR
+tst	VIRULENCE_Saur	tst	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			toxic shock syndrome toxin TSST-1
+ttgA	RND-peri	ttgA	-	0.00	0.00	93.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	toluene efflux RND transporter periplasmic adaptor subunit TtgA
+ttgB	RND-IM	ttgB	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TtgB
+ttgD	RND-peri	ttgD	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	toluene efflux RND transporter periplasmic adaptor subunit TtgD
+ttgE	RND-IM	ttgE	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	EFFLUX	EFFLUX	multidrug efflux RND transporter permease subunit TtgE
+ttgR	BIOCIDE	ttgR	-	0.00	0.00	92.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	efflux transport transcriptional regulator TtgR
+ttgT	BIOCIDE	ttgT	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	STRESS	BIOCIDE	EFFLUX	EFFLUX	efflux transport transcriptional regulator TtgT
+tva(A)	abc-f	tva(A)	-	0.00	0.00	88.00	90.00	90.00	93.00	90.00	25.00	2	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN/STREPTOGRAMIN	ABC-F type ribosomal protection protein Tva(A)
+tva(B)	abc-f	tva(B)	-	0.00	0.00	92.00	90.00	90.00	94.00	90.00	25.00	2	AMR	AMR	PLEUROMUTILIN	PLEUROMUTILIN/STREPTOGRAMIN	ABC-F type ribosomal protection protein Tva(B)
+vac_auto	auto_tox	vactox	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			vacuolating autotransporter toxin Vat
+vanA-Ao2	vanA-all	vanA-Ao2	NF000092.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Ao2
+vanA-Pa	vanA-all	vanA-Pa	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pa
+vanA-Pt2	vanA-all	vanA-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pt2
+vanA-Pt	vanA-all	vanA-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Pt
+vanA-Sc	vanA-all	vanA-Sc	NF000129.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA-Sc
+vanA-all	AMR	vanA	NF000206.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase
+vanA	vanA-all	vanA	NF012217.1	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanA
+vanB	vanA-all	vanB	NF012216.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanB
+vanC-all	AMR	vanC	NF000207.3	520.00	520.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase
+vanC1	vanC	vanC	NF012213.0	775.00	775.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC1
+vanC2/3	vanC	vanC	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC2/3
+vanC	vanC-all	vanC	NF012214.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanC
+vanD	vanA-all	vanD	NF012215.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanD
+vanE	vanC-all	vanE	NF000036.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanE
+vanF	vanA-all	vanF	NF000144.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanF
+vanG-Cd	vanG	vanG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG-Cd
+vanG2	vanG	vanG	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG2
+vanG	AMR	vanG	NF000091.3	495.00	495.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanG
+vanH-Ac1	vanH-Amyco	vanH-Ac1	NF000151.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ac1
+vanH-Amyco	vanH	vanH	NF000112.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanH-AOV family D-lactate dehydrogenase
+vanH-Ao1	vanH-Amyco	vanH-Ao1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ao1
+vanH-Ao2	vanH-Amyco	vanH-Ao2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Ao2
+vanH-A	vanH_group_A_Pt	vanH-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-A
+vanH-B	vanH	vanH-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-B
+vanH-D	vanH	vanH-D	NF000004.1	550.00	550.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-D
+vanH-F	vanH	vanH-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-F
+vanH-M	vanH	vanH-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-M
+vanH-O	vanH	vanH-O	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-O
+vanH-Pt2	vanH_group_A_Pt	vanH-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Pt2
+vanH-Pt	vanH_group_A_Pt	vanH-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Pt
+vanH-Sc	vanH	vanH-Sc	NF000128.1	650.00	650.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH-Sc
