Mercurial > repos > iuc > bcftools_call
view test-data/merge.3.a.vcf @ 19:21687e35f066 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit cdb4558db96dd58f9f85267488a1e27ad813fca4
author | iuc |
---|---|
date | Thu, 29 Sep 2022 08:50:14 +0000 |
parents | 8959eda17fca |
children |
line wrap: on
line source
##fileformat=VCFv4.1 ##INFO=<ID=TEST,Number=1,Type=Integer,Description="Testing Tag"> ##FORMAT=<ID=TT,Number=A,Type=Integer,Description="Testing Tag, with commas and \"escapes\" and escaped escapes combined with \\\"quotes\\\\\""> ##INFO=<ID=DP4,Number=4,Type=Integer,Description="# high-quality ref-forward bases, ref-reverse, alt-forward and alt-reverse bases"> ##INFO=<ID=TR,Number=R,Type=Float,Description="Test tag"> ##INFO=<ID=TA,Number=A,Type=Float,Description="Test tag"> ##INFO=<ID=TG,Number=G,Type=Float,Description="Test tag"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> ##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood"> ##FILTER=<ID=q10,Description="Quality below 10"> ##FILTER=<ID=test,Description="Testing filter"> ##contig=<ID=1,assembly=b37,length=249250621> ##contig=<ID=2,assembly=b37,length=249250621> ##contig=<ID=3,assembly=b37,length=198022430> ##contig=<ID=4,assembly=b37,length=191154276> ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta ##readme=AAAAAA ##readme=BBBBBB ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes"> ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes"> ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> ##INFO=<ID=STR,Number=1,Type=String,Description="Test string type"> #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B 1 3000000 . C CCG 59.2 PASS AN=4;AC=2;TR=1,2;TA=1;TG=1,2,3 GT:GQ 0/1:245 0/1:245