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comparison bamtools_split_tag.xml @ 3:e9b9c489aacc draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/bamtools/bamtools_split commit 5ebe920838ab3c36e93d620c479df17f43f8e336
author iuc
date Fri, 15 Mar 2024 13:49:45 +0000
parents e30af4e78cd3
children
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2:e30af4e78cd3 3:e9b9c489aacc
1 <tool id="bamtools_split_tag" name="Split BAM by read tag value" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> 1 <tool id="bamtools_split_tag" name="Split BAM by read tag value" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
2 <description>into a dataset list collection</description> 2 <description>into a dataset list collection</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs"/>
6 <expand macro="requirements" /> 7 <expand macro="requirements" />
7 <command> 8 <command>
8 <![CDATA[ 9 <![CDATA[
9 #import re 10 #import re
10 #set $name = 'split_bam' + $re.sub('\W','_',$re.sub('\.bam$','',$input_bam.name)) 11 #set $name = 'split_bam' + $re.sub('\W','_',$re.sub('\.bam$','',$input_bam.name))