+vanH_group_A_Pt	vanH	vanH	NF000371.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanH-A/VanH-Pt family D-lactate dehydrogenase
+vanH	AMR	vanH	NF000492.1	540.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-lactate dehydrogenase VanH
+vanI	vanA-all	vanI	NF000372.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanI
+vanJ	AMR	vanJ	NF000373.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	teicoplanin resistance protein VanJ
+vanK-I	vanK	vanK-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	peptidoglycan bridge formation peptidyltransferase VanK-I
+vanK-Sc	vanK	vanK-Sc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	peptidoglycan bridge formation peptidyltransferase VanK-Sc
+vanK	AMR	vanK	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanK family peptidoglycan bridge formation peptidyltransferase
+vanL	vanC-all	vanL	NF000032.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanL
+vanM	vanA-all	vanM	NF000470.1	760.00	760.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanM
+vanN	vanC-all	vanN	NF000093.1	700.00	700.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--D-serine ligase VanN
+vanO	vanA-all	vanO	NF000374.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-alanine--(R)-lactate ligase VanO
+vanR-ABDEGLN	vanR_gen	vanR	NF033117.2	350.00	350.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanR-ABDEGLN family response regulator transcription factor
+vanR-A	vanR-ABDEGLN	vanR-A	NF000401.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanA-type vancomycin resistance DNA-binding response regulator VanR
+vanR-B	vanR_gen	vanR-B	NF000402.1	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanB-type vancomycin resistance response regulator transcription factor VanR
+vanR-Cd	vanR-ABDEGLN	vanR-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-Cd-type vancomycin resistance DNA-binding response regulator VanR
+vanR-C	vanR-ABDEGLN	vanR-C	NF000403.1	480.00	480.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanC-type vancomycin resistance DNA-binding response regulator VanR
+vanR-D	vanR-ABDEGLN	vanR-D	NF000404.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanD-type vancomycin resistance DNA-binding response regulator VanR
+vanR-E	vanR-ABDEGLN	vanR-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanE-type vancomycin resistance DNA-binding response regulator VanR
+vanR-FM	vanR_gen	vanR	NF033120.0	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanR-FM family response regulator transcription factor
+vanR-F	vanR-FM	vanR-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanF-type vancomycin resistance DNA-binding response regulator VanR
+vanR-G	vanR-ABDEGLN	vanR-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-type vancomycin resistance DNA-binding response regulator VanR
+vanR-I	vanR-ABDEGLN	vanR-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanI-type vancomycin resistance DNA-binding response regulator VanR
+vanR-L	vanR-ABDEGLN	vanR-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanL-type vancomycin resistance DNA-binding response regulator VanR
+vanR-M	vanR-FM	vanR-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanM-type vancomycin resistance DNA-binding response regulator VanR
+vanR-N	vanR-ABDEGLN	vanR-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanN-type vancomycin resistance DNA-binding response regulator VanR
+vanR-O	vanR_gen	vanR-O	NF033118.1	505.00	505.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanO-type vancomycin resistance response regulator transcription factor VanR
+vanR-Sc	vanR_gen	vanR-Sc	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanSc-type vancomycin resistance response regulator transcription factor VanR
+vanR_gen	RESPONSE_REG	vanR	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance response regulator transcription factor VanR
+vanS-A	vanS_ACDEFG	vanS-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanA-type vancomycin resistance histidine kinase VanS
+vanS-B	vanS_gen	vanS-B	NF033090.1	920.00	920.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanB-type vancomycin resistance histidine kinase VanS
