Mercurial > repos > iuc > bcftools_call

comparison test-data/annots4.vcf @ 1:8959eda17fca draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
author iuc
date Wed, 06 Jul 2016 07:01:07 -0400
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0:a531317a3527 1:8959eda17fca
1 ##fileformat=VCFv4.2
2 ##INFO=<ID=FA,Number=A,Type=Float,Description="test">
3 ##INFO=<ID=FR,Number=R,Type=Float,Description="test">
4 ##INFO=<ID=IA,Number=A,Type=Integer,Description="test">
5 ##INFO=<ID=IR,Number=R,Type=Integer,Description="test">
6 ##INFO=<ID=SA,Number=A,Type=String,Description="test">
7 ##INFO=<ID=SR,Number=R,Type=String,Description="test">
8 ##contig=<ID=1,assembly=b37,length=249250621>
9 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
10 #CHROM POS ID REF ALT QUAL FILTER INFO
11 1 1 . C A,T,G . . FA=0,1.1,0;FR=1.1,0,2.2,0;IA=0,1,0;IR=1,0,2,0;SA=X,11,XXX;SR=1,XX,222,XXX
12 1 2 . C T,G . . FA=1.1,2.2;FR=1.1,2.2,3.3;IA=1,2;IR=1,2,3;SA=11,2;SR=111,22,3
13 1 3 . C T . . FA=1.1;FR=1.1,2.2;IA=1;IR=1,2;SA=11;SR=11,2