Mercurial > repos > iuc > bcftools_call
annotate test-data/annotate4.vcf @ 13:072f606e2e69 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 8ad854180e3be0934cdb1f0021886199a2edf9c3"
author | iuc |
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date | Fri, 05 Feb 2021 19:28:02 +0000 |
parents | 8959eda17fca |
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rev | line source |
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8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
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1 ##fileformat=VCFv4.2 |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
2 ##INFO=<ID=FR,Number=R,Type=Float,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
3 ##INFO=<ID=FA,Number=A,Type=Float,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
4 ##INFO=<ID=IA,Number=A,Type=Integer,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
5 ##INFO=<ID=IR,Number=R,Type=Integer,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
6 ##INFO=<ID=SA,Number=A,Type=String,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
7 ##INFO=<ID=SR,Number=R,Type=String,Description="test"> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
8 ##contig=<ID=1,assembly=b37,length=249250621> |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
9 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
10 #CHROM POS ID REF ALT QUAL FILTER INFO |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
11 1 1 . C T . . . |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
12 1 2 . C T,G . . FA=.,9.9;FR=.,9.9,.;IA=.,99;IR=.,99,.;SA=.,99;SR=.,99,. |
8959eda17fca
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
parents:
diff
changeset
|
13 1 3 . C A,T . . . |