+vanS-Cd	vanS_ACDEFG	vanS-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-Cd-type vancomycin resistance histidine kinase VanS
+vanS-C	vanS_ACDEFG	vanS-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanC-type vancomycin resistance histidine kinase VanS
+vanS-D	vanS_ACDEFG	vanS-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanD-type vancomycin resistance histidine kinase VanS
+vanS-E	vanS_ACDEFG	vanS-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanE-type vancomycin resistance histidine kinase VanS
+vanS-F	vanS_ACDEFG	vanS-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanF-type vancomycin resistance histidine kinase VanS
+vanS-G	vanS_ACDEFG	vanS-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanG-type vancomycin resistance histidine kinase VanS
+vanS-L	vanS_ACDEFG	vanS-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanL-type vancomycin resistance histidine kinase VanS
+vanS-M	vanS_ACDEFG	vanS-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanM-type vancomycin resistance histidine kinase VanS
+vanS-N	vanS_ACDEFG	vanS-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanN-type vancomycin resistance histidine kinase VanS
+vanS-O	vanS_gen	vanS-O	NF033094.0	720.00	720.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanO-type vancomycin resistance histidine kinase VanS
+vanS-Pt2	vanS_ACDEFG	vanS-Pt2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanPt2-type vancomycin resistance histidine kinase VanS
+vanS-Pt	vanS_ACDEFG	vanS-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanPt-type vancomycin resistance histidine kinase VanS
+vanS-Sc	vanS_gen	vanS-Sc	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanSc-type vancomycin resistance histidine kinase VanS
+vanS_ACDEFG	vanS_gen	vanS	NF033091.0	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance histidine kinase VanS
+vanS_gen	AMR	vanS	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	vancomycin resistance histidine kinase VanS
+vanT-Cd	vanT-G_fam	vanT-Cd	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-Cd
+vanT-C	vanT_CELN	vanT-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-C
+vanT-E	vanT_CELN	vanT-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-E
+vanT-G_fam	vanT_all	vanT	NF033131.1	460.00	460.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanT-G-like membrane-bound serine racemase
+vanT-G	vanT-G_fam	vanT-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-G
+vanT-N	vanT_CELN	vanT-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT-N
+vanT_CELN	vanT_all	vanT	NF033132.1	900.00	900.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanT_all	AMR	vanT	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTc2	vanT_CELN	vanTc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTc3	vanT_CELN	vanTc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	membrane-bound serine racemase VanT
+vanTm-L	vanT_all	vanTm	NF000033.1	675.00	675.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	serine racemase VanT-L membrane subunit
+vanTr-L	vanT_all	vanTr	NF033133.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	serine racemase VanT-L catalytic subunit
+vanU-G	vanU	vanU-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance transcriptional regulator VanU-G
+vanU	AMR	vanU	NF000090.1	150.00	150.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance transcriptional regulator VanU
+vanW-B	vanW	vanW-B	NF033122.1	610.00	610.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-B
+vanW-G	vanW	vanW-G	NF033123.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-G
+vanW-I	vanW	vanW-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-I
+vanW-Pt	vanW	vanW-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW-Pt
+vanW	AMR	vanW	NF033128.2	365.00	365.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance accessory protein VanW
+vanX-Ac1	vanX	vanX-Ac1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ac1
+vanX-Ao1	vanX	vanX-Ao1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ao1
+vanX-Ao2	vanX	vanX-Ao2	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Ao2
+vanX-A	vanX	vanX-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-A
