Mercurial > repos > iuc > bcftools_filter

view test-data/concat.3.c.vcf @ 9:b0b3865886db draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 942ca2971ae6a72e548fde6186c6408a1e236653
author iuc
date Mon, 29 Jul 2019 18:09:57 -0400
parents 061729be105d
children
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##fileformat=VCFv4.0
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FILTER=<ID=q10,Description="Quality below 10">
##contig=<ID=2,length=62435964>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B
2	280	.	T	A	246	PASS	DP=10	GT	1|0	0|1
2	290	.	T	A	246	PASS	DP=10	GT	1|0	1|0
2	300	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	310	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	320	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	330	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	340	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	350	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	360	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	370	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	380	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	390	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	400	.	T	A	246	PASS	DP=10	GT	0|1	1|0
2	410	.	T	A	246	PASS	DP=10	GT	0|1	1|0