Mercurial > repos > iuc > bcftools_concat

comparison macros.xml @ 23:05f317e50e61 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 784611c9caf2680d41414ca2880b93a69d719701
author iuc
date Sun, 18 Aug 2024 10:18:33 +0000
parents abd489215f73
children
comparison
equal deleted inserted replaced
22:74303445f6bd 23:05f317e50e61
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.15.1</token> 2 <token name="@TOOL_VERSION@">1.15.1</token>
3 <token name="@VERSION_SUFFIX@">3</token> 3 <token name="@VERSION_SUFFIX@">4</token>
4 <token name="@PROFILE@">20.01</token> 4 <token name="@PROFILE@">20.01</token>
5 <xml name="bio_tools"> 5 <xml name="bio_tools">
6 <xrefs> 6 <xrefs>
7 <xref type="bio.tools">bcftools</xref> 7 <xref type="bio.tools">bcftools</xref>
8 </xrefs> 8 </xrefs>
434 #if $section.targets.targets_src == 'targets_file': 434 #if $section.targets.targets_src == 'targets_file':
435 #set $targets_path = 'targets_file.tab.gz' 435 #set $targets_path = 'targets_file.tab.gz'
436 bgzip -c "$section.targets.targets_file" > $targets_path && 436 bgzip -c "$section.targets.targets_file" > $targets_path &&
437 tabix -s 1 -b 2 -e 2 $targets_path && 437 tabix -s 1 -b 2 -e 2 $targets_path &&
438 #end if 438 #end if
439 #elif $tgts_sec.targets_file: 439 #elif $section.targets_file:
440 #set $targets_path = 'targets_file.tab.gz' 440 #set $targets_path = 'targets_file.tab.gz'
441 bgzip -c "$section.targets_file" > $targets_path && 441 bgzip -c "$section.targets_file" > $targets_path &&
442 tabix -s 1 -b 2 -e 2 $targets_path && 442 tabix -s 1 -b 2 -e 2 $targets_path &&
443 #end if 443 #end if
444 ]]> 444 ]]>