+vanX-B	vanX	vanX-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-B
+vanX-D	vanX	vanX-D	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-D
+vanX-F	vanX	vanX-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-F
+vanX-I	vanX	vanX-I	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-I
+vanX-M	vanX	vanX-M	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-M
+vanX-O	vanX	vanX-O	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-O
+vanX-Pt	vanX	vanX-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Pt
+vanX-Sc	vanX	vanX-Sc	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX-Sc
+vanXY-C	vanXY	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY-E	vanXY	vanXY-E	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-E
+vanXY-G2	vanXY-G_fam	vanXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G2
+vanXY-G_fam	vanXY	vanXY	NF000149.1	500.00	500.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G
+vanXY-G	vanXY-G_fam	vanXY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-G
+vanXY-L	vanXY	vanXY-L	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-L
+vanXY-N	vanXY	vanXY-N	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-N
+vanXY-c2/3	vanXY-C	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY-c4	vanXY-C	vanXY-C	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C
+vanXY	AMR	vanXY	NF000380.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D,D-carboxypeptidase/D,D-dipeptidase VanXY
+vanX	AMR	vanX	NF033115.1	320.00	320.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala dipeptidase VanX
+vanY-A	vanY_AFMPt	vanY-A	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-A
+vanY-B	vanY_BG	vanY-B	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-B
+vanY-D	AMR	vanY-D	NF000471.1	625.00	625.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	transpeptidase-like D-Ala-D-Ala carboxypeptidase VanY-D
+vanY-F	vanY_AFMPt	vanY-F	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-F
+vanY-G1	vanY_BG	vanY-G1	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-G1
+vanY-G	vanY_BG	vanY-G	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-G
+vanY-N	vanY	vanY-N	NF000086.1	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D,D-peptidase/D,D-carboxypeptidase VanY-N
+vanY-Pt	vanY_AFMPt	vanY-Pt	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY-Pt
+vanY_AFMPt	vanY	vanY	NF000472.1	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase
+vanY_BG	vanY	vanY	NF000473.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	VanY-B/VanY-G family D-Ala-D-Ala carboxypeptidase
+vanY	AMR	vanY	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	D-Ala-D-Ala carboxypeptidase VanY
+vanZ-A	vanZ	vanZ-A	NF033125.2	250.00	250.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-A
+vanZ-F	vanZ	vanZ-F	NF000145.1	375.00	375.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-F
+vanZ-Pt	vanZ	vanZ-Pt	NF000142.1	260.00	260.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ-Pt
+vanZ1	vanZ	vanZ1	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ1
+vanZ	AMR	vanZ	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	glycopeptide resistance protein VanZ
+varG	bla-B	varG	NF033574.1	750.00	750.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BETA-LACTAM	CARBAPENEM	VarG family subclass B1-like metallo-beta-lactamase
+vat(A)	vat	vat(A)	NF000101.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(A)
+vat(B)	vat	vat(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(B)
+vat(C)	vat	vat(C)	NF000097.1	425.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(C)
+vat(D)	vat	vat(D)	NF000111.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(D)
+vat(E)	vat	vat(E)	NF000020.1	450.00	450.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(E)
+vat(F)	vat	vat(F)	NF000147.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(F)
+vat(H)	vat	vat(H)	NF000504.1	475.00	425.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(H)
+vat(I)	vat	vatI	NF033468.1	415.00	415.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin A O-acetyltransferase Vat(I)
+vat	AMR	vat	NF000311.1	300.00	300.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	Vat family streptogramin A O-acetyltransferase
