Mercurial > repos > iuc > bcftools_concat

annotate test-data/concat.3.c.vcf @ 3:3503073269ec draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9df9b52baf62b70fbcfc3fbe965d7197d4e8738e
author iuc
date Tue, 31 Jan 2017 12:41:53 -0500
parents dda05d07d7d4
children
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dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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1 ##fileformat=VCFv4.0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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6 ##FILTER=<ID=q10,Description="Quality below 10">
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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7 ##contig=<ID=2,length=62435964>
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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9 2 280 . T A 246 PASS DP=10 GT 1|0 0|1
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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10 2 290 . T A 246 PASS DP=10 GT 1|0 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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11 2 300 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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12 2 310 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
iuc
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13 2 320 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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14 2 330 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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15 2 340 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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16 2 350 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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17 2 360 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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18 2 370 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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19 2 380 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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20 2 390 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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21 2 400 . T A 246 PASS DP=10 GT 0|1 1|0
dda05d07d7d4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit ef90c4602bdb83ea7455946c9d175ea27284e643
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22 2 410 . T A 246 PASS DP=10 GT 0|1 1|0