Mercurial > repos > iuc > bcftools_isec
comparison bcftools_isec.xml @ 5:cfc3a6940b18 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author | iuc |
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date | Thu, 13 Apr 2017 17:45:57 -0400 |
parents | 71747e4a4aa1 |
children | 709dd8291b83 |
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4:71747e4a4aa1 | 5:cfc3a6940b18 |
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10 <command detect_errors="aggressive"><![CDATA[ | 10 <command detect_errors="aggressive"><![CDATA[ |
11 @PREPARE_ENV@ | 11 @PREPARE_ENV@ |
12 @PREPARE_INPUT_FILES@ | 12 @PREPARE_INPUT_FILES@ |
13 #set $section = $sec_restrict | 13 #set $section = $sec_restrict |
14 @PREPARE_TARGETS_FILE@ | 14 @PREPARE_TARGETS_FILE@ |
15 @PREPARE_REGIONS_FILE@ | |
15 | 16 |
16 bcftools @EXECUTABLE@ | 17 bcftools @EXECUTABLE@ |
17 | 18 |
18 ## Default section | 19 ## Default section |
19 #set $section = $sec_default | 20 #set $section = $sec_default |
33 @OUTPUT_TYPE@ | 34 @OUTPUT_TYPE@ |
34 @THREADS@ | 35 @THREADS@ |
35 | 36 |
36 ## Primary Input/Outputs | 37 ## Primary Input/Outputs |
37 @INPUT_FILES@ | 38 @INPUT_FILES@ |
38 > "$output_file" | 39 > '$output_file' |
39 | 40 |
40 ]]> | 41 ]]> |
41 </command> | 42 </command> |
42 <inputs> | 43 <inputs> |
43 <expand macro="macro_inputs" /> | 44 <expand macro="macro_inputs" /> |