Mercurial > repos > iuc > bcftools_csq

annotate test-data/stats.b.vcf @ 5:fa67bc6d3b41 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author iuc
date Thu, 17 Oct 2019 02:39:57 -0400
parents 2a6c13f8cc5a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
1 ##fileformat=VCFv4.2
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
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3 ##contig=<ID=1,assembly=b37,length=249250621>
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
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6 1 1000 . G A . PASS . GT 0/1 0/0 0/0
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
diff changeset
7 1 1001 . G A . PASS . GT 0/0 0/0 0/0
2a6c13f8cc5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
iuc
parents:
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8 1 1002 . G A . PASS . GT 0/0 0/1 0/0