Mercurial > repos > iuc > bandage

diff test-data/out_standard.tab @ 5:d8b1027d6ce0 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
author iuc
date Sun, 12 Sep 2021 08:13:13 +0000
parents
children ddddce450736
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/out_standard.tab	Sun Sep 12 08:13:13 2021 +0000
@@ -0,0 +1,19 @@
+Node count:	455
+Edge count:	1061
+Smallest edge overlap (bp):	3348
+Largest edge overlap (bp):	4532
+Total length (bp):	2238438
+Total length no overlaps (bp):	268863
+Dead ends:	12
+Percentage dead ends:	1.31868%
+Connected components:	7
+Largest component (bp):	1960789
+Total length orphaned nodes (bp):	1960789
+N50 (bp):	4421
+Shortest node (bp):	736
+Lower quartile node (bp):	4290
+Median node (bp):	4404
+Upper quartile node (bp):	4460
+Longest node (bp):	147170
+Median depth:	1
+Estimated sequence length (bp):	297647