Mercurial > repos > iuc > bcftools_csq
view test-data/fixploidy.vcf @ 8:8899a6d50699 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit d5a01866d60f9775392420988259f1e79c464163"
| author | iuc |
|---|---|
| date | Thu, 14 Oct 2021 10:14:43 +0000 |
| parents | 2a6c13f8cc5a |
| children |
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##fileformat=VCFv4.1 ##contig=<ID=1,assembly=b37,length=249250621> ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta ##INFO=<ID=FLAG,Number=0,Type=Flag,Description="Test type"> ##INFO=<ID=IINT,Number=1,Type=Integer,Description="Test type"> ##INFO=<ID=IFLT,Number=1,Type=Float,Description="Test type"> ##INFO=<ID=ISTR,Number=1,Type=String,Description="Test type"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> ##FORMAT=<ID=FINT,Number=1,Type=Integer,Description="Test type"> ##FORMAT=<ID=FFLT,Number=1,Type=Float,Description="Test type"> ##FORMAT=<ID=FSTR,Number=1,Type=String,Description="Test type"> ##FILTER=<ID=q11,Description="Quality below 10"> #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C 1 3000001 xx C CT 11 PASS FLAG;IINT=11;IFLT=1.1;ISTR=xxx GT:FINT:FFLT:FSTR 0/0:11:1.1:xxx 0/0:11:1.1:x 0|0:11:1.1:x 1 3000002 . C CTT . . . GT ./. ./. .|. 1 3000003 xx C CTTT 11 q11 FLAG;IINT=.;IFLT=.;ISTR=. GT:FINT:FFLT:FSTR 0/0:.:.:. 0/0:.:.:. 0|0:.:.:. 1 3000004 xx C CTTTT 11 q11 FLAG;IINT=11;IFLT=1.1;ISTR=xxx GT:FINT:FFLT:FSTR 0/0:11:1.1:x 0/0:11:1.1:xxx 0|0:11:1.1:xxx