+vga(A)	vga	vga(A)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(A)
+vga(B)	vga	vga(B)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(B)
+vga(C)	vga	vga(C)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(C)
+vga(D)	vga	vga(D)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(D)
+vga(E)	vga	vga(E)	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ABC-F type ribosomal protection protein Vga(E)
+vga	abc-f	vga	NF000170.1	800.00	800.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	Vga family ABC-F type ribosomal protection protein
+vgb(A)	vgb	vgb(A)	NF000022.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(A)
+vgb(B)	vgb	vgb(B)	NF000096.1	600.00	600.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(B)
+vgb(C)	vgb	vgbC	-	0.00	0.00	84.00	90.00	90.00	88.00	90.00	25.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase Vgb(C)
+vgb	AMR	vgb	-	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	streptogramin B lyase
+virF	VIRULENCE_Ecoli	virF	-	0.00	0.00	94.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			AraC family invasion system transcriptional regulator VirF
+vmlR	abc-f	vmlR	-	0.00	0.00	90.00	90.00	90.00	96.00	90.00	25.00	2	AMR	AMR	MACROLIDE/PLEUROMUTILIN	LINCOSAMIDE/STREPTOGRAMIN/TIAMULIN	ABC-F type ribosomal protection protein VmlR
+vph	AMR	vph	NF000088.1	400.00	400.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	TUBERACTINOMYCIN	VIOMYCIN	viomycin phosphotransferase
+ybtP	VIRULENCE	ybtP	-	0.00	0.00	85.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			yersiniabactin ABC transporter ATP-binding/permease protein YbtP
+ybtQ	VIRULENCE	ybtQ	-	0.00	0.00	85.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			yersiniabactin ABC transporter ATP-binding/permease protein YbtQ
+yfeA	VIRULENCE	yfeA	-	0.00	0.00	83.00	90.00	90.00	88.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter substrate-binding protein YfeA
+yfeB	VIRULENCE	yfeB	-	0.00	0.00	86.00	90.00	90.00	96.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter ATP-binding protein YfeB
+yfeD	VIRULENCE	yfeD	-	0.00	0.00	88.00	90.00	90.00	92.00	90.00	25.00	1	VIRULENCE	VIRULENCE			iron/manganese ABC transporter permease subunit YfeD
+zbmA	ble	zbmA	NF000479.1	280.00	280.00	0.00	0.00	0.00	0.00	0.00	0.00	2	AMR	AMR	BLEOMYCIN	ZORBAMYCIN	zorbamycin binding protein ZbmA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/taxgroup.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/taxgroup.tab	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,2 @@
+#taxgroup	gpipe_taxgroup	number_of_nucl_ref_genes
+Acinetobacter_baumannii	Acinetobacter	0
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/version.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/amrfinderplus-db/2021-09-30.1/version.txt	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+2021-09-30.1
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/antifam.h3f
Binary file test-data/tmp/test-db/antifam.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/antifam.h3i
Binary file test-data/tmp/test-db/antifam.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/antifam.h3m
Binary file test-data/tmp/test-db/antifam.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/antifam.h3p
Binary file test-data/tmp/test-db/antifam.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/bakta.db
Binary file test-data/tmp/test-db/bakta.db has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/expert-protein-sequences.dmnd
Binary file test-data/tmp/test-db/expert-protein-sequences.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-genes.i1f
Binary file test-data/tmp/test-db/ncRNA-genes.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-genes.i1i
Binary file test-data/tmp/test-db/ncRNA-genes.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-genes.i1m
Binary file test-data/tmp/test-db/ncRNA-genes.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-genes.i1p
Binary file test-data/tmp/test-db/ncRNA-genes.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-regions.i1f
Binary file test-data/tmp/test-db/ncRNA-regions.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-regions.i1i
