Mercurial > repos > iuc > bbtools_callvariants

view test-data/cv_output.txt @ 5:ee407fae3ccd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bbtools commit 35db9ac8668f3e376886ea09de63c87dce93e1ce
author iuc
date Tue, 30 May 2023 09:02:32 +0000
parents 18b91d72794b
children 7e041c120b96
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#fileformat
#BBMapVersion
#ploidy	2
#rarity	1.00000
#minAlleleFraction	0.1000
#reads	2207
#pairedReads	0
#properlyPairedReads	0
#readLengthAvg
#properPairRate
#totalQualityAvg
#mapqAvg
#reference
#scaf	start	stop	type	call	r1p	r1m	r2p	r2m	paired	lengthSum	mapq	mapqMax	baseq	baseqMax	edist	edistMax	id	idMax	cov	minusCov	nearbyVarCount	flagged	contigEndDist	phredScore	readCount	alleleFraction	revisedAF	strandRatio	baseqAvg	mapqAvg	edistAvg	identityAvg	edistScore	identityScore	qualityScore	pairedScore	biasScore	coverageScore	homopolymerScore	score
0	976326	976327	SUB	T
0	1501931	1501932	SUB	C
0	3380578	3380579	SUB	G
0	3646292	3646293	SUB	A