Mercurial > repos > iuc > bcftools_mpileup

comparison bcftools_mpileup.xml @ 9:ce9396ddcb2b draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit d5a01866d60f9775392420988259f1e79c464163"
author iuc
date Thu, 14 Oct 2021 10:16:46 +0000
parents f65383c7ed49
children 6d7dc9a1bef3
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8:0dbff46d5a1b 9:ce9396ddcb2b
1 <?xml version='1.0' encoding='utf-8'?> 1 <?xml version='1.0' encoding='utf-8'?>
2 <tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@"> 2 <tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@">
3 <description>Generate VCF or BCF containing genotype likelihoods for one or multiple alignment (BAM or CRAM) files</description> 3 <description>Generate VCF or BCF containing genotype likelihoods for one or multiple alignment (BAM or CRAM) files</description>
4 <expand macro="bio_tools" />
4 <macros> 5 <macros>
5 <token name="@EXECUTABLE@">mpileup</token> 6 <token name="@EXECUTABLE@">mpileup</token>
6 <import>macros.xml</import> 7 <import>macros.xml</import>
7 <xml name="bam_flag_options"> 8 <xml name="bam_flag_options">
8 <option value="1">Read is paired</option> 9 <option value="1">Read is paired</option>