Binary file test-data/tmp/test-db/ncRNA-regions.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-regions.i1m
Binary file test-data/tmp/test-db/ncRNA-regions.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/ncRNA-regions.i1p
Binary file test-data/tmp/test-db/ncRNA-regions.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/oric.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/oric.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>ORI10010001
+TATTCTTCTATAACATTGTCAAGAATGATAGTTAAAATTCTCGAAATTGGGATATTAACTGCTTTGGAGTAATTTCTAACTTTTTGTCATACTCTTTGACTTGTATAGAAGTGTACACCTGTATCTAGTTTTTCTTGGCGTTCAACAGGAACTATTCCTGGTATTTTTGTTTTAGGTTGGGGAGGAATAGGCTGTGGTTGTGTGAATTGTTGTTGAAAATTTTGATTTTTTTGCTGTAAGAAACCATTATTATGATATTGAAAATTTTGTTCCTCTTGAAAATATCTCTCTTTTTTTGGTTTTCCAGAAAAATTTGATGAAAAAGATTTTTCTTCATTTCAATTTTCAAGATTATTTTCATTTTGTTGATTTATTTGCTCAGGCTGTTGAAATGAATTATTTTTTGATCAAAAAGATTTTGGAAAGGTTTTTTCAAAAGCAGATAAAGGTCCAAAATCAAATGAAGATGAATCTTTGTCAAAAGATGTTTCTTCTCTTTTTGACAAATTTTGTTTTTGATTAAACTTATTTTTATTTTGGGGTGTTACTTTTTCTTTTATGGAAAACAAATCTTCTTCTAAAAGACTTTGTTCTGGGTCATCATCTTGTGCTAAATCAAAGAAAAAACGTTTCTTTTTGTTA
+>ORI10010003
+GGCGTAGACACTGAATTCGATGGGGATAAGTGGTGGATAAAAGAATATAAATTAGTCATTACACTTTACTCACGAATATCCCCCTTTTTTTAGAGAAAAAATATACTTTCTTCACAAGCTTGTGTGCGGTTTTTGTTTGGTAATTCTCGAGACATAAGCACTTATCCAGATATTCACAGTTACTATTATGTGATACGACTACATTCTTTATACTTATAAGATTAATAAGGAGGAAACTAACT
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/orit.fna
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/orit.fna	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>CP019995|MOBP
+GTAGAATCGTTTAGTATGAGAATAGAAAACCAACGGTTTTCATGAACTTACTAAACGATTCTAC
+>CP012386|MOBP
+AGAACAATCAACAACTAATTAGGCAAATTAAGGGGTGCTAAACAACTGCTAGTAGGTGCTAGAGATGTGCTATAAAGGGTGCTAGTTTGGTGCTAGTTACTGCTAAATACGTGCTAGTTTAGGTGCTAGAAACGTGCTATATGGTGCTAAAAAGGTGCTAGTTTGCATGAAGTTACCTGCTAGCCAAGTGCTAGTGGCGTTCGTTTTTGGGTCCCACGGGAAAGCCTTGCACTGCAAGGCGGGTCAGCTTGTCTGACCCCCATTTCCCCTTATGCTCTTCCGAAACACAAAGCGCAATTAAGCGAATACTAGAGAATAAATA
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/pfam.h3f
Binary file test-data/tmp/test-db/pfam.h3f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/pfam.h3i
Binary file test-data/tmp/test-db/pfam.h3i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/pfam.h3m
Binary file test-data/tmp/test-db/pfam.h3m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/pfam.h3p
Binary file test-data/tmp/test-db/pfam.h3p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/psc.dmnd
Binary file test-data/tmp/test-db/psc.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/rRNA.i1f
Binary file test-data/tmp/test-db/rRNA.i1f has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/rRNA.i1i
Binary file test-data/tmp/test-db/rRNA.i1i has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/rRNA.i1m
Binary file test-data/tmp/test-db/rRNA.i1m has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/rRNA.i1p
Binary file test-data/tmp/test-db/rRNA.i1p has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/rfam-go.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/rfam-go.tsv	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,1 @@
+Rfam:RF00001	GO:0003735
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/sorf.dmnd
Binary file test-data/tmp/test-db/sorf.dmnd has changed
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test-db/version.json
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test-db/version.json	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,53 @@
+{
+  "date": "2021-08-9",
+  "major": 3,
+  "minor": 0,
+  "dependencies": [
+    {
+      "name": "AMRFinderPlus",
+      "release": "2020-09-22.2"
+    },
+    {
+      "name": "COG",
+      "release": "2014"
+    },
+    {
+      "name": "DoriC",
+      "release": "10"
+    },
+    {
+      "name": "ISFinder",
+      "release": "2019-09-25"
+    },
+    {
+      "name": "Mob-suite",
+      "release": "2.0"
+    },
+    {
+      "name": "Pfam",
+      "release": "33.1"
+    },
+    {
+      "name": "RefSeq",
+      "release": "r202"
+    },
+    {
+      "name": "Rfam",
+      "release": "14.2"
+    },
+    {
+      "name": "UniProtKB/Swiss-Prot",
+      "release": "2020_04"
+    }
+  ],
+  "experts": [
+    {
+      "name": "AMRFinderPlus",
+      "release": "3.10.1"
+    },
+    {
+      "name": "NCBI BlastRules",
+      "release": "4.0"
+    }
+  ]
+}
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/test_database.loc
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/test_database.loc	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,5 @@
+# Tab separated with 4 columns:
+# - value (Galaxy records this in the Galaxy DB)
+# - name (Galaxy shows this in the UI)
+# - path (folder name containing the NCBI DB)
+test-db-bakta	"Database test"	${__HERE__}/test-db
diff -r 000000000000 -r 1a27ad3d0cdf test-data/tmp/user-proteins.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmp/user-proteins.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>VFDB_test 90~~~90~~~90~~~yaxA~~~cytotoxin YaxA~~~VFDB:VFG045347,VFDB:VF0511,EC:1.1.1.1,EC:2.2.2.2
+MTQTQLAIDNVLASAENTIQLNELPKVVLDFITGEQTSVARSGGIFTKEDLINLKLYVRKGLSLPTRQDEVEAYLGYKKIDVAGLEPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINQMPITLRVKTLLRDITDKQLENITYESADHEVASALKDILDDMKGDINRHQTTTENVRKKVSDYRITLTGGELSSGDKVNGLEPQVKTKYDLMEKSNMRKSIKELDEKIKEKKQRIEQLKKDYDKFVGLSFTGAIGGIIAMAITSGIFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINNALRLTSFVNKFQQVITPWQSVGDSARQLVDIFDEAIKEYKKVYG
+>hypo-mock-test 99~~~99~~~99~~~mock1~~~mock hypothetical user protein 1~~~USERDB:MOCK1,EC:0.0.0.0
+MAQNPFKALNINIDKIESALTQNGVTNYSSNVKNERETHISGTYKGIDFLIKLMPSGGNTTIGRASGQNNTYFDEIALIIKENCLYSDTKNFEYTIPKFSDDDRANLFEFLSEEGITITEDNNNDPNCKHQYIMTTSNGDRVRAKIYKRGSIQFQGKYLQIASLINDFMCSILNMKEIVEQKNKEFNVDIKKETIESELHSKLPKSIDKIHEDIKKQLSCSLIMKKIDVEMEDYSTYCFSALRAIEGFIYQILNDVCNPSSSKNLGEYFTENKPKYIIREIHQETINGEIAEVLCECYTYWHENRHGLFHMKPGIADTKTINKLESIAIIDTVCQLIDGGVARLKL
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf test-data/user-proteins.faa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/user-proteins.faa	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,4 @@
+>VFDB_test 90~~~90~~~90~~~yaxA~~~cytotoxin YaxA~~~VFDB:VFG045347,VFDB:VF0511,EC:1.1.1.1,EC:2.2.2.2
+MTQTQLAIDNVLASAENTIQLNELPKVVLDFITGEQTSVARSGGIFTKEDLINLKLYVRKGLSLPTRQDEVEAYLGYKKIDVAGLEPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINQMPITLRVKTLLRDITDKQLENITYESADHEVASALKDILDDMKGDINRHQTTTENVRKKVSDYRITLTGGELSSGDKVNGLEPQVKTKYDLMEKSNMRKSIKELDEKIKEKKQRIEQLKKDYDKFVGLSFTGAIGGIIAMAITSGIFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINNALRLTSFVNKFQQVITPWQSVGDSARQLVDIFDEAIKEYKKVYG
+>hypo-mock-test 99~~~99~~~99~~~mock1~~~mock hypothetical user protein 1~~~USERDB:MOCK1,EC:0.0.0.0
+MAQNPFKALNINIDKIESALTQNGVTNYSSNVKNERETHISGTYKGIDFLIKLMPSGGNTTIGRASGQNNTYFDEIALIIKENCLYSDTKNFEYTIPKFSDDDRANLFEFLSEEGITITEDNNNDPNCKHQYIMTTSNGDRVRAKIYKRGSIQFQGKYLQIASLINDFMCSILNMKEIVEQKNKEFNVDIKKETIESELHSKLPKSIDKIHEDIKKQLSCSLIMKKIDVEMEDYSTYCFSALRAIEGFIYQILNDVCNPSSSKNLGEYFTENKPKYIIREIHQETINGEIAEVLCECYTYWHENRHGLFHMKPGIADTKTINKLESIAIIDTVCQLIDGGVARLKL
\ No newline at end of file
diff -r 000000000000 -r 1a27ad3d0cdf tool-data/bakta_database.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/bakta_database.loc.sample	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,3 @@
+#This is a sample file distributed with Galaxy that enables tools
+#file has this format (white space characters are TAB characters)
+test-db-bakta "Database test"	${__HERE__}/test-db
diff -r 000000000000 -r 1a27ad3d0cdf tool_data_table_conf.xml.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,7 @@
+<?xml version="1.0"?>
+<tables>
+    <table name="bakta_database" comment_char="#">
+        <columns>value, name, path</columns>
+        <file path="tool-data/bakta_database.loc.sample" />
+    </table>
+</tables>
diff -r 000000000000 -r 1a27ad3d0cdf tool_data_table_conf.xml.test
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.test	Thu Sep 01 17:28:43 2022 +0000
@@ -0,0 +1,7 @@
+<?xml version="1.0"?>
+<tables>
+    <table name="bakta_database" comment_char="#">
+        <columns>value, name, path</columns>
+        <file path="${__HERE__}/test-data/test_database.loc" />
+    </table>
+</tables>